Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RIMS1

Gene Name Gene ID Reads Annotation
RIMS1 RIMS1 9










Genes with expression patterns similar to RIMS1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RIMS1 RIMS1 9 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. gltpb ENSDARG00000077962 5 2.743 - 1.000 - 0.743 - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
3. scg5 ENSDARG00000032126, ENSDARG00000077045 29 2.522 0.820 1.000 - - - 0.702 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
4. lbx1b ENSDARG00000018611 399 2.318 0.763 0.789 - - - 0.766 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
5. hoxc9a ENSDARG00000092809 18 2 - 1.000 - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
6. efemp2b_1 ENSDARG00000020811 77 2 1.000 - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
7. DKK3 DKK3 12 2 - 1.000 - - - 1.000 - - -
8. PLBD1 ENSDARG00000063313 1 2 1.000 - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
9. crispld1a ENSDARG00000077275 7 2 1.000 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
10. mfsd4a mfsd4a 179 2 - 1.000 - - - 1.000 - - -
11. WWC1 ENSDARG00000076041 26 2 1.000 - - 1.000 - - - - - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
12. si:dkey-97l20.5 si:dkey-97l20.5 33 2 - 1.000 - - - 1.000 - - -
13. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 2 1.000 1.000 - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
14. KHNYN ENSDARG00000092488 10 2 1.000 - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
15. GRIK3 ENSDARG00000077715 178 2 1.000 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
16. lmx1a ENSDARG00000020354 111 2 1.000 1.000 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
17. rbfox3l rbfox3l 34 2 - 1.000 - - - 1.000 - - -
18. TGM1 ENSDARG00000017799 3 1.989 - 1.000 - - 0.989 - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
19. tnr ENSDARG00000020771 20 1.971 1.000 - - - - 0.971 - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
20. HIST1H2BA ENSDARG00000116654 10 1.958 - 1.000 - - 0.958 - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
21. TMEM74 26 1.956 - 1.000 - - - 0.956 - - - transmembrane protein 74, transcript variant X3
22. sox12 ENSDARG00000025847 681 1.895 0.895 1.000 - - - - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
23. rgs7 rgs7 208 1.892 0.946 0.946 - - - - - - -
24. tecrl2 tecrl2 11 1.883 - 1.000 - - - 0.883 - - -
25. C18H15orf59 C18H15orf59 80 1.872 - 1.000 - - - 0.872 - - -
26. lingo1b ENSDARG00000035899 86 1.851 - 1.000 - - - 0.851 - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
27. ntng1a ENSDARG00000014973 23 1.849 1.000 - - - - 0.849 - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
28. st8sia1_1 ENSDARG00000098221 16 1.849 - 1.000 - - - 0.849 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
29. tmem91 ENSDARG00000068456 81 1.84 0.840 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
30. si:ch73-141f17.1 si:ch73-141f17.1 1 1.83 - 1.000 - - - - - 0.830 -
31. si:dkey-266f7.10 ENSDARG00000086613 7 1.83 - - - - - 1.000 - 0.830 - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
32. GJD2_1 GJD2_1 3045 1.82 0.820 1.000 - - - - - - -
33. nkx1.2lb ENSDARG00000099427 220 1.81 0.929 0.881 - - - - - - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
34. NPDC1 NPDC1 126 1.802 1.000 0.802 - - - - - - -
35. uckl1a ENSDARG00000001686 21 1.77 - 1.000 - - - - - 0.770 - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
36. pif1 ENSDARG00000020289 216 1.764 0.764 1.000 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
37. GPC6_1 GPC6_1 34 1.76 - 1.000 - - - 0.760 - - -
38. CCSAP CCSAP 147 1.754 1.000 - - - - 0.754 - - -
39. ptk2ba ENSDARG00000022841 19 1.753 1.000 - 0.753 - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
40. si:dkey-119g10.4 si:dkey-119g10.4 7 1.743 - 1.000 - 0.743 - - - - -
41. gpr19 ENSDARG00000102226 17 1.743 1.000 - - 0.743 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
42. nfixb ENSDARG00000061836 7 1.743 1.000 - - 0.743 - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
43. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1.743 1.000 - - 0.743 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
44. ttc6 ENSDARG00000104125 7 1.743 - 1.000 - 0.743 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
45. IMPG2 IMPG2 1 1.743 1.000 - - 0.743 - - - - -
46. arl11l arl11l 31 1.743 - 1.000 - 0.743 - - - - -
47. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1.743 - 1.000 - - - 0.743 - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
48. BRSK2_2 BRSK2_2 3 1.743 - - - 0.743 - 1.000 - - -
49. ydjc ENSDARG00000062655 5 1.743 1.000 - - 0.743 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
50. nfixa ENSDARG00000043226 14 1.743 - 1.000 - 0.743 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
51. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1.743 - - - 0.743 - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
52. zgc:173713 17 1.743 - 1.000 - 0.743 - - - - - zgc:173713, transcript variant X2
53. loxhd1b ENSDARG00000074638 6 1.743 - - - 0.743 - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
54. si:dkey-40j3.3 ENSDARG00000103597 5 1.743 1.000 - - 0.743 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
55. si:ch73-167f18.4 si:ch73-167f18.4 9 1.715 0.715 - - - - 1.000 - - -
56. EGLN1 EGLN1 62 1.705 0.946 0.759 - - - - - - -
57. FRMPD1 34 1.704 - 1.000 - - - 0.704 - - - FERM and PDZ domain containing 1, transcript variant X3
58. CDH7 16 1.704 1.000 0.704 - - - - - - - cadherin 7, type 2, transcript variant X1
59. C10H5orf63 C10H5orf63 17 1.702 - 1.000 - - - 0.702 - - -
60. si:ch211-81a5.8 ENSDARG00000070972 59 1.681 - - - - 0.859 0.822 - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
61. nts ENSDARG00000057887 5 1.677 - - - 0.743 0.934 - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
62. gnb5b ENSDARG00000055377 98 1.656 0.758 0.898 - - - - - - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
63. klhdc8b ENSDARG00000090787 33 1.641 - - - 0.903 - 0.738 - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
64. nek1 ENSDARG00000022350 158 1.64 - 0.802 - - - 0.838 - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
65. si:dkey-190g11.3 ENSDARG00000025914 49 1.637 0.821 0.816 - - - - - - - si:dkey-190g11.3 [Source:ZFIN;Acc:ZDB-GENE-081104-341]
66. si:ch211-14c7.2 ENSDARG00000094522 369 1.613 - 0.893 - - - 0.720 - - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
67. npffr1l2 ENSDARG00000062631 127 1.596 0.799 0.797 - - - - - - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
68. secisbp2 ENSDARG00000073892 79 1.587 - 0.704 - - - 0.883 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
69. pax6b ENSDARG00000045936 349 1.566 0.822 - - - - 0.744 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
70. cacng2a ENSDARG00000032565 99 1.56 0.705 - - - - 0.855 - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
71. si:ch211-10m5.3 si:ch211-10m5.3 10 1.545 0.715 - - - - - - 0.830 -
72. EFCAB6 ENSDARG00000020735 34 1.541 - 0.816 - - - 0.725 - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
73. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.541 - 0.767 - - - 0.774 - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
74. dbx2 2971 1.541 0.760 0.781 - - - - - - - developing brain homeobox 2
75. efna3b ENSDARG00000098295 319 1.536 0.749 - - - - 0.787 - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
76. KCNB2 ENSDARG00000088842 35 1.515 - 0.806 - - 0.709 - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
77. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.514 0.751 0.763 - - - - - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
78. csf1b ENSDARG00000068263 248 1.509 0.795 0.714 - - - - - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
79. si:dkey-265e15.5 ENSDARG00000103229 6 1.507 0.764 - - 0.743 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
80. adck4 7 1.507 0.764 - - 0.743 - - - - - aarF domain containing kinase 4, transcript variant X2
81. ncam1a ENSDARG00000056181 193 1.478 0.744 - - - - 0.734 - - - neural cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-990415-31]
82. pus1 ENSDARG00000045562 114 1.458 - - - - - 0.742 - - 0.716 pseudouridylate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-26]
83. CABZ01071530.2 CABZ01071530.2 47 1.419 0.715 0.704 - - - - - - -
84. slco4a1 ENSDARG00000075948 74 1 1.000 - - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
85. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
86. si:dkey-272j9.2 si:dkey-272j9.2 91 1 - 1.000 - - - - - - -
87. si:ch211-198c19.1 ENSDARG00000089333 3 1 - 1.000 - - - - - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
88. CHRNA4 CHRNA4 1 1 - - - - 1.000 - - - -
89. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
90. hspb15 ENSDARG00000078411 6 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
91. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
92. ENSDARG00000088231 ENSDARG00000088231 0 1 - 1.000 - - - - - - -
93. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
94. tshb tshb 7 1 - 1.000 - - - - - - -
95. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
96. FKBPL ENSDARG00000095322 82 1 1.000 - - - - - - - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
97. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
98. hip1r hip1r 10 1 - - - - - 1.000 - - -
99. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
100. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]

There are 1175 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA