Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RIF1

Gene Name Gene ID Reads Annotation
RIF1 ENSGALG00000012484 2248 replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]











Genes with expression patterns similar to RIF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RIF1 ENSGALG00000012484 2248 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
2. FGF12 ENSGALG00000036971 2631 0.913 - - - - - - - - 0.913 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
3. SETX ENSGALG00000003661 701 0.909 - - - - - - - - 0.909 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
4. VIPAS39 ENSGALG00000010459 2090 0.909 - - - - - - - - 0.909 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
5. HAND1 ENSGALG00000035104 2351 0.893 - - - - - - - - 0.893 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
6. RNF207 2949 0.889 - - - - - - - - 0.889 - ring finger protein 207, transcript variant X1
7. ANKIB1 ENSGALG00000031917 109 0.887 - - - - - - - - 0.887 - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]
8. FMR1 ENSGALG00000009177 561 0.881 - - - - - - - - 0.881 - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
9. OSBPL11 ENSGALG00000012059 2523 0.881 - - - - - - - - 0.881 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
10. HDX ENSGALG00000007041 179 0.88 - - - - - - - - 0.880 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
11. NIF3L1 ENSGALG00000008226 1500 0.88 - - - - - - - - 0.880 - NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
12. ASH1L ENSGALG00000014638 803 0.878 - - - - - - - - 0.878 - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
13. HKDC1 ENSGALG00000021039 134 0.877 - - - - - - - - 0.877 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
14. AKIRIN2 ENSGALG00000015791 3858 0.875 - - - - - - - 0.875 - - akirin 2 [Source:NCBI gene;Acc:421821]
15. KIAA0232 ENSGALG00000015538 717 0.874 - - - - - - - - 0.874 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
16. IFT81 ENSGALG00000003854 2534 0.872 - - - - - - - - 0.872 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
17. RNF152 ENSGALG00000028822 291 0.87 - - - - - - - - 0.870 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
18. CBX1 ENSGALG00000033926 2436 0.866 - - - - - - - - 0.866 - chromobox 1 [Source:NCBI gene;Acc:374237]
19. G6PC2 ENSGALG00000010899 260 0.866 - - - - - - - - 0.866 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
20. ANO1 ENSGALG00000041808 5149 0.862 - - - - - - - - 0.862 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
21. MT-ND4L MT-ND4L 12537 0.86 - - - - - - - - 0.860 -
22. ITSN1 ENSGALG00000036677 5727 0.86 - - - - - - - 0.860 - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
23. ZMYM2 ENSGALG00000017139 3747 0.859 - - - - - - - - 0.859 - zinc finger MYM-type containing 2, transcript variant X10
24. MED13 ENSGALG00000005230 1504 0.856 - - - - - - - - 0.856 - mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
25. DNAJB14 ENSGALG00000014026 598 0.852 - - - - - - - - 0.852 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
26. PRDM4 ENSGALG00000012619 876 0.851 - - - - - - - - 0.851 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
27. ELP3 ENSGALG00000016624 4483 0.85 - - - - - - - - 0.850 - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
28. PTPRU ENSGALG00000031440 1357 0.845 - - - - - - - - 0.845 - protein tyrosine phosphatase, receptor type U [Source:NCBI gene;Acc:395153]
29. RBMS1 ENSGALG00000011132 569 0.845 - - - - - - - - 0.845 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
30. FILIP1L ENSGALG00000015271 644 0.842 - - - - - - - - 0.842 - filamin A interacting protein 1 like, transcript variant X8
31. VPS51 ENSGALG00000004166 204 0.835 - - - - - - - - 0.835 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
32. IFT27 ENSGALG00000042990 221 0.833 - - - - - - - - 0.833 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
33. ENOX2 ENSGALG00000004079 4055 0.832 - - - - - - - - 0.832 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
34. DACT1 ENSGALG00000012023 1008 0.831 - - - - - - - - 0.831 - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
35. SNRK ENSGALG00000039920 174 0.831 - - - - - - - - 0.831 - SNF related kinase [Source:NCBI gene;Acc:420675]
36. SFMBT2 ENSGALG00000009279 125 0.831 - - - - - - - - 0.831 - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
37. RTCA 1995 0.829 - - - - - - - 0.829 - - RNA 3'-terminal phosphate cyclase
38. ENSGALG00000021611 ENSGALG00000021611 1551 0.828 - - - - - - - - 0.828 -
39. NEIL1 ENSGALG00000001586 2292 0.827 - - - - - - - - 0.827 - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
40. SRRD ENSGALG00000005614 234 0.826 - - - - - - - - 0.826 - SRR1 domain containing [Source:NCBI gene;Acc:416908]
41. PHTF2 ENSGALG00000008335 722 0.826 - - - - - - - - 0.826 - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
42. MYC ENSGALG00000033631 16949 0.825 - - - - - - - - 0.825 - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
43. VCPIP1 ENSGALG00000042883 139 0.825 - - - - - - - - 0.825 - valosin containing protein interacting protein 1 [Source:NCBI gene;Acc:428359]
44. AIDA ENSGALG00000009426 219 0.822 - - - - - - - - 0.822 - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
45. SDR42E1 ENSGALG00000005456 586 0.821 - - - - - - - - 0.821 - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
46. BPHL ENSGALG00000029659 501 0.82 - - - - - - - - 0.820 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
47. ELN 765 0.818 - - - - - - - - 0.818 - elastin, transcript variant X24
48. TADA2A ENSGALG00000005452 2706 0.818 - - - - - - - - 0.818 - transcriptional adaptor 2A [Source:NCBI gene;Acc:417656]
49. IARS ENSGALG00000004813 12936 0.816 - - - - - - - - 0.816 - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
50. NCOA2 ENSGALG00000036017 256 0.816 - - - - - - - - 0.816 - nuclear receptor coactivator 2, transcript variant X9
51. ERO1LB ERO1LB 2910 0.813 - - - - - - - - 0.813 -
52. RYBP ENSGALG00000033025 3019 0.813 - - - - - - - - 0.813 - RING1 and YY1 binding protein
53. GALNT14 ENSGALG00000009078 126 0.811 - - - - - - - - 0.811 - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
54. UNC93B1 ENSGALG00000039347 342 0.811 - - - - - - - 0.811 - - unc-93 homolog B1 (C. elegans), transcript variant X6
55. SNX3 ENSGALG00000015304 1631 0.811 - - - - - - - - 0.811 - sorting nexin 3 [Source:NCBI gene;Acc:421772]
56. GCH1 ENSGALG00000012200 445 0.81 - - - - - - - 0.810 - - GTP cyclohydrolase 1 [Source:NCBI gene;Acc:396146]
57. CUL1 ENSGALG00000036941 317 0.81 - - - - - - - - 0.810 - cullin 1 [Source:HGNC Symbol;Acc:HGNC:2551]
58. SLC29A1 ENSGALG00000010182 1522 0.81 - - - - - - - 0.810 - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
59. ALDH5A1 ENSGALG00000032544 4924 0.809 - - - - - - - - 0.809 - aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
60. GALNT9 ENSGALG00000002242 219 0.808 - - - - - - - - 0.808 - polypeptide N-acetylgalactosaminyltransferase 9 [Source:HGNC Symbol;Acc:HGNC:4131]
61. BTK ENSGALG00000004958 272 0.806 - - - - - - - - 0.806 - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
62. NAALAD2 202 0.805 - - - - - - - 0.805 - - N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
63. PAN3 ENSGALG00000017092 5387 0.805 - - - - - - - - 0.805 - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
64. BFAR ENSGALG00000003111 1778 0.805 - - - - - - - - 0.805 - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
65. FZD6 ENSGALG00000030626 3336 0.803 - - - - - - - - 0.803 - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
66. OSBPL5 ENSGALG00000006401 3555 0.801 - - - - - - - - 0.801 - oxysterol binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:16392]
67. KCNJ11 ENSGALG00000020505 196 0.801 - - - - - - - - 0.801 - potassium voltage-gated channel subfamily J member 11 [Source:HGNC Symbol;Acc:HGNC:6257]
68. GAPVD1 ENSGALG00000000993 1988 0.799 - - - - - - - - 0.799 - GTPase activating protein and VPS9 domains 1 [Source:NCBI gene;Acc:417095]
69. AGA ENSGALG00000010716 2299 0.799 - - - - - - - 0.799 - - aspartylglucosaminidase [Source:NCBI gene;Acc:422558]
70. PRPS2 ENSGALG00000016592 165 0.798 - - - - - - - - 0.798 - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
71. FAM188B 2097 0.797 - - - - - - - - 0.797 - family with sequence similarity 188 member B
72. NADK2 ENSGALG00000003558 79 0.796 - - - - - - - 0.796 - - NAD kinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26404]
73. DUSP10 ENSGALG00000009450 1041 0.795 - - - - - - - - 0.795 - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
74. SPINT1 ENSGALG00000008469 5735 0.795 - - - - - - - - 0.795 - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
75. UBXN2A ENSGALG00000016497 2444 0.793 - - - - - - - - 0.793 - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
76. FAM161B ENSGALG00000010196 672 0.793 - - - - - - - - 0.793 - FAM161B, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:19854]
77. METTL5 ENSGALG00000009676 3252 0.793 - - - - - - - - 0.793 - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
78. TBC1D5 ENSGALG00000011251 287 0.793 - - - - - - - - - 0.793 TBC1 domain family member 5 [Source:HGNC Symbol;Acc:HGNC:19166]
79. APP ENSGALG00000015770 9438 0.792 - - - - - - - - 0.792 - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
80. IBTK ENSGALG00000015864 3154 0.791 - - - - - - - - 0.791 - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
81. SGCE ENSGALG00000009670 3070 0.791 - - - - - - - - 0.791 - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
82. DNAJB4 ENSGALG00000008916 68 0.79 - - - - - - - 0.790 - - DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
83. GSTCD ENSGALG00000010573 1409 0.79 - - - - - - - - 0.790 - glutathione S-transferase C-terminal domain containing [Source:HGNC Symbol;Acc:HGNC:25806]
84. RBM45 ENSGALG00000009202 6057 0.789 - - - - - - - - 0.789 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
85. ENSGALG00000024348 ENSGALG00000024348 254 0.789 - - - - - - - - 0.789 -
86. NUDT14 ENSGALG00000028940 3795 0.789 - - - - - - - 0.789 - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
87. MAP4 36 0.789 - - - - - - - - 0.789 - microtubule associated protein 4, transcript variant X12
88. TMEM169 ENSGALG00000011493 1238 0.787 - - - - - - - - 0.787 - transmembrane protein 169 [Source:HGNC Symbol;Acc:HGNC:25130]
89. ADAM9 ENSGALG00000003398 1299 0.785 - - - - - - - - 0.785 - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
90. ADNP ENSGALG00000007989 1930 0.784 - - - - - - - - 0.784 - activity dependent neuroprotector homeobox [Source:HGNC Symbol;Acc:HGNC:15766]
91. TH1L TH1L 1358 0.784 - - - - - - - - 0.784 -
92. HMGXB3 ENSGALG00000005770 119 0.784 - - - - - - - - 0.784 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
93. MRAS ENSGALG00000011592 1264 0.783 - - - - - - - 0.783 - - muscle RAS oncogene homolog [Source:NCBI gene;Acc:395149]
94. APLNR ENSGALG00000004841 176 0.782 - - - - - - - 0.782 - - apelin receptor [Source:HGNC Symbol;Acc:HGNC:339]
95. EXOC3L1 ENSGALG00000001702 1355 0.782 - - - - - - - - 0.782 - exocyst complex component 3 like 1 [Source:HGNC Symbol;Acc:HGNC:27540]
96. ENSGALG00000016701 ENSGALG00000016701 418 0.782 - - - - - - - - 0.782 -
97. PODN ENSGALG00000021869 71 0.779 - - - - - - - 0.779 - - podocan [Source:HGNC Symbol;Acc:HGNC:23174]
98. CSPP1 1756 0.779 - - - - - - - - 0.779 - centrosome and spindle pole associated protein 1
99. FTSJ2 FTSJ2 2951 0.778 - - - - - - - - 0.778 -
100. CDC123 ENSGALG00000014038 1418 0.778 - - - - - - - - 0.778 - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]

There are 182 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA