Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RHOT1

Gene Name Gene ID Reads Annotation
RHOT1 ENSGALG00000003397 5149 ras homolog family member T1 [Source:NCBI gene;Acc:417410]











Genes with expression patterns similar to RHOT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RHOT1 ENSGALG00000003397 5149 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
2. ASAP2 ENSGALG00000016419 1393 2.713 - - - - 0.978 - 0.772 - - 0.963 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
3. RPL22 ENSGALG00000000719 74238 2.53 - - - - 0.921 - 0.777 - - 0.832 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
4. PACSIN3 ENSGALG00000008231 5423 2.493 - - 0.791 - - - - 0.965 - 0.737 protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
5. VAPB ENSGALG00000007549 15511 2.487 - - - - - - 0.748 0.907 - 0.832 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
6. TBPL1 ENSGALG00000013981 3710 2.434 - - 0.789 - - - 0.817 - - 0.828 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
7. TXNDC12 ENSGALG00000010569 13822 2.421 - - 0.789 - - - 0.754 - - 0.878 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
8. SYNCRIP ENSGALG00000015830 30555 2.3 - - 0.744 - 0.718 - - - - 0.838 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
9. RBM6 ENSGALG00000035578 1690 1.956 - - - - 0.978 - - 0.978 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
10. MB21D1 2460 1.94 - - - - - - - 0.974 - 0.966 Mab-21 domain containing 1
11. LGALS1 ENSGALG00000012420 13993 1.922 - - - - 0.967 - - 0.955 - - galectin 1 [Source:NCBI gene;Acc:396491]
12. NARS ENSGALG00000040506 9506 1.901 - - - - 0.928 - - - - 0.973 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
13. ANKRD17 ENSGALG00000011642 3192 1.897 - - - - - - - 0.976 - 0.921 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
14. KIF11 ENSGALG00000030597 5528 1.895 - - - - 0.967 - - - - 0.928 kinesin family member 11 [Source:NCBI gene;Acc:423809]
15. PRDM4 ENSGALG00000012619 876 1.865 - - - - 0.979 - - - - 0.886 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
16. ACAP2 ENSGALG00000007040 4182 1.864 - - - - - - - 0.983 - 0.881 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
17. LOC426385 ENSGALG00000026301 2703 1.862 - - - - 0.970 - - - - 0.892 serine/threonine kinase 35-like, transcript variant X2
18. C9orf85 ENSGALG00000026001 4110 1.799 - - - - 0.970 - 0.829 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
19. DENR ENSGALG00000003795 30805 1.789 - - - - 0.958 - - 0.831 - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
20. B3GALTL B3GALTL 4128 1.782 - - 0.807 - - - - - - 0.975
21. SDCBP ENSGALG00000015436 1228 1.78 - - 0.802 - 0.978 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
22. CCDC132 CCDC132 2632 1.78 - - - - 0.967 - 0.813 - - -
23. CASP8AP2 ENSGALG00000015611 5657 1.778 - - - - - - 0.801 - - 0.977 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
24. UFD1L 12964 1.774 - - - - - - - 0.949 - 0.825 ubiquitin fusion degradation 1 like (yeast)
25. MAK16 ENSGALG00000001663 7455 1.774 - - 0.793 - - - - 0.981 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
26. SVIL ENSGALG00000007331 12032 1.773 - - - - 0.859 - - - - 0.914 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
27. CHMP5 ENSGALG00000013160 13347 1.771 - - - - 0.901 - - - - 0.870 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
28. CPSF2 ENSGALG00000010783 5236 1.761 - - - - - - - 0.839 - 0.922 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
29. USMG5 ENSGALG00000034645 33263 1.745 - - - - 0.900 - - - - 0.845 up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
30. CCT8 ENSGALG00000015821 12161 1.745 - - 0.783 - - - - - - 0.962 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
31. LZIC ENSGALG00000002616 9052 1.74 - - 0.761 - 0.979 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
32. CDCA7 ENSGALG00000040833 7484 1.738 - - - - 0.963 - - - - 0.775 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
33. FRMD3 ENSGALG00000012577 999 1.733 - - 0.769 - - - - - - 0.964 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
34. UBE2D3 ENSGALG00000012311 39831 1.722 - - - - 0.929 - - 0.793 - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
35. PWP1 ENSGALG00000012631 10536 1.717 - - - - - - 0.871 - - 0.846 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
36. TMEM128 ENSGALG00000014992 6567 1.698 - - 0.743 - - - - - - 0.955 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
37. ARL13B ENSGALG00000015412 2968 1.696 - - 0.793 - - - - - - 0.903 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
38. GPX8 ENSGALG00000026704 4497 1.695 - - - - - - 0.814 - - 0.881 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
39. FREM3 ENSGALG00000020561 1824 1.687 - - - - - - 0.738 - - 0.949 FRAS1 related extracellular matrix 3
40. SRP19 ENSGALG00000000218 14207 1.676 - - - - 0.958 - 0.718 - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
41. RER1 ENSGALG00000021683 9074 1.675 - - - - - - 0.723 - - 0.952 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
42. PGD ENSGALG00000002797 15115 1.666 - - - - - - 0.735 - - 0.931 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
43. ZNF395 ENSGALG00000034140 1868 1.664 - - 0.742 - - - - - - 0.922 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
44. USP47 ENSGALG00000005569 4813 1.66 - - 0.789 - - - 0.871 - - - ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]
45. ERLIN1 ENSGALG00000003308 6427 1.655 - - - - - - 0.710 0.945 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
46. ZNF276 ENSGALG00000000513 2410 1.652 - - 0.772 - - - - 0.880 - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
47. ATG16L1 ENSGALG00000001619 3562 1.651 - - - - 0.740 - - - - 0.911 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
48. DDOST ENSGALG00000010073 18707 1.642 - - - - 0.892 - - - - 0.750 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
49. ENSGALG00000026433 ENSGALG00000026433 14463 1.638 - - - - - - 0.719 - - 0.919
50. NLGN1 ENSGALG00000040938 651 1.628 - - 0.761 - - - - - - 0.867 neuroligin 1 [Source:NCBI gene;Acc:424980]
51. TOP3B ENSGALG00000030051 5953 1.627 - - - - - - - 0.838 - 0.789 DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
52. PNRC2 ENSGALG00000004122 19228 1.624 - - - - - - - 0.769 - 0.855 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
53. QSER1 ENSGALG00000012030 4490 1.622 - - - - - - 0.806 - - 0.816 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
54. SERINC1 ENSGALG00000014868 12484 1.618 - - - - - - 0.771 - - 0.847 serine incorporator 1 [Source:NCBI gene;Acc:421722]
55. NRSN1 ENSGALG00000037811 11424 1.616 - - - - - - - 0.805 - 0.811 neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
56. MYEOV2 MYEOV2 5155 1.611 - - - - - - 0.794 - - 0.817
57. SEC14L1 ENSGALG00000001684 2776 1.606 - - 0.720 - - - - - - 0.886 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
58. TMA16 ENSGALG00000009501 6651 1.579 - - - - - - 0.829 - - 0.750 translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
59. NIPSNAP3L ENSGALG00000027334 7514 1.565 - - 0.726 - - - 0.839 - - - nipsnap homolog 3-like
60. ADIPOR2 ENSGALG00000035533 6523 1.559 - - - - - - 0.767 - - 0.792 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
61. PPP2R5C ENSGALG00000029996 5759 1.546 - - - - - - 0.719 - - 0.827 protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
62. DECR1 ENSGALG00000036990 6360 1.545 - - 0.757 - - - 0.788 - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
63. ELOVL5 ENSGALG00000016314 18163 1.538 - - - - 0.808 - 0.730 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
64. DDX18 ENSGALG00000012147 12463 1.537 - - 0.827 - - - - - - 0.710 DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
65. GNMT ENSGALG00000043290 3288 1.521 - - 0.783 - - - 0.738 - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
66. TMEM38B ENSGALG00000027472 2465 1.505 - - 0.765 - - - 0.740 - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
67. ZNF830 ENSGALG00000013156 3896 1.495 - - 0.762 - - - 0.733 - - - zinc finger protein 830
68. UFL1 ENSGALG00000015580 3845 1.493 - - - - - - 0.761 - - 0.732 UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
69. U3 U3 1604 1.487 - - 0.725 - - - - - - 0.762
70. LMO4 ENSGALG00000006252 3686 1.486 - - 0.760 - - - 0.726 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
71. EIF2B2 ENSGALG00000010301 10772 1.48 - - - - - - 0.723 - - 0.757 eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
72. MT-ND4L MT-ND4L 12537 1.471 - - - - - - 0.748 - - 0.723
73. RPS24 ENSGALG00000004871 173117 1.469 - - 0.759 - - - - - - 0.710 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
74. SDHA ENSGALG00000013167 6509 1.467 - - 0.742 - - - 0.725 - - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
75. ENSGALG00000028938 ENSGALG00000028938 18616 1.456 - - - - 0.711 - - - - 0.745
76. WDR82 ENSGALG00000025904 4783 1.444 - - - - - - 0.727 - - 0.717 WD repeat domain 82 [Source:NCBI gene;Acc:415942]
77. RIOK1 ENSGALG00000012795 4658 0.988 - - - - - - - 0.988 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
78. H2AFY_1 ENSGALG00000040141 4895 0.987 - - - - - - - 0.987 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
79. VPS13B 2293 0.986 - - - - - - - 0.986 - - vacuolar protein sorting 13 homolog B
80. LOC770492 ENSGALG00000027778 695 0.986 - - - - - - - - - 0.986 ras-related and estrogen-regulated growth inhibitor-like
81. MGA 1911 0.985 - - - - - - - - - 0.985 MGA, MAX dimerization protein, transcript variant X15
82. KDM4B ENSGALG00000034592 6711 0.985 - - - - - - - 0.985 - - lysine demethylase 4B, transcript variant X8
83. OMA1 ENSGALG00000010861 3328 0.985 - - - - - - - 0.985 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
84. PPT1 ENSGALG00000003936 2540 0.984 - - - - - - - 0.984 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
85. SSR2 ENSGALG00000000764 32190 0.984 - - - - - - - - - 0.984 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
86. PRORSD1P ENSGALG00000034854 2924 0.983 - - - - - - - 0.983 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
87. 5S_2 5S_2 58 0.982 - - - - - - - - - 0.982
88. SUV39H2 ENSGALG00000013920 4360 0.982 - - - - - - - - - 0.982 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
89. EED ENSGALG00000014060 6467 0.982 - - - - - - - 0.982 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
90. KCTD9 ENSGALG00000000275 3455 0.982 - - - - - - - 0.982 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
91. IL10R2 IL10R2 72 0.982 - - - - - - - - - 0.982
92. KIAA1432 KIAA1432 1792 0.982 - - - - - - - 0.982 - -
93. F2RL2 ENSGALG00000023379 1049 0.981 - - - - - - - - - 0.981 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
94. CXADR ENSGALG00000015701 96 0.981 - - - - - - - - - 0.981 coxsackie virus and adenovirus receptor, transcript variant X2
95. ADD1 ENSGALG00000015664 6828 0.981 - - - - - - - 0.981 - - adducin 1 [Source:NCBI gene;Acc:422882]
96. QARS ENSGALG00000029980 4207 0.981 - - - - - - - 0.981 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
97. FAM190B FAM190B 165 0.981 - - - - - - - - - 0.981
98. CPNE2 ENSGALG00000001316 236 0.981 - - - - - - - - - 0.981 copine 2 [Source:NCBI gene;Acc:415646]
99. PGS1 ENSGALG00000007181 3187 0.981 - - - - - - - 0.981 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
100. ZNF6 ZNF6 138 0.981 - - - - - - - - - 0.981

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA