Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RHOF

Gene Name Gene ID Reads Annotation
RHOF ENSGALG00000039724 8 ras homolog family member F, filopodia associated [Source:NCBI gene;Acc:416848]











Genes with expression patterns similar to RHOF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RHOF ENSGALG00000039724 8 3 - - 1.000 1.000 - - - - - 1.000 ras homolog family member F, filopodia associated [Source:NCBI gene;Acc:416848]
2. CYP7B1 ENSGALG00000029435 3 1 - - - 1.000 - - - - - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
3. ENSGALG00000001478 ENSGALG00000001478 23 1 - - - 1.000 - - - - - -
4. PGAP3 ENSGALG00000022030 87 1 - - - 1.000 - - - - - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
5. DOCK2 ENSGALG00000002080 13 1 - - - 1.000 - - - - - - dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]
6. FAM194A 1 1 - - - 1.000 - - - - - - family with sequence similarity 194, member A, transcript variant X2
7. PGAP1 ENSGALG00000030789 3 1 - - - 1.000 - - - - - - post-GPI attachment to proteins 1, transcript variant X3
8. TRPM1 ENSGALG00000003849 5 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
9. ENSGALG00000019430 ENSGALG00000019430 32 1 - - - 1.000 - - - - - -
10. SIX2 ENSGALG00000023303 2 1 - - - 1.000 - - - - - - SIX homeobox 2 [Source:NCBI gene;Acc:724086]
11. EMID1 4 1 - - - 1.000 - - - - - - EMI domain containing 1, transcript variant X5
12. MEIG1 ENSGALG00000000451 12 1 - - - 1.000 - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
13. CYR61 ENSGALG00000008661 43 1 - - - 1.000 - - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
14. LRP3 ENSGALG00000004853 13 1 - - - 1.000 - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
15. C2orf62 C2orf62 9 1 - - - 1.000 - - - - - -
16. MREG ENSGALG00000003758 3 1 - - - 1.000 - - - - - - melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
17. PLA2G1BL ENSGALG00000007236 4 1 - - - 1.000 - - - - - - phospholipase A2, major isoenzyme-like
18. ENSGALG00000023695 ENSGALG00000023695 2 1 - - - 1.000 - - - - - -
19. AIRE AIRE 3 1 - - - 1.000 - - - - - -
20. ASPR ASPR 1 1 - - - 1.000 - - - - - -
21. SEC31B ENSGALG00000005722 13 1 - - - 1.000 - - - - - - SEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]
22. ANPEP ENSGALG00000027501 234 1 - - - 1.000 - - - - - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
23. TINAG ENSGALG00000016300 5 0.932 - - - 0.932 - - - - - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
24. EDRF1 26 0.928 - - 0.928 - - - - - - - erythroid differentiation regulatory factor 1
25. SETD6 ENSGALG00000002247 6 0.928 - - - 0.928 - - - - - - SET domain containing 6 [Source:NCBI gene;Acc:101750922]
26. PCDHA11 58 0.918 - - - 0.918 - - - - - - protocadherin alpha 11
27. ENSGALG00000012195 ENSGALG00000012195 1 0.918 - - - 0.918 - - - - - -
28. CRELD1 ENSGALG00000042387 428 0.891 - - - 0.891 - - - - - - cysteine rich with EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:14630]
29. CAPN8 ENSGALG00000009382 8 0.891 - - - 0.891 - - - - - - calpain 8 [Source:HGNC Symbol;Acc:HGNC:1485]
30. SRD5A2 ENSGALG00000010625 23 0.891 - - - - - - - - - 0.891 steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
31. ENSGALG00000009794 ENSGALG00000009794 5 0.885 - - - 0.885 - - - - - -
32. U4atac U4atac 23 0.879 - - - - - - - - - 0.879
33. ENSGALG00000010590 ENSGALG00000010590 6 0.878 - - 0.878 - - - - - - -
34. TP63 ENSGALG00000007324 6 0.878 - - 0.878 - - - - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
35. ENSGALG00000013079 ENSGALG00000013079 12 0.878 - - 0.878 - - - - - - -
36. SH3TC2 2 0.878 - - 0.878 - - - - - - - SH3 domain and tetratricopeptide repeats 2
37. CDH6 ENSGALG00000012917 17 0.878 - - 0.878 - - - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
38. NFATC2 ENSGALG00000007963 15 0.878 - - 0.878 - - - - - - - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
39. ENSGALG00000021824 ENSGALG00000021824 6 0.878 - - 0.878 - - - - - - -
40. NEIL2 ENSGALG00000016664 4 0.878 - - 0.878 - - - - - - - nei like DNA glycosylase 2 [Source:NCBI gene;Acc:422037]
41. LYG2 ENSGALG00000016761 7 0.878 - - 0.878 - - - - - - - lysozyme g2 [Source:NCBI gene;Acc:395708]
42. STAR ENSGALG00000003242 4 0.878 - - 0.878 - - - - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
43. ENSGALG00000002367 ENSGALG00000002367 10 0.878 - - 0.878 - - - - - - -
44. APOB ENSGALG00000016491 34 0.869 - - 0.869 - - - - - - - apolipoprotein B [Source:NCBI gene;Acc:396535]
45. VASN 583 0.861 - - - 0.861 - - - - - - vasorin, transcript variant X1
46. VT4 VT4 9 0.859 - - - 0.859 - - - - - -
47. ZDHHC3 ENSGALG00000029266 11 0.854 - - 0.854 - - - - - - - zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
48. PRPF19 ENSGALG00000040048 168 0.851 - - 0.851 - - - - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
49. FTO ENSGALG00000041036 11 0.848 - - 0.848 - - - - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
50. MUC13 7 0.842 - - - 0.842 - - - - - - mucin 13, cell surface associated, transcript variant X10
51. CLDN20 ENSGALG00000027634 25 0.842 - - 0.842 - - - - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
52. ENSGALG00000021710 ENSGALG00000021710 2 0.838 - - - 0.838 - - - - - -
53. ENSGALG00000012518 ENSGALG00000012518 25 0.838 - - - 0.838 - - - - - -
54. UBAP1L ENSGALG00000007333 39 0.838 - - - 0.838 - - - - - - ubiquitin associated protein 1 like [Source:NCBI gene;Acc:769261]
55. GRP ENSGALG00000040959 167 0.834 - - - 0.834 - - - - - - gastrin releasing peptide [Source:NCBI gene;Acc:425213]
56. MFHAS1 ENSGALG00000011444 7 0.816 - - 0.816 - - - - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
57. TNFRSF19 ENSGALG00000017119 25 0.815 - - 0.815 - - - - - - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
58. IL13RA1 ENSGALG00000044480 24 0.814 - - 0.814 - - - - - - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
59. ZBTB41 ENSGALG00000002305 97 0.812 - - 0.812 - - - - - - - zinc finger and BTB domain containing 41, transcript variant X2
60. ABHD14A 174 0.809 - - - 0.809 - - - - - - abhydrolase domain containing 14A
61. RAB31 ENSGALG00000022874 418 0.807 - - 0.807 - - - - - - - RAB31, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9771]
62. PAFAH2 ENSGALG00000021658 68 0.805 - - 0.805 - - - - - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
63. MSI2 ENSGALG00000005567 31 0.804 - - - 0.804 - - - - - - musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585]
64. ANKH ENSGALG00000012964 273 0.803 - - 0.803 - - - - - - - ANKH inorganic pyrophosphate transport regulator [Source:NCBI gene;Acc:420917]
65. SCTR ENSGALG00000012106 49 0.801 - - 0.801 - - - - - - - secretin receptor [Source:NCBI gene;Acc:770943]
66. HAO1 ENSGALG00000008845 22 0.796 - - - 0.796 - - - - - - hydroxyacid oxidase 1 [Source:NCBI gene;Acc:416728]
67. ENSGALG00000014620 ENSGALG00000014620 7 0.795 - - - 0.795 - - - - - -
68. TMEM248 ENSGALG00000033954 248 0.788 - - 0.788 - - - - - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
69. FASTKD1 ENSGALG00000009841 45 0.787 - - 0.787 - - - - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
70. SYNJ2BP ENSGALG00000009387, ENSGALG00000035537 124 0.785 - - 0.785 - - - - - - - synaptojanin 2 binding protein, transcript variant X2
71. TTLL2 ENSGALG00000011344 14 0.783 - - 0.783 - - - - - - - tubulin tyrosine ligase like 2, transcript variant X1
72. SLC22A16 ENSGALG00000015055 21 0.775 - - 0.775 - - - - - - - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
73. gga-mir-6569 ENSGALG00000026551 10 0.77 - - 0.770 - - - - - - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
74. TECR ENSGALG00000005776 430 0.761 - - 0.761 - - - - - - - trans-2,3-enoyl-CoA reductase, transcript variant X6
75. MIER3 ENSGALG00000014721 57 0.76 - - 0.760 - - - - - - - MIER family member 3, transcript variant X6
76. SLC35B4 ENSGALG00000038187 320 0.755 - - 0.755 - - - - - - - solute carrier family 35 member B4 [Source:HGNC Symbol;Acc:HGNC:20584]
77. IPPK ENSGALG00000004684 39 0.753 - - 0.753 - - - - - - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
78. BNIP3 ENSGALG00000010476 177 0.752 - - - - - - - - - 0.752 BCL2 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1084]
79. PTK2B ENSGALG00000016564 406 0.752 - - 0.752 - - - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
80. CCDC175 17 0.748 - - - - - - - - - 0.748 coiled-coil domain containing 175
81. SGK196 SGK196 83 0.743 - - 0.743 - - - - - - -
82. PLCXD3 ENSGALG00000014845 247 0.742 - - 0.742 - - - - - - - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
83. EXOC5 ENSGALG00000012105 23 0.738 - - 0.738 - - - - - - - exocyst complex component 5 [Source:NCBI gene;Acc:423549]
84. CFAP221 ENSGALG00000012100 74 0.737 - - 0.737 - - - - - - - cilia and flagella associated protein 221 [Source:HGNC Symbol;Acc:HGNC:33720]
85. MMEL1 ENSGALG00000001115 46 0.736 - - 0.736 - - - - - - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
86. ENSGALG00000008594 ENSGALG00000008594 54 0.734 - - - 0.734 - - - - - -
87. HPX ENSGALG00000022586 46 0.734 - - 0.734 - - - - - - - hemopexin [Source:HGNC Symbol;Acc:HGNC:5171]
88. GBP ENSGALG00000026152 38 0.729 - - 0.729 - - - - - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
89. HOMER1 ENSGALG00000014813 19 0.729 - - 0.729 - - - - - - - homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
90. IQCB1 ENSGALG00000011655 378 0.727 - - 0.727 - - - - - - - IQ motif containing B1 [Source:HGNC Symbol;Acc:HGNC:28949]
91. WNT5B ENSGALG00000012998 35 0.725 - - 0.725 - - - - - - - Wnt family member 5B [Source:NCBI gene;Acc:418154]
92. SNAPC4 ENSGALG00000044726 36 0.725 - - 0.725 - - - - - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
93. ARHGEF37 ENSGALG00000039652 28 0.723 - - 0.723 - - - - - - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
94. ENSGALG00000023773 ENSGALG00000023773 77 0.722 - - - 0.722 - - - - - -
95. KDM4C ENSGALG00000020557 145 0.718 - - 0.718 - - - - - - - lysine demethylase 4C [Source:HGNC Symbol;Acc:HGNC:17071]
96. FAM219A ENSGALG00000005821 52 0.717 - - - 0.717 - - - - - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
97. TMC3 ENSGALG00000006376 12 0.714 - - - - - - - - - 0.714 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
98. DDO ENSGALG00000015057 25 0.714 - - - - - - - - - 0.714 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
99. VTG1 ENSGALG00000039354 17 0.714 - - - - - - - - - 0.714 vitellogenin 1 [Source:NCBI gene;Acc:424547]
100. C18H17ORF67 ENSGALG00000024428 10 0.714 - - - - - - - - - 0.714 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA