Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RHO

Gene Name Gene ID Reads Annotation
RHO ENSGALG00000020745 56 rhodopsin [Source:NCBI gene;Acc:751791]











Genes with expression patterns similar to RHO

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RHO ENSGALG00000020745 56 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 rhodopsin [Source:NCBI gene;Acc:751791]
2. CORO7 ENSGALG00000038325 580 0.9 - - - 0.900 - - - - - - coronin 7 [Source:NCBI gene;Acc:416670]
3. ENSGALG00000028742 ENSGALG00000028742 5 0.894 - - - 0.894 - - - - - -
4. LAMC2 5 0.894 - - - 0.894 - - - - - - laminin subunit gamma 2
5. CFTII CFTII 6 0.894 - - - 0.894 - - - - - -
6. ENSGALG00000027667 ENSGALG00000027667 12 0.894 - - - 0.894 - - - - - -
7. LRRC32 9 0.894 - - - 0.894 - - - - - - leucine rich repeat containing 32
8. FOXE3 11 0.894 - - - 0.894 - - - - - - forkhead box E3
9. TAT ENSGALG00000000893 11 0.892 - - - 0.892 - - - - - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
10. ENSGALG00000010272 ENSGALG00000010272 19 0.886 - - - 0.886 - - - - - -
11. HBP1 ENSGALG00000008050 19 0.886 - - - 0.886 - - - - - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
12. GAREM GAREM 16 0.882 - - - 0.882 - - - - - -
13. ZNF366 ENSGALG00000015008 189 0.881 - - - 0.881 - - - - - - zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]
14. MYBPC3 ENSGALG00000008148 315 0.878 - - - 0.878 - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
15. CAMK1G ENSGALG00000001319 58 0.869 - - - 0.869 - - - - - - calcium/calmodulin dependent protein kinase IG [Source:HGNC Symbol;Acc:HGNC:14585]
16. NUP210L 370 0.869 - - - 0.869 - - - - - - nucleoporin 210 like
17. AGRP ENSGALG00000002244 27 0.861 - - - 0.861 - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
18. C9orf91 C9orf91 629 0.86 - - - 0.860 - - - - - -
19. GRB7 ENSGALG00000036500 55 0.852 - - - 0.852 - - - - - - growth factor receptor bound protein 7 [Source:HGNC Symbol;Acc:HGNC:4567]
20. ASTE1 ENSGALG00000036171 155 0.85 - - - 0.850 - - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
21. IQUB ENSGALG00000008823 65 0.85 - - - 0.850 - - - - - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
22. LVRN ENSGALG00000002318 14 0.847 - - - 0.847 - - - - - - laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
23. CRISPLD1 ENSGALG00000033880 64 0.83 - - - 0.830 - - - - - - cysteine rich secretory protein LCCL domain containing 1 [Source:NCBI gene;Acc:395369]
24. ENSGALG00000001004 ENSGALG00000001004 17 0.825 - - - 0.825 - - - - - -
25. FREM2 ENSGALG00000033671 16 0.822 - - - 0.822 - - - - - - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
26. LRRC63 8 0.814 - - - 0.814 - - - - - - leucine rich repeat containing 63, transcript variant X3
27. MOV10 ENSGALG00000001558 244 0.811 - - - - - 0.811 - - - - Mov10 RISC complex RNA helicase [Source:NCBI gene;Acc:419872]
28. SOSTDC1 ENSGALG00000036836 1081 0.811 - - - 0.811 - - - - - - sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
29. MUTYH ENSGALG00000010226 202 0.81 - - - 0.810 - - - - - - mutY DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7527]
30. MAPRE3 ENSGALG00000031726 191 0.807 - - - 0.807 - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
31. CKMT2 ENSGALG00000015602 46 0.804 - - - 0.804 - - - - - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
32. SEMA3A ENSGALG00000006560 170 0.8 - - - - - 0.800 - - - - semaphorin 3A [Source:NCBI gene;Acc:395825]
33. SLA ENSGALG00000039264 34 0.799 - - - 0.799 - - - - - - Src like adaptor [Source:NCBI gene;Acc:378908]
34. MPL ENSGALG00000009965 334 0.799 - - - 0.799 - - - - - - MPL proto-oncogene, thrombopoietin receptor [Source:NCBI gene;Acc:414804]
35. SGPP2 ENSGALG00000005245 20 0.793 - - - 0.793 - - - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
36. BICC1 ENSGALG00000036095 42 0.792 - - - 0.792 - - - - - - BicC family RNA binding protein 1 [Source:NCBI gene;Acc:423604]
37. MYO1C ENSGALG00000002709 57 0.79 - - - 0.790 - - - - - - myosin IC [Source:NCBI gene;Acc:417555]
38. ANKRD2 ENSGALG00000007539 13 0.783 - - - 0.783 - - - - - - ankyrin repeat domain 2 [Source:HGNC Symbol;Acc:HGNC:495]
39. MRAP2 ENSGALG00000015838 7 0.778 - - - - - - - - - 0.778 Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
40. NR0B1 ENSGALG00000016287 481 0.774 - - - 0.774 - - - - - - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
41. RBFOX1 ENSGALG00000034325 2133 0.772 - - - - - - - 0.772 - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
42. TRDN ENSGALG00000014848 130 0.77 - - - 0.770 - - - - - - triadin
43. TNS3 ENSGALG00000039139 63 0.766 - - - 0.766 - - - - - - tensin 3 [Source:NCBI gene;Acc:420792]
44. ELN 765 0.764 - - - 0.764 - - - - - - elastin, transcript variant X24
45. PDE6G ENSGALG00000004514 231 0.761 - - - 0.761 - - - - - - phosphodiesterase 6G [Source:NCBI gene;Acc:395091]
46. CCBL2 CCBL2 184 0.761 - - - 0.761 - - - - - -
47. MICAL1 ENSGALG00000032190 134 0.759 - - - 0.759 - - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:NCBI gene;Acc:429474]
48. FBXO18 35 0.758 - - - 0.758 - - - - - - F-box protein, helicase, 18, transcript variant X4
49. ELMSAN1 ENSGALG00000009282 79 0.758 - - - 0.758 - - - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
50. HOGA1 ENSGALG00000006134 25 0.756 - - - - - - - 0.756 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
51. SUB1L1 ENSGALG00000027147 73 0.752 - - - - - - 0.752 - - - SUB1 homolog (S. cerevisiae)-like 1
52. ABLIM2 ENSGALG00000043448 48 0.752 - - - 0.752 - - - - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
53. CCM2L ENSGALG00000006479 344 0.752 - - - 0.752 - - - - - - CCM2 like scaffold protein [Source:HGNC Symbol;Acc:HGNC:16153]
54. CYB5R4 1222 0.749 - - - 0.749 - - - - - - cytochrome b5 reductase 4, transcript variant X2
55. FAM105B 56 0.748 - - - 0.748 - - - - - - family with sequence similarity 105, member B, transcript variant X18
56. MSL2 ENSGALG00000039294 55 0.745 - - - - - 0.745 - - - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
57. EMILIN3 ENSGALG00000030012 6200 0.745 - - - - - 0.745 - - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
58. TDRP ENSGALG00000016356 36 0.745 - - - 0.745 - - - - - - testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
59. C19orf25 551 0.738 - - - 0.738 - - - - - - chromosome 19 open reading frame 25
60. ZNF750 ENSGALG00000001518 151 0.737 - - - 0.737 - - - - - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
61. DIS3L ENSGALG00000007643 69 0.736 - - - 0.736 - - - - - - DIS3 like exosome 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:28698]
62. XKR8 ENSGALG00000030305 1288 0.736 - - - 0.736 - - - - - - XK related 8 [Source:NCBI gene;Acc:724081]
63. AGK ENSGALG00000012870 326 0.736 - - - 0.736 - - - - - - acylglycerol kinase [Source:HGNC Symbol;Acc:HGNC:21869]
64. BERT BERT 283 0.735 - - - 0.735 - - - - - -
65. RGS4 ENSGALG00000002564 201 0.727 - - - - - 0.727 - - - - regulator of G-protein signaling 4 [Source:NCBI gene;Acc:378901]
66. ENSGALG00000025773 ENSGALG00000025773 977 0.725 - - - 0.725 - - - - - -
67. ZP4 ENSGALG00000005462 1 0.721 - - - - - - - - - 0.721 zona pellucida glycoprotein 4 [Source:NCBI gene;Acc:395692]
68. OTP ENSGALG00000026744 162 0.721 - - - - - - - - - 0.721 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
69. RGP1 ENSGALG00000002394 5937 0.721 - - - 0.721 - - - - - - RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
70. B3GNT7 ENSGALG00000007701 929 0.72 - - - - - 0.720 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
71. ENSGALG00000007388 ENSGALG00000007388 41 0.718 - - - - - - - - - 0.718
72. T ENSGALG00000011489 2619 0.717 - - - - - 0.717 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
73. FAM129B ENSGALG00000023872 84 0.715 - - - 0.715 - - - - - - family with sequence similarity 129 member B [Source:HGNC Symbol;Acc:HGNC:25282]
74. AKAP11 ENSGALG00000022739 82 0.715 - - - 0.715 - - - - - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
75. TAC1 ENSGALG00000009737 2211 0.714 - - - - - 0.714 - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
76. RRAD ENSGALG00000005140 183 0.712 - - - - - 0.712 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
77. OCA2 ENSGALG00000016740 421 0.712 - - - - - 0.712 - - - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
78. ECEL1 ENSGALG00000030420 670 0.711 - - - - - - - 0.711 - - endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
79. SLC2A12 ENSGALG00000013980 1058 0.71 - - - 0.710 - - - - - - solute carrier family 2 member 12 [Source:HGNC Symbol;Acc:HGNC:18067]
80. APOD ENSGALG00000006995 2 0.709 - - - - - 0.709 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
81. SPON2 ENSGALG00000038433 1240 0.709 - - - - - 0.709 - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
82. HOXA10 ENSGALG00000026631 1 0.709 - - - - - 0.709 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
83. KCNG1 ENSGALG00000007980 26 0.709 - - - - - 0.709 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
84. GJC2 ENSGALG00000005331 206 0.708 - - - 0.708 - - - - - - gap junction protein gamma 2 [Source:NCBI gene;Acc:420397]
85. TTPAL ENSGALG00000004244 2734 0.707 - - - 0.707 - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
86. LMTK2 ENSGALG00000003479 46 0.707 - - - 0.707 - - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
87. ADAMTS3 ENSGALG00000011623 77 0.706 - - - - - 0.706 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 3 [Source:HGNC Symbol;Acc:HGNC:219]
88. ACAN ENSGALG00000006725 184 0.704 - - - - - 0.704 - - - - aggrecan [Source:NCBI gene;Acc:395798]
89. TMPRSS7 ENSGALG00000015389 12 0.704 - - - - - 0.704 - - - - transmembrane serine protease 7 [Source:HGNC Symbol;Acc:HGNC:30846]
90. CCL17 ENSGALG00000024466 10 0.704 - - - - - 0.704 - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
91. COL9A1 ENSGALG00000015970 3788 0.704 - - - - - 0.704 - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
92. ESCO2 ENSGALG00000016583 1809 0.703 - - - 0.703 - - - - - - establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:27230]
93. SCARB1 ENSGALG00000046226 428 0.703 - - - - - - - 0.703 - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
94. SCARA5 ENSGALG00000016580 712 0.702 - - - - - 0.702 - - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
95. FOXI2 57 0.701 - - - 0.701 - - - - - - forkhead box I2, transcript variant X6
96. RILP ENSGALG00000002843 1018 0.701 - - - 0.701 - - - - - - Rab interacting lysosomal protein [Source:HGNC Symbol;Acc:HGNC:30266]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA