Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RHBDL3

Gene Name Gene ID Reads Annotation
RHBDL3 ENSGALG00000003426 19 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]











Genes with expression patterns similar to RHBDL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RHBDL3 ENSGALG00000003426 19 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
2. ENSGALG00000006495 ENSGALG00000006495 4 1.623 - - - - 0.794 0.829 - - - -
3. ENSGALG00000026584 ENSGALG00000026584 77 0.958 - - - - - 0.958 - - - -
4. GDF10 ENSGALG00000005985 11 0.954 - - - - - 0.954 - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
5. TSKU ENSGALG00000000761 10 0.914 - - - - - 0.914 - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
6. PAPPA ENSGALG00000007079 6 0.91 - - - - - - - - - 0.910 pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
7. HGSNAT ENSGALG00000010136 18 0.897 - - - - - - - - - 0.897 heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:26527]
8. PODN ENSGALG00000021869 71 0.889 - - - - - - - - - 0.889 podocan [Source:HGNC Symbol;Acc:HGNC:23174]
9. CAMK2A ENSGALG00000005621 3 0.883 - - - - - - - - - 0.883 calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
10. GBX-1 GBX-1 1430 0.877 - - - - - 0.877 - - - -
11. CLEC18B ENSGALG00000027183 284 0.872 - - - - - 0.872 - - - - C-type lectin domain family 18 member B, transcript variant X2
12. VSTM4 ENSGALG00000006174 98 0.871 - - - - - 0.871 - - - - V-set and transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26470]
13. FSIP1 ENSGALG00000009624 40 0.869 - - - - - 0.869 - - - - fibrous sheath interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:21674]
14. KLF13 ENSGALG00000026590 13 0.868 - - - - - - - - - 0.868 Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
15. ABHD3 ENSGALG00000014938 9 0.865 - - - - - - - - - 0.865 abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
16. RAB3C ENSGALG00000014726 10 0.864 - - - - - - - - - 0.864 RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
17. ENSGALG00000004619 ENSGALG00000004619 3 0.859 - - - - - - - - - 0.859
18. TRIM36 ENSGALG00000008188 1 0.859 - - - - - - - - - 0.859 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
19. ESR2 ENSGALG00000011801 7 0.859 - - - - - - - - - 0.859 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
20. ENSGALG00000009487 ENSGALG00000009487 1 0.859 - - - - - - - - - 0.859
21. C6orf58 ENSGALG00000045522 2 0.859 - - - - - - - - - 0.859 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
22. FOSL2 ENSGALG00000010036 3 0.859 - - - - - - - - - 0.859 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
23. ENSGALG00000024286 ENSGALG00000024286 2 0.859 - - - - - - - - - 0.859
24. CAMTA1 ENSGALG00000039525 1 0.859 - - - - - - - - - 0.859 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
25. EXOC6B ENSGALG00000016098 3 0.859 - - - - - - - - - 0.859 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
26. TTC29 ENSGALG00000010009 4 0.859 - - - - - - - - - 0.859 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
27. ACOT1L ENSGALG00000008752 6 0.859 - - - - - - - - - 0.859 acyl-CoA thioesterase 1-like
28. C8B ENSGALG00000010853 21 0.859 - - - - - - - - - 0.859 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
29. RUFY4 2 0.859 - - - - - - - - - 0.859 RUN and FYVE domain containing 4, transcript variant X5
30. RS1 ENSGALG00000016523 11 0.859 - - - - - - - - - 0.859 retinoschisin 1 [Source:NCBI gene;Acc:772315]
31. gga-mir-22 ENSGALG00000024507 2 0.859 - - - - - - - - - 0.859 gga-mir-22 [Source:miRBase;Acc:MI0006982]
32. SNX13 ENSGALG00000010840 13 0.859 - - - - - - - - - 0.859 sorting nexin 13 [Source:NCBI gene;Acc:420598]
33. IFN-GAMMA IFN-GAMMA 1 0.859 - - - - - - - - - 0.859
34. POLR3G ENSGALG00000014650 7 0.859 - - - - - - - - - 0.859 RNA polymerase III subunit G, transcript variant X2
35. ENSGALG00000026496 ENSGALG00000026496 9 0.859 - - - - - - - - - 0.859
36. GRAMD2 GRAMD2 3 0.859 - - - - - - - - - 0.859
37. MST MST 9 0.859 - - - - - - - - - 0.859
38. WNT7A ENSGALG00000005123 2 0.859 - - - - - - - - - 0.859 Wnt family member 7A [Source:NCBI gene;Acc:374168]
39. NUDT3 ENSGALG00000002830 7 0.859 - - - - - - - - - 0.859 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
40. SNORA77 SNORA77 5 0.859 - - - - - - - - - 0.859
41. RBL2 ENSGALG00000003663 10 0.859 - - - - - - - - - 0.859 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
42. NT5E ENSGALG00000015833 5 0.859 - - - - - - - - - 0.859 5'-nucleotidase ecto
43. RAB9B ENSGALG00000004918 2 0.859 - - - - - - - - - 0.859 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
44. DAPK1 ENSGALG00000012608 17 0.859 - - - - - - - - - 0.859 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
45. LRRN3 ENSGALG00000009488 1 0.859 - - - - - - - - - 0.859 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
46. C4orf47 ENSGALG00000013287 44 0.858 - - - - - - - - - 0.858 chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
47. SLC7A11 ENSGALG00000009758 104 0.847 - - - - - 0.847 - - - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
48. CDH6 ENSGALG00000012917 17 0.845 - - - - - - - - - 0.845 cadherin 6 [Source:NCBI gene;Acc:414842]
49. RASL11AL ENSGALG00000007710 88 0.844 - - - - - 0.844 - - - - ras-like protein family member 11A-like
50. CRHBP ENSGALG00000014994 8 0.833 - - 0.833 - - - - - - - corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
51. SNORA40 SNORA40 12 0.831 - - - - - - - - - 0.831
52. ACPP ENSGALG00000043415 4 0.829 - - - - - 0.829 - - - - acid phosphatase, prostate, transcript variant X2
53. ENSGALG00000024369 ENSGALG00000024369 4 0.829 - - - - - 0.829 - - - -
54. SMIM10 SMIM10 2 0.829 - - - - - 0.829 - - - -
55. TMEM181 ENSGALG00000013737 19 0.829 - - - - - 0.829 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
56. VWA3B ENSGALG00000040709 5 0.829 - - - - - 0.829 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
57. WNT3 ENSGALG00000001079 8 0.829 - - - - - 0.829 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
58. INHBB ENSGALG00000028770 2 0.829 - - - - - 0.829 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
59. CLDN19 ENSGALG00000023580 1 0.829 - - - - - 0.829 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
60. SHANK2 ENSGALG00000035916 9 0.829 - - - - - 0.829 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
61. SRPX2 ENSGALG00000006796 32 0.829 - - - - - 0.829 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
62. TRAF1 ENSGALG00000001583 3 0.829 - - - - - 0.829 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
63. CREB3 ENSGALG00000002523 23 0.829 - - - - - 0.829 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
64. VTG1 ENSGALG00000039354 17 0.829 - - - - - 0.829 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
65. ENSGALG00000025912 ENSGALG00000025912 4 0.829 - - - - - 0.829 - - - -
66. ITGAV ENSGALG00000002655 26 0.829 - - - - - 0.829 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
67. SLC38A7 ENSGALG00000002313 25 0.829 - - - - - 0.829 - - - - solute carrier family 38 member 7, transcript variant X5
68. BAP1 ENSGALG00000004366 12 0.829 - - - - - 0.829 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
69. RAB4A ENSGALG00000036218 20 0.829 - - - - - 0.829 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
70. ANKFN1 ENSGALG00000003105 15 0.829 - - - - - 0.829 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
71. DPF3 ENSGALG00000009352 7 0.829 - - - - - 0.829 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
72. ENSGALG00000020320 ENSGALG00000020320 1 0.829 - - - - - 0.829 - - - -
73. KCNQ3 ENSGALG00000037626 6 0.829 - - - - - 0.829 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
74. OLIG3 ENSGALG00000013862 51 0.829 - - - - - 0.829 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
75. BCMO1 BCMO1 35 0.829 - - - - - 0.829 - - - -
76. ABI3BP ENSGALG00000015307 4 0.829 - - - - - 0.829 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
77. TMEM201 ENSGALG00000002527 2 0.829 - - - - - 0.829 - - - - transmembrane protein 201
78. PEX26 ENSGALG00000019286 1 0.829 - - - - - 0.829 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
79. LMLN ENSGALG00000012067 15 0.822 - - - - - - - - - 0.822 leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
80. Sep-03 Sep-03 109 0.821 - - - - - 0.821 - - - -
81. EPHA1 ENSGALG00000014687 174 0.811 - - - - - - - - - 0.811 EPH receptor A1 [Source:NCBI gene;Acc:378782]
82. SMYD3 ENSGALG00000010653 14 0.811 - - - - - - - - - 0.811 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
83. SCG5 ENSGALG00000009725 10 0.809 - - - - - 0.809 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
84. PIWIL1 ENSGALG00000002645 23 0.807 - - - 0.807 - - - - - - piwi like RNA-mediated gene silencing 1 [Source:NCBI gene;Acc:416804]
85. MAPK10 ENSGALG00000011109 16 0.807 - - - - - 0.807 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
86. P2RY13 ENSGALG00000039432 16 0.803 - - - - - - - - - 0.803 purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
87. STYK1 ENSGALG00000014759 3 0.801 - - - - - 0.801 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
88. SNORA74 SNORA74 8 0.801 - - - - - 0.801 - - - -
89. FHAD1 ENSGALG00000034761 3 0.8 - - - - - 0.800 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
90. PCDH8 ENSGALG00000036258 1945 0.799 - - - - - 0.799 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
91. UNCX ENSGALG00000039292 165 0.797 - - - - - 0.797 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
92. CMTM4 ENSGALG00000005251 5 0.794 - - - - 0.794 - - - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
93. RNF157 ENSGALG00000002008 1 0.794 - - - - 0.794 - - - - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
94. RD3 ENSGALG00000009861 2 0.794 - - - - 0.794 - - - - - retinal degeneration 3, GUCY2D regulator [Source:HGNC Symbol;Acc:HGNC:19689]
95. ABCC3 ENSGALG00000007522 340 0.794 - - - - 0.794 - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
96. SALL3 ENSGALG00000041404 29 0.794 - - - - 0.794 - - - - - spalt like transcription factor 3 [Source:NCBI gene;Acc:395359]
97. ZFYVE26 ENSGALG00000028762 18 0.794 - - - - 0.794 - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
98. SASH1 ENSGALG00000012342 28 0.794 - - - - 0.794 - - - - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
99. JDP2 ENSGALG00000010322 11 0.794 - - - - 0.794 - - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
100. SNX8 ENSGALG00000004255 4 0.794 - - - - 0.794 - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]

There are 64 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA