Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RHBDF1

Gene Name Gene ID Reads Annotation
RHBDF1 ENSGALG00000007434 2359 rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]











Genes with expression patterns similar to RHBDF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RHBDF1 ENSGALG00000007434 2359 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
2. TMEM167A ENSGALG00000027332 13862 1.723 - - - - 0.987 - 0.736 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
3. SRP68 ENSGALG00000002062 7370 1.719 - - - - 0.989 - 0.730 - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
4. TDRD3 ENSGALG00000016936 3412 1.709 - - - - 0.993 - 0.716 - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
5. OCIAD1 ENSGALG00000014081 12065 1.684 - - - - 0.974 - 0.710 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
6. CSRP1 ENSGALG00000000318 3702 1.47 - - - - - - 0.750 0.720 - - cysteine and glycine rich protein 1 [Source:NCBI gene;Acc:396176]
7. PSMB7 ENSGALG00000001103 42683 1.459 - - - - 0.724 - 0.735 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
8. ATG10 ENSGALG00000027714 1100 1.455 - - - - - - 0.703 - 0.752 - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
9. MAP3K13 ENSGALG00000006655 632 0.998 - - - - 0.998 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
10. PCIF1 ENSGALG00000023547 867 0.998 - - - - 0.998 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
11. MXD4 ENSGALG00000015688 1472 0.997 - - - - 0.997 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
12. KAT6A ENSGALG00000003641 2631 0.997 - - - - 0.997 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
13. TMEM65 ENSGALG00000037371 776 0.997 - - - - 0.997 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
14. AEN ENSGALG00000044204 2633 0.996 - - - - 0.996 - - - - - apoptosis enhancing nuclease, transcript variant X1
15. ENSGALG00000005720 ENSGALG00000005720 1666 0.996 - - - - 0.996 - - - - -
16. C9orf89 C9orf89 3056 0.996 - - - - 0.996 - - - - -
17. CSNK1E ENSGALG00000032257 2165 0.996 - - - - 0.996 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
18. LSMD1 LSMD1 2562 0.995 - - - - 0.995 - - - - -
19. NOL12 ENSGALG00000012410 5658 0.995 - - - - 0.995 - - - - - nucleolar protein 12
20. FOCAD ENSGALG00000015071 3677 0.995 - - - - 0.995 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
21. PIK3CD ENSGALG00000002583 1036 0.995 - - - - 0.995 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
22. CDR2L ENSGALG00000026295 4142 0.995 - - - - 0.995 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
23. TIMM21 ENSGALG00000013709 3215 0.994 - - - - 0.994 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
24. DARS ENSGALG00000012355 2887 0.994 - - - - 0.994 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
25. CLSPN ENSGALG00000002346 2590 0.994 - - - - 0.994 - - - - - claspin [Source:NCBI gene;Acc:428223]
26. RBM15B 5416 0.994 - - - - 0.994 - - - - - RNA binding motif protein 15B
27. PDXP ENSGALG00000023131 2663 0.994 - - - - 0.994 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
28. MAP1LC3A ENSGALG00000038721 2230 0.994 - - - - 0.994 - - - - - microtubule associated protein 1 light chain 3 alpha
29. MTG1 ENSGALG00000003549 5032 0.994 - - - - 0.994 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
30. FBXW7 ENSGALG00000010103 5982 0.993 - - - - 0.993 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
31. ITPK1 ENSGALG00000034898 4212 0.992 - - - - 0.992 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
32. NMT1 ENSGALG00000000857 5770 0.992 - - - - 0.992 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
33. CRIPT ENSGALG00000010014 4311 0.992 - - - - 0.992 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
34. COPG2 ENSGALG00000008144 4542 0.992 - - - - 0.992 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
35. HABP4 ENSGALG00000012628 2894 0.991 - - - - 0.991 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
36. PAXIP1 ENSGALG00000036064 3120 0.99 - - - - 0.990 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
37. ADSL ENSGALG00000012034 10280 0.989 - - - - 0.989 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
38. GLB1L2 ENSGALG00000001604 4057 0.989 - - - - 0.989 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
39. FAM18B1 ENSGALG00000001335 5177 0.988 - - - - 0.988 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
40. GPALPP1 ENSGALG00000031567 4221 0.988 - - - - 0.988 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
41. BTBD7 4136 0.987 - - - - 0.987 - - - - - BTB domain containing 7, transcript variant X2
42. CNOT2 ENSGALG00000010042 7612 0.987 - - - - 0.987 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
43. BRCC3 ENSGALG00000005383 4844 0.987 - - - - 0.987 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
44. AIP ENSGALG00000040247 4166 0.986 - - - - 0.986 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
45. LFNG ENSGALG00000038515 5178 0.986 - - - - 0.986 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
46. SOD2 ENSGALG00000011661 13178 0.985 - - - - 0.985 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
47. KDM1A ENSGALG00000033469 20632 0.985 - - - - 0.985 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
48. MANF ENSGALG00000002362 7518 0.985 - - - - 0.985 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
49. WSB2 ENSGALG00000008151 13246 0.984 - - - - 0.984 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
50. MRPL32 ENSGALG00000037258 6861 0.983 - - - - 0.983 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
51. MPPED1 ENSGALG00000014186 5726 0.983 - - - - 0.983 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
52. ANXA11 ENSGALG00000043826 5189 0.982 - - - - 0.982 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
53. TXNDC9 ENSGALG00000032090 6804 0.981 - - - - 0.981 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
54. B4GAL-T7 B4GAL-T7 12356 0.98 - - - - 0.980 - - - - -
55. DRG1 ENSGALG00000006921 10791 0.98 - - - - 0.980 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
56. TIA1 ENSGALG00000013879 16330 0.98 - - - - 0.980 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
57. SH3GLB1 ENSGALG00000006284 12764 0.979 - - - - 0.979 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
58. MAP2K4 ENSGALG00000032178 5982 0.978 - - - - 0.978 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
59. ZNF326 ENSGALG00000006113 15141 0.978 - - - - 0.978 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
60. SUGT1 ENSGALG00000016946 22881 0.977 - - - - 0.977 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
61. gga-mir-1778 ENSGALG00000025181 8765 0.977 - - - - 0.977 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
62. SFRP2 ENSGALG00000009241 4716 0.976 - - - - 0.976 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
63. EIF4G3 ENSGALG00000010084 5881 0.975 - - - - 0.975 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
64. TLK1 ENSGALG00000009569 5446 0.975 - - - - 0.975 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
65. COPA ENSGALG00000009153 11618 0.975 - - - - 0.975 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
66. ASPM ENSGALG00000032398 12784 0.972 - - - - 0.972 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
67. TPP2 ENSGALG00000016865 7509 0.972 - - - - 0.972 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
68. TRAM1 ENSGALG00000041112 22876 0.969 - - - - 0.969 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
69. RSU1 ENSGALG00000040891 12561 0.968 - - - - 0.968 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
70. CKAP5 ENSGALG00000008325 8494 0.967 - - - - 0.967 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
71. SMS ENSGALG00000016379 11607 0.967 - - - - 0.967 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
72. DIABLO ENSGALG00000004412 9499 0.966 - - - - 0.966 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
73. CCDC101 CCDC101 9111 0.966 - - - - 0.966 - - - - -
74. WDR36 ENSGALG00000000247 11277 0.965 - - - - 0.965 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
75. UTP15 ENSGALG00000013510 13122 0.965 - - - - 0.965 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
76. TSPAN5 ENSGALG00000012227 8703 0.964 - - - - 0.964 - - - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
77. DECR1 ENSGALG00000036990 6360 0.964 - - - - 0.964 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
78. MOCS2 ENSGALG00000014906 4974 0.963 - - - - 0.963 - - - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
79. COPB2 ENSGALG00000005357 15208 0.963 - - - - 0.963 - - - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
80. NDUFB4 ENSGALG00000027688 8951 0.962 - - - - 0.962 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
81. MTA1 ENSGALG00000002803 11572 0.959 - - - - 0.959 - - - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
82. LAP3 ENSGALG00000006334 21076 0.959 - - - - 0.959 - - - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
83. FOXK2 ENSGALG00000001577 6346 0.958 - - - - 0.958 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
84. CCNYL1 ENSGALG00000008485 11958 0.958 - - - - 0.958 - - - - - cyclin Y like 1
85. DYNC1LI1 ENSGALG00000011491 11011 0.958 - - - - 0.958 - - - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
86. BAMBI ENSGALG00000040993 7562 0.956 - - - - 0.956 - - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
87. RNF11 ENSGALG00000010539 8617 0.954 - - - - 0.954 - - - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
88. SRSF6 ENSGALG00000000990 12424 0.95 - - - - 0.950 - - - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
89. LASP-2 LASP-2 4415 0.949 - - - - 0.949 - - - - -
90. ZC3H15 ENSGALG00000041857 19808 0.942 - - - - 0.942 - - - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
91. COL4A5 ENSGALG00000008141 15874 0.939 - - - - 0.939 - - - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
92. RBM5 30998 0.938 - - - - 0.938 - - - - - RNA binding motif protein 5, transcript variant X1
93. LSM6 ENSGALG00000009985 18582 0.936 - - - - 0.936 - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
94. LEPREL4 LEPREL4 5609 0.933 - - - - 0.933 - - - - -
95. EIF3J ENSGALG00000008187 43570 0.929 - - - - 0.929 - - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
96. HNRNPLL ENSGALG00000008504 14719 0.929 - - - - 0.929 - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
97. TMED2 ENSGALG00000003307 20704 0.928 - - - - 0.928 - - - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
98. HSP90AA1 ENSGALG00000033212 55740 0.924 - - - - 0.924 - - - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
99. BCCIP ENSGALG00000006617 13291 0.923 - - - - 0.923 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
100. ZNF217 ZNF217 14511 0.923 - - - - 0.923 - - - - -

There are 310 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA