Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RGR

Gene Name Gene ID Reads Annotation
RGR ENSGALG00000002299 17 retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]











Genes with expression patterns similar to RGR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RGR ENSGALG00000002299 17 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
2. ENSGALG00000000346 ENSGALG00000000346 130 1.925 - - - - - 0.925 1.000 - - -
3. TTC7B ENSGALG00000010680 4 1.834 - - - 0.834 - - - 1.000 - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
4. GPCPD1 ENSGALG00000009130 24 1.825 - - - - 0.988 0.837 - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
5. SRD5A2 ENSGALG00000010625 23 1.75 - - - - - - 1.000 0.750 - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
6. PIK3CG ENSGALG00000008081 5 1.701 - - - - - - 1.000 0.701 - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
7. SLC41A2 ENSGALG00000012697 13 1.584 - - - - 0.854 0.730 - - - - solute carrier family 41 member 2 [Source:NCBI gene;Acc:427913]
8. FAM96A ENSGALG00000026448 41 1.448 - - - - - 0.747 - 0.701 - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]
9. PDK4 ENSGALG00000009700 69 1.421 - - - - - - 0.717 - - 0.704 pyruvate dehydrogenase kinase 4 [Source:NCBI gene;Acc:420570]
10. TAT ENSGALG00000000893 11 1 - - - - - - 1.000 - - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
11. ENSGALG00000024306 ENSGALG00000024306 0 1 - - - - - - - 1.000 - -
12. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - - 1.000 - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
13. BRPF3 8 1 - - - - - - 1.000 - - - bromodomain and PHD finger containing, 3, transcript variant X2
14. ABLIM2 ENSGALG00000043448 48 1 - - - - - 1.000 - - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
15. ENSGALG00000001478 ENSGALG00000001478 23 1 - - - - - - 1.000 - - -
16. SH3BP5 ENSGALG00000039337 17 1 - - - - - - - 1.000 - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
17. SESN3 ENSGALG00000017204 7 1 - - - - - - - 1.000 - - sestrin 3, transcript variant X2
18. CACNG3 ENSGALG00000038087 12 1 - - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
19. TMCC1 ENSGALG00000008487 65 1 - - - - - - 1.000 - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
20. LNX1 ENSGALG00000013940 2 1 - - - - - - - 1.000 - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
21. CIB3 ENSGALG00000003978 2 1 - - - - - - - 1.000 - - calcium and integrin binding family member 3 [Source:HGNC Symbol;Acc:HGNC:24580]
22. CETP ENSGALG00000001234 18 1 - - - - - 1.000 - - - - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
23. ARHGEF26 ENSGALG00000010352 3 1 - - - - - 1.000 - - - - Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
24. CTNNAL1 ENSGALG00000013207 44 1 - - - - - - 1.000 - - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
25. PACSIN1 ENSGALG00000002802 6 1 - - - - - - 1.000 - - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
26. CUBN ENSGALG00000008704 21 1 - - - - - - 1.000 - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
27. PRLL ENSGALG00000009603 30 1 - - - - - - - 1.000 - - prolactin-like protein [Source:NCBI gene;Acc:417800]
28. SNX18 ENSGALG00000014914 7 1 - - - - - - - 1.000 - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
29. ENSGALG00000007003 ENSGALG00000007003 2 1 - - - - - - - 1.000 - -
30. CCDC148 ENSGALG00000012555 22 1 - - - - - - 1.000 - - - coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
31. MSL2 ENSGALG00000039294 55 1 - - - - - - 1.000 - - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
32. VEPH1 ENSGALG00000009682 51 1 - - - - - - 1.000 - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
33. SELP 28 1 - - - - - - 1.000 - - - selectin P, transcript variant X9
34. ENSGALG00000012324 ENSGALG00000012324 4 1 - - - - - 1.000 - - - -
35. SMTNL1 12 1 - - - - - - 1.000 - - - smoothelin like 1
36. ENSGALG00000001483 ENSGALG00000001483 215 1 - - - - - - - 1.000 - -
37. ENSGALG00000025872 ENSGALG00000025872 5 1 - - - - - 1.000 - - - -
38. ENSGALG00000026668 ENSGALG00000026668 34 1 - - - - - - - 1.000 - -
39. ENSGALG00000019221 ENSGALG00000019221 9 1 - - - - - - 1.000 - - -
40. TNN ENSGALG00000004538 21 1 - - - - - - - 1.000 - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
41. FBXO43 ENSGALG00000038940 7 1 - - - - - - - 1.000 - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
42. GBF1 ENSGALG00000005637 32 1 - - - - - 1.000 - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
43. MATN3 ENSGALG00000016478 10 1 - - - - - - 1.000 - - - matrilin 3 [Source:NCBI gene;Acc:395954]
44. MCMBP ENSGALG00000009455 90 1 - - - - - - 1.000 - - - minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
45. PLCL1 ENSGALG00000008113 23 1 - - - - - - 1.000 - - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
46. ABHD3 ENSGALG00000014938 9 1 - - - - - 1.000 - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
47. SREBP-1 SREBP-1 2 1 - - - - - 1.000 - - - -
48. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - 1.000 - - -
49. SPEF2 ENSGALG00000023552 23 1 - - - - - 1.000 - - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
50. NME8 ENSGALG00000029677 2 1 - - - - - 1.000 - - - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
51. FAM240B ENSGALG00000021163 6 1 - - - - - - 1.000 - - - family with sequence similarity 240 member B [Source:NCBI gene;Acc:427470]
52. CFAP74 ENSGALG00000001288 54 1 - - - - - - 1.000 - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
53. SYPL1 ENSGALG00000029006 126 1 - - - - - - 1.000 - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
54. gga-mir-6558 ENSGALG00000032123 13 1 - - - - - - 1.000 - - - gga-mir-6558 [Source:miRBase;Acc:MI0022376]
55. CEP85 ENSGALG00000042624 59 1 - - - - - - 1.000 - - - centrosomal protein 85 [Source:HGNC Symbol;Acc:HGNC:25309]
56. ENSGALG00000025761 ENSGALG00000025761 6 1 - - - - 1.000 - - - - -
57. TOPAZ1 18 1 - - - - - 1.000 - - - - testis and ovary specific PAZ domain containing 1, transcript variant X6
58. ENSGALG00000026735 ENSGALG00000026735 5 1 - - - 1.000 - - - - - -
59. ENSGALG00000028038 ENSGALG00000028038 9 1 - - - - - - 1.000 - - -
60. CLDN1 ENSGALG00000026862 28 1 - - - - - - 1.000 - - - claudin 1 [Source:NCBI gene;Acc:424910]
61. ENSGALG00000005511 ENSGALG00000005511 7 1 - - - - - 1.000 - - - -
62. AMY1A ENSGALG00000005147 3 1 - - - - - 1.000 - - - - amylase, alpha 1A; hepatic [Source:NCBI gene;Acc:414139]
63. BOK ENSGALG00000005772 117 1 - - - - - 1.000 - - - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
64. CD72 ENSGALG00000005194 1 1 - - - - - - 1.000 - - - CD72 molecule [Source:NCBI gene;Acc:395923]
65. SLN ENSGALG00000017168 3 1 - - - - - 1.000 - - - - sarcolipin [Source:NCBI gene;Acc:100857277]
66. SNORA75 SNORA75 41 1 - - - - - 1.000 - - - -
67. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - 1.000 - -
68. ALPI ENSGALG00000023866 19 1 - - - - - - - 1.000 - - alkaline phosphatase, intestinal, transcript variant X2
69. LRRC34 ENSGALG00000009402 3 1 - - - - - - - 1.000 - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
70. MPPED2 ENSGALG00000012136 7 1 - - - - - - 1.000 - - - metallophosphoesterase domain containing 2 [Source:NCBI gene;Acc:421604]
71. ENSGALG00000020616 ENSGALG00000020616 3 1 - - - - - - - 1.000 - -
72. DMP1 ENSGALG00000010927 5 1 - - - - - - 1.000 - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
73. B3GALT2 ENSGALG00000002477 13 1 - - - - - 1.000 - - - - beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
74. VSNL1 ENSGALG00000016464 19 1 - - - - - - 1.000 - - - visinin like 1 [Source:NCBI gene;Acc:396189]
75. ZNF362 ENSGALG00000026558 11 1 - - - - - 1.000 - - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
76. CLDN20 ENSGALG00000027634 25 1 - - - - - 1.000 - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
77. ZNF814 ZNF814 13 1 - - - - - - - 1.000 - -
78. ENSGALG00000023475 ENSGALG00000023475 19 1 - - - - - - - 1.000 - -
79. SBSPONL ENSGALG00000005862 129 1 - - - - - - 1.000 - - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
80. ZDHHC18 ENSGALG00000034910 16 1 - - - - - - 1.000 - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
81. C21orf62 ENSGALG00000040059 5 1 - - - - - - 1.000 - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
82. CMC4 ENSGALG00000023937 15 1 - - - - - - - 1.000 - - C-X9-C motif containing 4 [Source:HGNC Symbol;Acc:HGNC:35428]
83. PCID2 ENSGALG00000016831 57 1 - - - - - - 1.000 - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
84. BCL2L14 ENSGALG00000011544 11 1 - - - - - 1.000 - - - - BCL2 like 14 [Source:HGNC Symbol;Acc:HGNC:16657]
85. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 1 - - - - - - 1.000 - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
86. CTNND1 ENSGALG00000007330 53 1 - - - - - - 1.000 - - - catenin delta 1 [Source:HGNC Symbol;Acc:HGNC:2515]
87. LRIT2 ENSGALG00000002307 2 1 - - - - - 1.000 - - - - leucine rich repeat, Ig-like and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:23443]
88. CD320 ENSGALG00000021688 3 1 - - - - - 1.000 - - - - CD320 molecule [Source:NCBI gene;Acc:420066]
89. TGIF2 ENSGALG00000024081 21 1 - - - - - - 1.000 - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
90. DUS4L ENSGALG00000023661 29 1 - - - - - 1.000 - - - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
91. STEAP4 ENSGALG00000008997 8 1 - - - - - - - 1.000 - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
92. ADSSL1 ENSGALG00000011618 85 1 - - - - - - - 1.000 - - adenylosuccinate synthase like 1 [Source:HGNC Symbol;Acc:HGNC:20093]
93. MCMDC2 ENSGALG00000031863 3 1 - - - - - 1.000 - - - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
94. ATHL1 ATHL1 16 1 - - - - - - - 1.000 - -
95. PLA2G1BL ENSGALG00000007236 4 1 - - - - - 1.000 - - - - phospholipase A2, major isoenzyme-like
96. ENSGALG00000019156 ENSGALG00000019156 1 1 - - - - - - 1.000 - - -
97. CYP17A1 ENSGALG00000008121 227 1 - - - - - - 1.000 - - - cytochrome P450 family 17 subfamily A member 1 [Source:NCBI gene;Acc:425056]
98. TM6SF2 ENSGALG00000029015 109 1 - - - - - - 1.000 - - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
99. VSX2 ENSGALG00000033517 30 1 - - - - - - 1.000 - - - visual system homeobox 2 [Source:NCBI gene;Acc:395536]
100. BNIP2 ENSGALG00000003788 38 0.986 - - - - - - - 0.986 - - BCL2 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:1083]

There are 216 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA