Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RGP1

Gene Name Gene ID Reads Annotation
RGP1 ENSGALG00000002394 5937 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]











Genes with expression patterns similar to RGP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RGP1 ENSGALG00000002394 5937 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
2. ATP2B2 ENSGALG00000030908 584 1.803 - - 0.812 - - - - - - 0.991 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
3. S100A11 ENSGALG00000036711 23454 1.747 - - - - - - 0.871 - - 0.876 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
4. DLX5 ENSGALG00000009129 1395 1.724 - - 0.786 - - - - - - 0.938 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
5. ZNF276 ENSGALG00000000513 2410 1.721 - - 0.842 - - - - - - 0.879 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
6. PDCD4 ENSGALG00000008700 574 1.718 - - 0.754 - - - - - - 0.964 programmed cell death 4 [Source:NCBI gene;Acc:374191]
7. CCBL2 CCBL2 184 1.714 - - - 0.736 - - - - - 0.978
8. STAM ENSGALG00000035287 7649 1.709 - - - - - - 0.894 - - 0.815 signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
9. MAN1A1 ENSGALG00000014878 1061 1.7 - - 0.809 - - - - - - 0.891 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
10. PHF2 ENSGALG00000039208 2003 1.697 - - 0.796 - - - - - - 0.901 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
11. RASSF8 ENSGALG00000014041 850 1.686 - - 0.721 - - - - - - 0.965 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
12. ACOX1 ENSGALG00000002159 2953 1.682 - - - - - - - 0.760 - 0.922 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
13. AIFM1 ENSGALG00000004003 10451 1.658 - - - - - - 0.897 - - 0.761 apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
14. SOSTDC1 ENSGALG00000036836 1081 1.657 - - - 0.705 - - - - - 0.952 sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
15. MORN4 ENSGALG00000006149 7772 1.651 - - 0.767 - - - - - - 0.884 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
16. CHURC1 ENSGALG00000042309 12066 1.631 - - - - - - - 0.736 - 0.895 churchill domain containing 1 [Source:NCBI gene;Acc:395448]
17. CSTF3 ENSGALG00000011685 4711 1.618 - - - - - - - 0.794 - 0.824 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
18. EIF3H ENSGALG00000040522 39919 1.608 - - 0.730 - - - 0.878 - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
19. MYO9B ENSGALG00000003717 746 1.607 - - 0.786 - - - - - - 0.821 myosin IXB [Source:NCBI gene;Acc:420135]
20. FBXL17 ENSGALG00000000276 2443 1.598 - - 0.743 - - - - - - 0.855 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
21. RPL30 ENSGALG00000029897 58241 1.595 - - 0.763 - - - 0.832 - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
22. CCT7 ENSGALG00000016088 2824 1.55 - - 0.790 - - - - - - 0.760 chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
23. ATPAF1 ENSGALG00000010444 3677 1.549 - - 0.730 - - - - - - 0.819 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
24. FURIN ENSGALG00000008341 2609 1.547 - - 0.759 - - - - - - 0.788 furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
25. DNPEP ENSGALG00000011318 10623 1.54 - - - - - - - 0.720 - 0.820 aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
26. ENSGALG00000028359 ENSGALG00000028359 479 1.533 - - 0.777 - - - - - - 0.756
27. CCNB3 ENSGALG00000025810 2115 1.517 - - 0.765 - - - - - - 0.752 cyclin B3 [Source:NCBI gene;Acc:396167]
28. MAST4 ENSGALG00000014784 4153 1.515 - - 0.786 - - - - - - 0.729 microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
29. YPEL5 ENSGALG00000009047 3308 1.513 - - 0.752 - - - - - - 0.761 yippee like 5 [Source:NCBI gene;Acc:421299]
30. CROT ENSGALG00000008813 8052 1.51 - - 0.788 - - - - 0.722 - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
31. ARL13B ENSGALG00000015412 2968 1.505 - - 0.762 - - - - 0.743 - - ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
32. XPC ENSGALG00000006357 2484 1.494 - - 0.755 - - - - - - 0.739 XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
33. ACTL6A ENSGALG00000009061 13013 1.477 - - 0.760 - - - - - - 0.717 actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
34. METTL6 ENSGALG00000040665 4467 1.45 - - 0.707 - - - - - - 0.743 methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
35. EBAG9 ENSGALG00000036293 10058 1.419 - - - - - - - 0.703 - 0.716 estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
36. ADAMTS12 55 0.994 - - - - - - - - - 0.994 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
37. MAP3K8 ENSGALG00000007356 188 0.993 - - - - - - - - - 0.993 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
38. TM6SF2 ENSGALG00000029015 109 0.993 - - - - - - - - - 0.993 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
39. SOS2 ENSGALG00000012273 41 0.993 - - - - - - - - - 0.993 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
40. CNKSR3 ENSGALG00000027159 41 0.993 - - - - - - - - - 0.993 CNKSR family member 3, transcript variant X2
41. ENSGALG00000008594 ENSGALG00000008594 54 0.992 - - - - - - - - - 0.992
42. UBE3C ENSGALG00000006461 57 0.992 - - - - - - - - - 0.992 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
43. TTI1 ENSGALG00000006791 1218 0.99 - - - - - - - - - 0.990 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
44. VAV2 ENSGALG00000002699 503 0.99 - - - - - - - - - 0.990 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
45. ENSGALG00000018358 ENSGALG00000018358 101 0.99 - - - - - - - - - 0.990
46. AGMO ENSGALG00000010792 76 0.99 - - - - - - - - - 0.990 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
47. ENSGALG00000004772 ENSGALG00000004772 173 0.989 - - - - - - - - - 0.989
48. PTPRE ENSGALG00000009823 250 0.988 - - - - - - - - - 0.988 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
49. DTX2 ENSGALG00000001905 1475 0.987 - - - - - - - - - 0.987 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
50. ENSGALG00000027621 ENSGALG00000027621 863 0.986 - - - - - - - - - 0.986
51. SLC38A1 ENSGALG00000009698 566 0.986 - - - - - - - - - 0.986 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
52. PROCR ENSGALG00000006547 645 0.986 - - - - - - - - - 0.986 protein C receptor [Source:NCBI gene;Acc:424867]
53. TFG ENSGALG00000015299 849 0.986 - - - - - - - - - 0.986 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
54. BCOR ENSGALG00000016245 85 0.986 - - - - - - - - - 0.986 BCL6 corepressor, transcript variant X8
55. MAP3K3 ENSGALG00000000525 115 0.985 - - - - - - - - - 0.985 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
56. RP9 ENSGALG00000035453 1186 0.985 - - - - - - - - - 0.985 retinitis pigmentosa 9 (autosomal dominant)
57. GPR114 GPR114 46 0.985 - - - - - - - - - 0.985
58. STX6 3297 0.985 - - - - - - - - - 0.985 syntaxin 6
59. ZFPM2 ENSGALG00000040079 942 0.985 - - - - - - - - - 0.985 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
60. CENPJ ENSGALG00000017148 1415 0.985 - - - - - - - - - 0.985 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
61. GRPEL2 ENSGALG00000002673 105 0.984 - - - - - - - - - 0.984 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
62. NFKBIE ENSGALG00000044525 633 0.984 - - - - - - - - - 0.984 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
63. TYSND1 ENSGALG00000033807 716 0.982 - - - - - - - - - 0.982 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
64. SERPINB6 ENSGALG00000012866 1582 0.982 - - - - - - - - - 0.982 serpin family B member 6 [Source:NCBI gene;Acc:420895]
65. TNFRSF21 ENSGALG00000016719 2762 0.98 - - - - - - - - - 0.980 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
66. ZNF142 ENSGALG00000011393 2078 0.98 - - - - - - - - - 0.980 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
67. PRICKLE1 ENSGALG00000009556 60 0.98 - - - - - - - - - 0.980 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
68. TRIP4 ENSGALG00000030672 1255 0.978 - - - - - - - - - 0.978 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
69. PCMTD2 ENSGALG00000005901 1833 0.978 - - - - - - - - - 0.978 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
70. TRMT44 ENSGALG00000015594 1490 0.978 - - - - - - - - - 0.978 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
71. TRIM3 ENSGALG00000034004 110 0.977 - - - - - - - - - 0.977 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
72. CTK-1 CTK-1 1618 0.977 - - - - - - - - - 0.977
73. SUPV3L1 ENSGALG00000004197 4141 0.976 - - - - - - - - - 0.976 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
74. FOXP1 127 0.976 - - - - - - - - - 0.976 forkhead box P1, transcript variant X14
75. SHPK ENSGALG00000004637 2386 0.976 - - - - - - - - - 0.976 sedoheptulokinase, transcript variant X1
76. LUZP1 ENSGALG00000025858 947 0.976 - - - - - - - - - 0.976 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
77. RPRD2 ENSGALG00000014656 939 0.975 - - - - - - - - - 0.975 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
78. PDCD7 ENSGALG00000021027 3807 0.975 - - - - - - - - - 0.975 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
79. IFNAR2 ENSGALG00000041867 1596 0.974 - - - - - - - - - 0.974 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
80. EEA1 ENSGALG00000011280 923 0.974 - - - - - - - - - 0.974 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
81. ENSGALG00000004643 ENSGALG00000004643 2297 0.973 - - - - - - - - - 0.973
82. ENSGALG00000001919 ENSGALG00000001919 531 0.973 - - - - - - - - - 0.973
83. CEP57 ENSGALG00000017201 524 0.971 - - - - - - - - - 0.971 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
84. USP36 ENSGALG00000037018 783 0.971 - - - - - - - - - 0.971 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
85. PMVK ENSGALG00000046656 645 0.971 - - - - - - - - - 0.971 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
86. MITF ENSGALG00000039583 865 0.971 - - - - - - - - - 0.971 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
87. FN3K ENSGALG00000001531 208 0.971 - - - - - - - - - 0.971 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
88. RFWD3 2315 0.969 - - - - - - - - - 0.969 ring finger and WD repeat domain 3
89. C5orf24 ENSGALG00000006371 1573 0.968 - - - - - - - - - 0.968 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
90. TRIM24 ENSGALG00000012823 2725 0.967 - - - - - - - - - 0.967 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
91. PRR11 2624 0.967 - - - - - - - - - 0.967 proline rich 11, transcript variant X8
92. FTSJ3 ENSGALG00000032993 8929 0.967 - - - - - - - - - 0.967 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
93. EP3 EP3 741 0.966 - - - - - - - - - 0.966
94. BZFP1 ENSGALG00000027546 632 0.966 - - - - - - - - - 0.966 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
95. PERP PERP 734 0.964 - - - - - - - - - 0.964
96. DUSP23 1663 0.963 - - - - - - - - - 0.963 dual specificity phosphatase 23, transcript variant X1
97. TMEM199 ENSGALG00000023757 10781 0.963 - - - - - - - - - 0.963 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
98. OBFC1 OBFC1 1071 0.963 - - - - - - - - - 0.963
99. PKDCCB ENSGALG00000011166 74 0.962 - - - - - - - - - 0.962 protein kinase domain containing, cytoplasmic b
100. HPS4 ENSGALG00000005595 2217 0.961 - - - - - - - - - 0.961 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]

There are 655 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA