Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RGMA

Gene Name Gene ID Reads Annotation
RGMA ENSGALG00000039173 12874 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]











Genes with expression patterns similar to RGMA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RGMA ENSGALG00000039173 12874 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
2. ENSGALG00000027002 ENSGALG00000027002 7570 3.823 - - - 0.722 - 0.835 0.731 - 0.741 0.794
3. CRMP1B CRMP1B 18633 3.809 - - 0.701 0.770 - 0.742 - - 0.715 0.881
4. NTN3 ENSGALG00000029072 1368 3.352 - - 0.778 0.884 - 0.869 - - - 0.821 netrin 1 [Source:NCBI gene;Acc:396387]
5. TAGLN3 ENSGALG00000015379 7865 3.212 - - - 0.746 - 0.766 - - 0.806 0.894 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
6. MARCKSL1 ENSGALG00000032335 88728 3.149 - - 0.761 - - 0.746 - - 0.825 0.817 MARCKS like 1 [Source:NCBI gene;Acc:770764]
7. TCF15 ENSGALG00000026276 3646 3.057 - - 0.773 0.730 - 0.795 0.759 - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
8. DLL1 ENSGALG00000011182 1613 2.969 - - - 0.723 0.743 - - - 0.707 0.796 delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
9. MYT1 ENSGALG00000005932 2017 2.923 - - 0.710 0.709 - - 0.764 - - 0.740 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
10. HES5 ENSGALG00000001141 6514 2.849 - - - 0.701 - 0.709 0.722 - - 0.717 hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
11. NHLH1 ENSGALG00000025817 1617 2.525 - - - - - 0.864 - - 0.833 0.828 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
12. GPM6A ENSGALG00000043480 2133 2.501 - - 0.796 - - - - - 0.832 0.873 glycoprotein M6A [Source:NCBI gene;Acc:422569]
13. EN1 ENSGALG00000042389 3051 2.468 - - 0.818 - - 0.749 - - - 0.901 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
14. ACTC1 ENSGALG00000009844 20914 2.354 - - 0.703 0.814 - - 0.837 - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
15. SYNPR ENSGALG00000007284 1368 2.343 - - - - - 0.757 - - 0.768 0.818 synaptoporin [Source:NCBI gene;Acc:396359]
16. MYH15 ENSGALG00000015358 6304 2.301 - - - 0.738 - - - - 0.740 0.823 myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
17. MAP6 ENSGALG00000007441 585 2.297 - - - - - - 0.729 - 0.772 0.796 microtubule associated protein 6 [Source:NCBI gene;Acc:395753]
18. MYOZ2 ENSGALG00000011991 714 2.149 - - 0.743 0.701 - - - - - 0.705 myozenin 2 [Source:NCBI gene;Acc:422682]
19. HSPB8 ENSGALG00000007383 5333 2.118 - - - 0.713 - 0.702 0.703 - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
20. TMEFF1 ENSGALG00000013212 4222 1.748 - - - - - - - 0.998 - 0.750 transmembrane protein with EGF-like and two follistatin-like domains 1
21. C1QTNF3 ENSGALG00000027887 8646 1.741 - - - - - 0.853 - - - 0.888 C1q and tumor necrosis factor related protein 3, transcript variant X1
22. HPCAL1 ENSGALG00000016443 6633 1.728 - - 0.909 - - 0.819 - - - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
23. PRDM8 ENSGALG00000038372 928 1.716 - - - - - 0.866 - - - 0.850 PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
24. WSCD2 ENSGALG00000004849 477 1.671 - - - - - 0.823 - - - 0.848 WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
25. TUBB2B ENSGALG00000012821 41535 1.634 - - - - - - - - 0.848 0.786 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
26. MYL1 ENSGALG00000002907 1300 1.621 - - 0.797 0.824 - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
27. TTYH2 ENSGALG00000026940 15628 1.596 - - - - - - - - 0.827 0.769 tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
28. FZD3 ENSGALG00000042308 3356 1.59 - - - - - - - - 0.779 0.811 frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
29. ZBTB18 ENSGALG00000010705 3433 1.582 - - - - - 0.752 - - - 0.830 zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
30. MAP2 ENSGALG00000002789 6597 1.579 - - - - - - - - 0.749 0.830 microtubule associated protein 2, transcript variant X33
31. ELAVL4 ENSGALG00000010533 4978 1.578 - - - - - - - - 0.758 0.820 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
32. MYF5 ENSGALG00000028091 1965 1.576 - - 0.726 - - 0.850 - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
33. GADD45_1 GADD45_1 1433 1.544 - - - - - - 0.720 - - 0.824
34. JSC JSC 7982 1.542 - - - - - 0.841 0.701 - - -
35. CSPG5 ENSGALG00000032184 991 1.527 - - - - - - 0.700 - - 0.827 chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
36. EYA2 ENSGALG00000004508 939 1.523 - - - - - 0.779 - - 0.744 - Gallus gallus EYA transcriptional coactivator and phosphatase 2 (EYA2), mRNA. [Source:RefSeq mRNA;Acc:NM_204915]
37. LDHB ENSGALG00000035836 169726 1.515 - - - - - 0.784 - - 0.731 - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
38. PRTG ENSGALG00000037336 34665 1.515 - - - 0.720 - 0.795 - - - - protogenin [Source:NCBI gene;Acc:415407]
39. NTM ENSGALG00000001437 584 1.514 - - - - - - - - 0.744 0.770 neurotrimin [Source:NCBI gene;Acc:395450]
40. TITIN TITIN 589 1.514 - - - 0.763 - - - - 0.751 -
41. CRABP-I ENSGALG00000003193 67258 1.51 - - - 0.805 - - - - - 0.705 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
42. TNNI1 ENSGALG00000000313 4069 1.51 - - 0.734 - - 0.776 - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
43. SH3RF3 ENSGALG00000016810 2169 1.506 - - 0.728 - - 0.778 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
44. NSG1 ENSGALG00000015010 5829 1.502 - - - - - - - - 0.734 0.768 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
45. ENPP2 ENSGALG00000032746 6086 1.496 - - - - - 0.762 - - - 0.734 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
46. RTN1 ENSGALG00000012006 2438 1.491 - - - - - - - - 0.740 0.751 reticulon 1 [Source:NCBI gene;Acc:378791]
47. TPM1 ENSGALG00000003521 11894 1.489 - - - 0.787 - - 0.702 - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
48. MYOD1 ENSGALG00000006216 568 1.483 - - 0.711 - - 0.772 - - - - myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
49. HES6 ENSGALG00000028415 4830 1.483 - - - - - 0.738 - - - 0.745 hes family bHLH transcription factor 6
50. PAX-6 PAX-6 2650 1.478 - - - - - 0.754 - - - 0.724
51. VTN ENSGALG00000003589 2873 1.473 - - 0.743 - - - - - - 0.730 vitronectin [Source:NCBI gene;Acc:395935]
52. PKM ENSGALG00000001992 93960 1.47 - - - - - 0.709 - - 0.761 - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
53. PTCH1 ENSGALG00000012620 4840 1.467 - - 0.757 - - - 0.710 - - - patched 1 [Source:NCBI gene;Acc:395806]
54. SH3BGR ENSGALG00000016127 2561 1.466 - - - - 0.740 0.726 - - - - SH3 domain binding glutamate rich protein
55. BHMT ENSGALG00000004518 4700 1.463 - - - - 0.727 0.736 - - - - betaine--homocysteine S-methyltransferase
56. MYL2_1 ENSGALG00000004582 2367 1.461 - - 0.745 - - - - - 0.716 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
57. MIF ENSGALG00000006326 109683 1.459 - - 0.711 - - 0.748 - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
58. EPHA3 ENSGALG00000015403 9811 1.458 - - - 0.727 - 0.731 - - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
59. RASSF2 ENSGALG00000030432 4822 1.449 - - - - - - - - 0.716 0.733 Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
60. MYF6 ENSGALG00000010936 1143 1.445 - - - - - 0.720 0.725 - - - myogenic factor 6 [Source:NCBI gene;Acc:417873]
61. UCH-L1 UCH-L1 12697 1.442 - - - - - - - - 0.714 0.728
62. ZNF488 ENSGALG00000005975 82 1.438 - - - - - 0.711 - - - 0.727 zinc finger protein 488, transcript variant X2
63. SCRN1 ENSGALG00000011176 3783 1.428 - - - - - - - - 0.702 0.726 secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
64. ACAT2 ENSGALG00000011659 12825 1.416 - - - - - - - - 0.716 0.700 acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
65. SNAI1 ENSGALG00000008018 3930 0.999 - - - - - - - 0.999 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
66. FAM114A1 ENSGALG00000013583 736 0.998 - - - - - - - 0.998 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
67. DERL3 ENSGALG00000005994 1499 0.998 - - - - - - - 0.998 - - derlin 3 [Source:NCBI gene;Acc:416934]
68. OLFM1 ENSGALG00000002515 1841 0.998 - - - - - - - 0.998 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
69. C10orf76 C10orf76 2424 0.998 - - - - - - - 0.998 - -
70. RFWD3 2315 0.998 - - - - - - - 0.998 - - ring finger and WD repeat domain 3
71. USP3 ENSGALG00000003427 1236 0.998 - - - - - - - 0.998 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
72. WDR47 ENSGALG00000002129 2624 0.998 - - - - - - - 0.998 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
73. SLC43A3 ENSGALG00000020479 1332 0.998 - - - - - - - 0.998 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
74. DIP2C ENSGALG00000006652 1858 0.998 - - - - - - - 0.998 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
75. RRAGD ENSGALG00000026971 2429 0.998 - - - - - - - 0.998 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
76. NUDCD1 ENSGALG00000040879 2965 0.998 - - - - - - - 0.998 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
77. ACL ACL 1813 0.998 - - - - - - - 0.998 - -
78. TOLLIP ENSGALG00000006697 917 0.998 - - - - - - - 0.998 - - toll interacting protein [Source:NCBI gene;Acc:423099]
79. DACH1 ENSGALG00000037015 5648 0.998 - - - - - - - 0.998 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
80. ACTR10 ENSGALG00000012041 2752 0.998 - - - - - - - 0.998 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
81. ENSGALG00000004643 ENSGALG00000004643 2297 0.997 - - - - - - - 0.997 - -
82. PHF12 ENSGALG00000031368 1960 0.997 - - - - - - - 0.997 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
83. HIC2 ENSGALG00000033416 4051 0.997 - - - - - - - 0.997 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
84. SOCS5 ENSGALG00000010016 1134 0.997 - - - - - - - 0.997 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
85. DARS ENSGALG00000012355 2887 0.997 - - - - - - - 0.997 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
86. UBQLN1 ENSGALG00000012585 5158 0.997 - - - - - - - 0.997 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
87. CUTC ENSGALG00000037283 2530 0.997 - - - - - - - 0.997 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
88. CDC123 ENSGALG00000014038 1418 0.997 - - - - - - - 0.997 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
89. TTC39A ENSGALG00000010540 1025 0.997 - - - - - - - 0.997 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
90. LYPLA2 ENSGALG00000004002 3939 0.997 - - - - - - - 0.997 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
91. C3H6ORF120 C3H6ORF120 2712 0.997 - - - - - - - 0.997 - -
92. PI4KA ENSGALG00000040756 3973 0.996 - - - - - - - 0.996 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
93. TRNT1 ENSGALG00000017368 11932 0.995 - - - - - - - 0.995 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
94. PYURF ENSGALG00000039869 5657 0.995 - - - - - - - 0.995 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
95. MFN1 ENSGALG00000041873 4170 0.995 - - - - - - - 0.995 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
96. HCFC2 ENSGALG00000029616 4525 0.994 - - - - - - - 0.994 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
97. DTD2 ENSGALG00000009978 4322 0.994 - - - - - - - 0.994 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
98. SDAD1 ENSGALG00000011543 5191 0.994 - - - - - - - 0.994 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
99. RP2 ENSGALG00000016728 3291 0.994 - - - - - - - 0.994 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
100. NDUFAF2 ENSGALG00000027564 7302 0.994 - - - - - - - 0.994 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]

There are 267 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA