Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RGCC

Gene Name Gene ID Reads Annotation
RGCC ENSGALG00000016954 1282 regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]











Genes with expression patterns similar to RGCC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RGCC ENSGALG00000016954 1282 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
2. HES5 ENSGALG00000001141 6514 2.634 - - - 0.750 0.886 - - 0.998 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
3. DRAXIN ENSGALG00000004631 3122 2.459 - - 0.728 0.758 - - 0.973 - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
4. CSPG5 ENSGALG00000032184 991 2.223 - - - 0.726 0.795 0.702 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
5. NPHP3 ENSGALG00000034586 1465 1.937 - - - - - - 0.938 0.999 - - nephrocystin 3, transcript variant X1
6. BFAR ENSGALG00000003111 1778 1.916 - - - - - - 0.927 0.989 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
7. BPTF ENSGALG00000038222 7521 1.82 - - - - - - 0.891 0.929 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
8. RPA1 ENSGALG00000003072 8023 1.816 - - - - - - 0.897 0.919 - - replication protein A1 [Source:NCBI gene;Acc:417563]
9. AP3S1 ENSGALG00000002341 12388 1.774 - - - - - - 0.816 0.958 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
10. NCAM1 ENSGALG00000007839 19929 1.662 - - - - 0.730 - 0.932 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
11. KIF15 ENSGALG00000036645 9946 1.649 - - - - - - 0.917 0.732 - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
12. PTPRZ1 ENSGALG00000040114 3410 1.621 - - - 0.771 0.850 - - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
13. SF3A3 ENSGALG00000001540 9664 1.613 - - - - - - 0.850 0.763 - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
14. ZIC1 ENSGALG00000040532 6543 1.606 - - - 0.733 - - 0.873 - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
15. CERCAM ENSGALG00000004986 5158 1.549 - - - 0.701 0.848 - - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
16. TRABD2A ENSGALG00000026395 704 1.534 - - - 0.774 0.760 - - - - - TraB domain containing 2A, transcript variant X3
17. LOC769139 ENSGALG00000026754 753 1.534 - - - 0.713 - - - 0.821 - - feather keratin 1-like, transcript variant X2
18. UBR7 ENSGALG00000010842 16488 1.51 - - - - - - 0.703 0.807 - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
19. NDP ENSGALG00000016222 1067 1.502 - - 0.731 0.771 - - - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
20. CRMP1B CRMP1B 18633 1.479 - - - - 0.725 - 0.754 - - -
21. SLC16A2 ENSGALG00000007748 446 0.999 - - - - - - - 0.999 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
22. MAN2A2 ENSGALG00000033790 2717 0.999 - - - - - - - 0.999 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
23. MSC ENSGALG00000037777 1109 0.999 - - - - - - - 0.999 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
24. ACSBG2 ENSGALG00000001749 1681 0.999 - - - - - - - 0.999 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
25. CCM2 ENSGALG00000005612 323 0.999 - - - - - - - 0.999 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
26. AP1S2 ENSGALG00000016551 421 0.999 - - - - - - - 0.999 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
27. PIGG ENSGALG00000015349 314 0.999 - - - - - - - 0.999 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
28. LONRF2 ENSGALG00000016768 193 0.999 - - - - - - - 0.999 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
29. MSANTD1 ENSGALG00000015628 154 0.999 - - - - - - - 0.999 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
30. GOLGA1 ENSGALG00000001025 334 0.999 - - - - - - - 0.999 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
31. APC ENSGALG00000000220 1266 0.998 - - - - - - - 0.998 - - APC, WNT signaling pathway regulator, transcript variant X12
32. C3H6ORF154 C3H6ORF154 1078 0.998 - - - - - - - 0.998 - -
33. CTTN ENSGALG00000007700 709 0.998 - - - - - - - 0.998 - - cortactin [Source:NCBI gene;Acc:396455]
34. IRF2BPL ENSGALG00000041616 2835 0.998 - - - - - - - 0.998 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
35. SLC38A11 ENSGALG00000011052 386 0.998 - - - - - - - 0.998 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
36. CA9 ENSGALG00000021340 1431 0.997 - - - - - - - 0.997 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
37. TBC1D32 ENSGALG00000014876 681 0.997 - - - - - - - 0.997 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
38. ENSGALG00000012564 ENSGALG00000012564 426 0.997 - - - - - - - 0.997 - -
39. ITPR1 ENSGALG00000008294 1226 0.997 - - - - - - - 0.997 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
40. EIF2A ENSGALG00000010401 2201 0.995 - - - - - - - 0.995 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
41. OXSR1 ENSGALG00000005979 2905 0.995 - - - - - - - 0.995 - - oxidative stress responsive 1
42. RAB35 ENSGALG00000007308 6300 0.995 - - - - - - - 0.995 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
43. KIAA1191 ENSGALG00000003370 2599 0.995 - - - - - - - 0.995 - - KIAA1191 [Source:NCBI gene;Acc:416230]
44. USP25 ENSGALG00000015693 2567 0.995 - - - - - - - 0.995 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
45. USP54 ENSGALG00000005232 2749 0.995 - - - - - - - 0.995 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
46. TMF1 ENSGALG00000013408 3344 0.994 - - - - - - - 0.994 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
47. RAB9A ENSGALG00000016579 3262 0.993 - - - - - - - 0.993 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
48. RPP38 ENSGALG00000008794 1057 0.993 - - - - - - - 0.993 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
49. LPAR1 ENSGALG00000015729 3874 0.992 - - - - - - - 0.992 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
50. HSBP1 ENSGALG00000043039 2365 0.991 - - - - - - - 0.991 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
51. ATG13 ENSGALG00000008347 7374 0.99 - - - - - - - 0.990 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
52. UTP20 ENSGALG00000011643 3012 0.989 - - - - - - - 0.989 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
53. TATDN1 ENSGALG00000041072 1585 0.989 - - - - - - - 0.989 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
54. DFFA ENSGALG00000002820 2046 0.989 - - - - - - - 0.989 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
55. TMEM135 2283 0.988 - - - - - - - 0.988 - - transmembrane protein 135, transcript variant X4
56. FBXO28 ENSGALG00000009331 2871 0.988 - - - - - - - 0.988 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
57. HSD17B2 ENSGALG00000005467 275 0.988 - - - - - - - 0.988 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
58. JARID2 ENSGALG00000012702 4280 0.987 - - - - - - - 0.987 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
59. BET1 ENSGALG00000024485 2451 0.987 - - - - - - - 0.987 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
60. TMEM168 ENSGALG00000009443 2452 0.985 - - - - - - - 0.985 - - transmembrane protein 168, transcript variant X1
61. WDFY1 ENSGALG00000005158 2512 0.985 - - - - - - - 0.985 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
62. UBR2 ENSGALG00000009906 7717 0.982 - - - - - - - 0.982 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
63. OSR2 ENSGALG00000037695 2010 0.981 - - - - - - - 0.981 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
64. KLF5 ENSGALG00000016927 1080 0.981 - - - - - - - 0.981 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
65. GCN1L1 GCN1L1 4601 0.98 - - - - - - - 0.980 - -
66. POLA1 ENSGALG00000016312 9440 0.977 - - - - - - 0.977 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
67. COPG2 ENSGALG00000008144 4542 0.977 - - - - - - - 0.977 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
68. AFAP1L2 ENSGALG00000008999 1305 0.976 - - - - - - - 0.976 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
69. SFRP2 ENSGALG00000009241 4716 0.976 - - - - - - - 0.976 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
70. MGAT4B ENSGALG00000005924 2663 0.975 - - - - - - - 0.975 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
71. CDC23 ENSGALG00000007610 11945 0.973 - - - - - - - 0.973 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
72. SIGMAR1 ENSGALG00000028996 12267 0.971 - - - - - - - 0.971 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
73. CDC7 ENSGALG00000006051 3996 0.971 - - - - - - - 0.971 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
74. NFU1 ENSGALG00000030200 6882 0.969 - - - - - - - 0.969 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
75. CHMP7 ENSGALG00000000409 8967 0.968 - - - - - - 0.968 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
76. HECTD1 ENSGALG00000009946 1946 0.967 - - - - - - - 0.967 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
77. PMPCB ENSGALG00000008280 6357 0.967 - - - - - - - 0.967 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
78. EMG1 ENSGALG00000014568 8102 0.966 - - - - - - - 0.966 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
79. MYBBP1A ENSGALG00000001363 10331 0.963 - - - - - - - 0.963 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
80. ACOT13 ENSGALG00000013632 5550 0.962 - - - - - - - 0.962 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
81. CXorf56 ENSGALG00000008652 7848 0.96 - - - - - - - 0.960 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
82. PRCP ENSGALG00000037521 4012 0.958 - - - - - - 0.958 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
83. SLC25A14 ENSGALG00000004063 5574 0.957 - - - - - - 0.957 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
84. MED7 ENSGALG00000003870 4244 0.957 - - - - - - 0.957 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
85. LYPD6B ENSGALG00000028759 831 0.956 - - - - - - - 0.956 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
86. TGS1 ENSGALG00000015340 5897 0.956 - - - - - - - 0.956 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
87. WDR11 ENSGALG00000035013 3393 0.956 - - - - - - - 0.956 - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
88. LATS1 ENSGALG00000012386 3455 0.955 - - - - - - - 0.955 - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
89. ZMYM2 ENSGALG00000017139 3747 0.953 - - - - - - 0.953 - - - zinc finger MYM-type containing 2, transcript variant X10
90. DISP1 3281 0.952 - - - - - - 0.952 - - - dispatched RND transporter family member 1, transcript variant X3
91. DDX47 ENSGALG00000011794 4255 0.951 - - - - - - - 0.951 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
92. CYP51A1 ENSGALG00000009365 6996 0.951 - - - - - - - 0.951 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
93. UBA3 ENSGALG00000013410 6923 0.95 - - - - - - 0.950 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
94. INTS10 ENSGALG00000010130 6320 0.95 - - - - - - 0.950 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
95. GCC2 ENSGALG00000016806 1085 0.949 - - - - - - 0.949 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
96. UBAC1 ENSGALG00000042564 598 0.948 - - - - - - 0.948 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
97. IMPACT ENSGALG00000015093 1334 0.948 - - - - - - 0.948 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
98. LMNB2 ENSGALG00000000470 4364 0.948 - - - - - - 0.948 - - - lamin B2 [Source:NCBI gene;Acc:396222]
99. CETN2 ENSGALG00000007510 1688 0.948 - - - - - - 0.948 - - - centrin 2 [Source:NCBI gene;Acc:422303]
100. SDCCAG8 ENSGALG00000010713 311 0.947 - - - - - - 0.947 - - - serologically defined colon cancer antigen 8, transcript variant X5

There are 243 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA