Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFXAP

Gene Name Gene ID Reads Annotation
RFXAP ENSGALG00000019087 37 regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]











Genes with expression patterns similar to RFXAP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFXAP ENSGALG00000019087 37 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
2. DPP10 ENSGALG00000012156 20 1.797 - - - 0.956 - - - - - 0.841 dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
3. SIDT1 ENSGALG00000014812 20 1.683 - - - - 0.758 - - - - 0.925 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
4. LACE1 LACE1 74 1 - - - - - - - 1.000 - -
5. TMEM178B ENSGALG00000028444 31 0.988 - - - - - - - 0.988 - - transmembrane protein 178B [Source:NCBI gene;Acc:418120]
6. VWA1 ENSGALG00000001527 79 0.988 - - - - - - - 0.988 - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
7. TMC6 ENSGALG00000038875 6 0.988 - - - - - - - 0.988 - - transmembrane channel like 6 [Source:HGNC Symbol;Acc:HGNC:18021]
8. CACNG3 ENSGALG00000038087 12 0.956 - - - 0.956 - - - - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
9. PTBP3 ENSGALG00000015669 16 0.956 - - - 0.956 - - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
10. ZBTB21 ENSGALG00000016147 13 0.956 - - - 0.956 - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
11. UBAP1 ENSGALG00000021378 11 0.956 - - - 0.956 - - - - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
12. CAD19 CAD19 17 0.956 - - - 0.956 - - - - - -
13. LAMP3 ENSGALG00000008759 2 0.956 - - - 0.956 - - - - - - lysosomal associated membrane protein 3 [Source:NCBI gene;Acc:424961]
14. Metazoa Metazoa 5 0.956 - - - 0.956 - - - - - -
15. SARM1 ENSGALG00000003595 15 0.956 - - - 0.956 - - - - - - sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]
16. ETNK2 ENSGALG00000000557 4 0.956 - - - 0.956 - - - - - - ethanolamine kinase 2 [Source:HGNC Symbol;Acc:HGNC:25575]
17. ENSGALG00000022751 ENSGALG00000022751 1 0.956 - - - 0.956 - - - - - -
18. FAM187A ENSGALG00000000918 1 0.956 - - - 0.956 - - - - - - family with sequence similarity 187 member A, transcript variant X2
19. USP49 ENSGALG00000003461 10 0.956 - - - 0.956 - - - - - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
20. MBL2 ENSGALG00000002507 17 0.956 - - - 0.956 - - - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
21. CDCP2 ENSGALG00000010752 4 0.956 - - - 0.956 - - - - - - CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
22. PRSS56 ENSGALG00000045413 17 0.956 - - - 0.956 - - - - - - serine protease 56 [Source:HGNC Symbol;Acc:HGNC:39433]
23. ENSGALG00000018358 ENSGALG00000018358 101 0.956 - - - 0.956 - - - - - -
24. C1orf112 ENSGALG00000032743 8 0.956 - - - 0.956 - - - - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
25. TRIM66 ENSGALG00000005958 5 0.956 - - - 0.956 - - - - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
26. C2orf71 1 0.956 - - - 0.956 - - - - - - chromosome 2 open reading frame 71
27. ARHGAP31 ENSGALG00000015077 19 0.956 - - - 0.956 - - - - - - Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:HGNC:29216]
28. B4GALT2 ENSGALG00000010094 36 0.956 - - - 0.956 - - - - - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
29. LOC100858814 ENSGALG00000028210 3 0.956 - - - 0.956 - - - - - - adenine phosphoribosyltransferase-like, transcript variant X1
30. FZD10 ENSGALG00000042003 11 0.956 - - - 0.956 - - - - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
31. NTRK2 ENSGALG00000012594 24 0.947 - - - - - - - 0.947 - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
32. FBXL4 ENSGALG00000015490 12 0.933 - - - - - - - - - 0.933 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
33. PNMT ENSGALG00000027281 14 0.931 - - - - - - - - - 0.931 phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
34. PSEN2 ENSGALG00000009073 7 0.93 - - - - - - - 0.930 - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
35. ENSGALG00000026925 ENSGALG00000026925 119 0.928 - - - - - - - - - 0.928
36. ARL15 ENSGALG00000014911 13 0.926 - - - - - - - - - 0.926 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
37. PSTPIP1 ENSGALG00000002786 9 0.925 - - - - - - - - - 0.925 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
38. CNTNAP4 ENSGALG00000023179 13 0.925 - - - - - - - - - 0.925 contactin associated protein like 4
39. DRAM1 ENSGALG00000012761 53 0.925 - - - - - - - - - 0.925 DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
40. DSTYK ENSGALG00000041123 12 0.925 - - - - - - - - - 0.925 dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
41. CCR4 ENSGALG00000039146 20 0.925 - - - - - - - - - 0.925 C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
42. NAGPA 5 0.925 - - - - - - - - - 0.925 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, transcript variant X5
43. TRH ENSGALG00000008490 16 0.925 - - - - - - - - - 0.925 thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
44. ENSGALG00000020700 ENSGALG00000020700 44 0.921 - - - - - - - - - 0.921
45. MOCS1 ENSGALG00000010051 70 0.917 - - - - - - - - - 0.917 molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
46. MUC6 ENSGALG00000040530 11 0.916 - - - - - - - - - 0.916 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
47. PCDH12 ENSGALG00000002544 36 0.916 - - - - - - - - - 0.916 protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
48. DRD2 ENSGALG00000007794 399 0.914 - - - - - - - - - 0.914 dopamine receptor D2 [Source:NCBI gene;Acc:428252]
49. ISOC1 ENSGALG00000000161 46 0.914 - - - - - - - - - 0.914 isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
50. SAPCD2 12 0.913 - - - - - - - - - 0.913 suppressor APC domain containing 2, transcript variant X1
51. CXorf30 CXorf30 172 0.912 - - - - - - - - - 0.912
52. SH3RF1 ENSGALG00000009692 46 0.912 - - - - - - - - - 0.912 SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
53. RAB2A ENSGALG00000015450 990 0.909 - - - - - - - - - 0.909 RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
54. SK2 SK2 74 0.909 - - - - - - - 0.909 - -
55. MOCOS ENSGALG00000013149 25 0.909 - - - - - - - - - 0.909 molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
56. ENSGALG00000016601 ENSGALG00000016601 16 0.907 - - - - - - - - - 0.907
57. SOX8 ENSGALG00000005263 218 0.905 - - - 0.905 - - - - - - SRY-box 8 [Source:NCBI gene;Acc:395483]
58. SNTG2 ENSGALG00000016367 42 0.904 - - - - - - - - - 0.904 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
59. IKBIP ENSGALG00000026284 31 0.902 - - - - - - - - - 0.902 IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
60. PCSK1 ENSGALG00000014681 73 0.902 - - - - - - - - - 0.902 proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
61. DPYS ENSGALG00000039011 54 0.901 - - - - - - - - - 0.901 dihydropyrimidinase [Source:NCBI gene;Acc:420266]
62. CYYR1 ENSGALG00000015774 1 0.897 - - - 0.897 - - - - - - cysteine and tyrosine rich 1 [Source:HGNC Symbol;Acc:HGNC:16274]
63. CENPA ENSGALG00000037735 171 0.897 - - - 0.897 - - - - - - centromere protein A [Source:NCBI gene;Acc:100113359]
64. ATHL1 ATHL1 16 0.892 - - - - - - - - - 0.892
65. ZDHHC20 ENSGALG00000017126 58 0.889 - - - - - - - - - 0.889 zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
66. ENSGALG00000020877 ENSGALG00000020877 36 0.886 - - - - - - - - - 0.886
67. C5 ENSGALG00000001565 142 0.886 - - - - - - - - - 0.886 complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
68. ENSGALG00000002020 ENSGALG00000002020 183 0.885 - - - - - - - - - 0.885
69. RNASET2 ENSGALG00000011426 40 0.883 - - - - - - - - - 0.883 ribonuclease T2 [Source:NCBI gene;Acc:421569]
70. BAP1 ENSGALG00000004366 12 0.88 - - - 0.880 - - - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
71. IGSF10 ENSGALG00000044293 30 0.88 - - - 0.880 - - - - - - immunoglobulin superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:26384]
72. gga-mir-1600 ENSGALG00000025438 248 0.876 - - - - - 0.876 - - - - gga-mir-1600 [Source:miRBase;Acc:MI0007327]
73. RAB3B ENSGALG00000010567 894 0.875 - - - - - - - - - 0.875 RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
74. AZI2 ENSGALG00000011428 24 0.869 - - - - - - - - - 0.869 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
75. IFT80 ENSGALG00000009559 57 0.864 - - - - - - - - - 0.864 intraflagellar transport 80 [Source:HGNC Symbol;Acc:HGNC:29262]
76. TRERF1 ENSGALG00000009896 42 0.86 - - - - - - - - - 0.860 transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
77. EFNA5 ENSGALG00000000280 308 0.86 - - - - - - - - - 0.860 ephrin A5 [Source:NCBI gene;Acc:396100]
78. QSOX1 ENSGALG00000003933 184 0.86 - - - - - - - - - 0.860 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
79. NCALD ENSGALG00000032518 42 0.858 - - - - - - - - - 0.858 neurocalcin delta [Source:NCBI gene;Acc:396048]
80. EXTL2 ENSGALG00000027984 808 0.846 - - - - - - - - - 0.846 exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
81. MALL ENSGALG00000023882 241 0.846 - - - - - - - - - 0.846 mal, T-cell differentiation protein like [Source:NCBI gene;Acc:421222]
82. CCDC181 ENSGALG00000015221 10 0.845 - - - 0.845 - - - - - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
83. MYOF ENSGALG00000006705 793 0.841 - - - - - - - - - 0.841 myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
84. NFKBIA ENSGALG00000027864 1158 0.839 - - - - - - - - - 0.839 NFKB inhibitor alpha [Source:NCBI gene;Acc:396093]
85. SLC6A6 ENSGALG00000006425 31 0.838 - - - - - - - - - 0.838 solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
86. FIGNL1 ENSGALG00000026363 2194 0.837 - - - - - - - - - 0.837 fidgetin like 1, transcript variant X2
87. MYLK3 ENSGALG00000004334 13 0.835 - - - 0.835 - - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
88. TAB3 ENSGALG00000016284 40 0.834 - - - - - - - - - 0.834 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
89. SNORA71 SNORA71 84 0.832 - - - - - - - - - 0.832
90. USP19 ENSGALG00000006824 44 0.83 - - - - - - - - - 0.830 ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
91. ENSGALG00000000346 ENSGALG00000000346 130 0.826 - - - - - - - - - 0.826
92. KHDRBS2 ENSGALG00000016276 110 0.825 - - - - - - - - - 0.825 KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
93. ENSGALG00000007525 ENSGALG00000007525 48 0.825 - - - - - - - - - 0.825
94. ULK3 ENSGALG00000032215 1499 0.823 - - - - - - - - - 0.823 unc-51 like kinase 3 [Source:NCBI gene;Acc:769780]
95. SNTB2 ENSGALG00000027482 44 0.822 - - - - - - - - - 0.822 syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
96. FAM83A ENSGALG00000041748 8 0.821 - - - 0.821 - - - - - - family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
97. ENSGALG00000026142 ENSGALG00000026142 85 0.821 - - - - - - - - - 0.821
98. VIP ENSGALG00000013604 153 0.82 - - - - - - - - - 0.820 vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
99. CHRM2 ENSGALG00000012894 21 0.82 - - - - - - - - - 0.820 cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
100. CENPQ ENSGALG00000016692 293 0.818 - - - - - - - - - 0.818 centromere protein Q [Source:NCBI gene;Acc:422048]

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA