Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RFX7

Gene Name Gene ID Reads Annotation
RFX7 885 regulatory factor X, 7










Genes with expression patterns similar to RFX7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RFX7 885 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulatory factor X, 7
2. heg heg 559 1.65 - 0.928 - 0.722 - - - - -
3. CR407594.2 CR407594.2 145 1.623 - - - - 0.711 - 0.912 - -
4. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 1.59 - - - 0.749 - - - 0.841 - pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
5. thap7 ENSDARG00000070704 225 1.573 - - - - - - 0.817 0.756 - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
6. ogfod1 ENSDARG00000036061 417 1.561 - 0.816 - - - - 0.745 - - 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3294]
7. ccdc85ca ENSDARG00000005232 3218 1.557 - - - - - 0.765 0.792 - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
8. creb1a ENSDARG00000053586 5068 1.554 - - - - - 0.759 - - 0.795 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
9. C4H12orf5 C4H12orf5 158 1.551 - 0.828 - - - - - 0.723 -
10. FNBP4 ENSDARG00000051800 2839 1.538 - - - - - - 0.824 - 0.714 formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
11. UBE2S ENSDARG00000031775, ENSDARG00000114827 1890 1.523 - - - - - - - 0.806 0.717 ubiquitin-conjugating enzyme E2S [Source:ZFIN;Acc:ZDB-GENE-050913-92]
12. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 1.522 - 0.725 - - - - 0.797 - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
13. dcaf7 ENSDARG00000054355 3517 1.518 - - - - - 0.766 - - 0.752 ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
14. exosc2 ENSDARG00000028688 726 1.517 - 0.700 - - - - 0.817 - - exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
15. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.511 - - - - - 0.796 - - 0.715 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
16. hoxb2a ENSDARG00000000175 1122 1.508 - - - - - 0.708 0.800 - - homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
17. CABZ01080116.1 CABZ01080116.1 407 1.498 - - - - - - 0.718 0.780 -
18. cetn2 ENSDARG00000101510 541 1.485 - 0.744 - - - - 0.741 - - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
19. sumo3a ENSDARG00000028119 13447 1.482 - - - - - 0.711 - - 0.771 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
20. sh2d3ca ENSDARG00000028099 1037 1.476 - - - - - 0.769 - 0.707 - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
21. pik3c2a ENSDARG00000060841 785 1.476 - - - 0.725 - - 0.751 - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-030328-39]
22. gpt2 ENSDARG00000012199 1415 1.469 - 0.722 - - - - 0.747 - - glutamic pyruvate transaminase (alanine aminotransferase) 2 [Source:ZFIN;Acc:ZDB-GENE-030729-8]
23. api5 ENSDARG00000033597 6655 1.468 - - - - - 0.734 0.734 - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
24. mapre1b ENSDARG00000002659 9119 1.464 - - - - - 0.712 - - 0.752 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
25. AGO1 ENSDARG00000092644 4521 1.456 - - - - - 0.707 - - 0.749 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
26. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.451 - - - - - 0.750 - - 0.701 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
27. BX004880.2 BX004880.2 83 1.451 - 0.747 - - - - - 0.704 -
28. KLF16 KLF16 3773 1.446 - - - - - 0.701 - 0.745 -
29. msl2a ENSDARG00000038909 1357 1.443 - - - - - 0.732 - - 0.711 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
30. tatdn3 ENSDARG00000054076 130 1.442 0.709 - - - - - - 0.733 - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
31. arhgef2 ENSDARG00000075819 2173 1.431 - - - 0.723 - - - - 0.708 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
32. nrarpb ENSDARG00000018958 6225 1.429 - - - - - 0.720 - - 0.709 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
33. rhoaa ENSDARG00000026845 6900 1.428 - - - - - 0.723 - - 0.705 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
34. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.427 - - - 0.723 - - - - 0.704 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
35. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.417 - - - - - - - 0.709 0.708 neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
36. pogza ENSDARG00000054778 1495 1.406 - - - 0.700 - - - - 0.706 pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
37. myef2 ENSDARG00000059398 6050 1.402 - - - - - 0.701 - - 0.701 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
38. lace1a lace1a 561 0.939 - - - - - - 0.939 - -
39. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 0.923 - - - - - - 0.923 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
40. DENND4B ENSDARG00000102914 1001 0.921 - - - - - - 0.921 - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
41. sema3fa ENSDARG00000011163 759 0.92 - - - - - - 0.920 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
42. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.92 - - - - - - 0.920 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
43. otud4 ENSDARG00000077810 120 0.92 - - - - - - 0.920 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
44. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 0.918 - - - - - - 0.918 - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
45. zgc:171489 ENSDARG00000052300 119 0.917 - - - - - - 0.917 - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
46. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 0.917 - - - - - - 0.917 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
47. CT867948.2 CT867948.2 131 0.916 - - - - - - 0.916 - -
48. gpn2 ENSDARG00000103127 304 0.914 - - - - - - 0.914 - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
49. ap2m1b ENSDARG00000033899 317 0.912 - - - - - - 0.912 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
50. LRCH1 ENSDARG00000078778 407 0.911 - - - - - - 0.911 - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
51. LYAR ENSDARG00000098507 1506 0.911 - - - - - - 0.911 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
52. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.91 - - - - - - 0.910 - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
53. C2H5orf22 C2H5orf22 196 0.909 - 0.909 - - - - - - -
54. si:dkey-7l6.3 ENSDARG00000094514 146 0.909 - - - - - - 0.909 - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
55. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.909 - - - - - - 0.909 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
56. gnptg ENSDARG00000038566 259 0.908 - - - - - - 0.908 - - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
57. tmem101 ENSDARG00000114508 494 0.908 - - - - - - 0.908 - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
58. tek ENSDARG00000028663 167 0.907 - 0.907 - - - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
59. BX465186.1 ENSDARG00000093047 28 0.906 - - - - - - 0.906 - -
60. cdk10 ENSDARG00000034256 166 0.906 - - - - - - 0.906 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
61. tmem187 ENSDARG00000051989 136 0.905 - - - - - - 0.905 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
62. si:ch211-208h1.1 si:ch211-208h1.1 262 0.905 - - - - - - 0.905 - -
63. tbcela ENSDARG00000002682 1179 0.905 - - - - - - 0.905 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
64. adam19b ENSDARG00000067545 162 0.904 - - - - - - 0.904 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
65. si:ch211-162i8.5 ENSDARG00000111716 76 0.904 - - - - - - 0.904 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
66. si:dkey-102c8.1 si:dkey-102c8.1 85 0.903 - - - - - - 0.903 - -
67. hivep3b ENSDARG00000037154 114 0.903 - - - - - - 0.903 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
68. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.902 - - - - - - 0.902 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
69. si:ch211-66k16.20 si:ch211-66k16.20 162 0.9 - - - - - - 0.900 - -
70. xpnpep3 ENSDARG00000007916 166 0.9 - - - - - - 0.900 - - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
71. si:dkey-182i3.9 ENSDARG00000096575 56 0.9 - - - - - - 0.900 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
72. slc52a3 ENSDARG00000042737 67 0.9 - - - - - - 0.900 - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
73. si:dkey-243i1.1 ENSDARG00000034227 257 0.9 - - - - - - 0.900 - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
74. rnf19b ENSDARG00000060926 157 0.899 - - - - - - 0.899 - - ring finger protein 19B [Source:ZFIN;Acc:ZDB-GENE-060503-281]
75. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.898 - - - - - - 0.898 - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
76. HIST2H4A HIST2H4A 33 0.896 - - - - - - 0.896 - -
77. ftr56 ENSDARG00000030954 23 0.896 - - - - - - 0.896 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
78. KCNK7 ENSDARG00000057331 5 0.896 - - - - - - 0.896 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
79. si:ch211-38m6.6 ENSDARG00000076959 12 0.896 - - - - - - 0.896 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
80. CABZ01058107.1 ENSDARG00000112826 8 0.896 - - - - - - 0.896 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
81. EVA1B EVA1B 22 0.896 - - - - - - 0.896 - -
82. acss1 ENSDARG00000044142, ENSDARG00000109700 516 0.896 - - - - - - 0.896 - - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
83. mxtx1 ENSDARG00000069382 32 0.896 - - - - - - 0.896 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
84. saga ENSDARG00000012610 63 0.896 - - - - - - 0.896 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
85. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.896 - - - - - - 0.896 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
86. si:ch211-106g4.2 si:ch211-106g4.2 6 0.896 - - - - - - 0.896 - -
87. crtac1a ENSDARG00000059826 22 0.896 - - - - - - 0.896 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
88. myo3a ENSDARG00000010186 117 0.894 - - - - - - 0.894 - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
89. NGFR NGFR 186 0.894 - - - - - - 0.894 - -
90. fam102aa ENSDARG00000102566 903 0.894 - - - - - - 0.894 - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
91. BX324198.2 BX324198.2 84 0.894 - - - - - - 0.894 - -
92. FAM188B FAM188B 145 0.894 - - - - - - 0.894 - -
93. pcdh15a ENSDARG00000098257 103 0.893 - 0.893 - - - - - - - protocadherin-related 15a [Source:ZFIN;Acc:ZDB-GENE-030616-3]
94. MFSD3 MFSD3 407 0.892 - - - - - - 0.892 - -
95. abca4a ENSDARG00000057169 27 0.892 - - - - - - 0.892 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
96. BX548021.2_1 BX548021.2_1 164 0.892 - - - - - - 0.892 - -
97. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 0.891 - - - - - - 0.891 - - ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
98. phpt1 ENSDARG00000045567 211 0.889 - - - - - - 0.889 - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
99. fbxw2 ENSDARG00000009745 618 0.889 - - - - - - 0.889 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
100. si:ch211-74m13.3 ENSDARG00000076144 55 0.888 - - - - - - 0.888 - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]

There are 991 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA