Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFWD3

Gene Name Gene ID Reads Annotation
RFWD3 2315 ring finger and WD repeat domain 3











Genes with expression patterns similar to RFWD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFWD3 2315 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring finger and WD repeat domain 3
2. ENSGALG00000004643 ENSGALG00000004643 2297 1.949 - - - - - - - 0.998 - 0.951
3. LYPLA2 ENSGALG00000004002 3939 1.798 - - - - - - - 0.998 - 0.800 lysophospholipase II [Source:NCBI gene;Acc:419685]
4. PI4KA ENSGALG00000040756 3973 1.772 - - - - - - 0.775 0.997 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
5. ABL ABL 9532 1.743 - - - - - - 0.763 0.980 - -
6. MLST8 ENSGALG00000005878 8116 1.733 - - - - - - 0.800 - - 0.933 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
7. TMEFF1 ENSGALG00000013212 4222 1.722 - - - - - - 0.724 0.998 - - transmembrane protein with EGF-like and two follistatin-like domains 1
8. DHFR ENSGALG00000026757 18478 1.719 - - - - - - - 0.973 - 0.746 dihydrofolate reductase [Source:NCBI gene;Acc:427317]
9. TRMT44 ENSGALG00000015594 1490 1.713 - - - - - - 0.767 - - 0.946 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
10. ZNF639 ENSGALG00000005944 6387 1.703 - - - - - - - 0.990 - 0.713 zinc finger protein 639 [Source:NCBI gene;Acc:425280]
11. NUPL1 NUPL1 8197 1.675 - - - - - - 0.781 0.894 - -
12. STAM ENSGALG00000035287 7649 1.651 - - - - - - - 0.870 - 0.781 signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
13. ANKRA2 ENSGALG00000013511 3460 1.649 - - - - - - 0.715 - - 0.934 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
14. TOR1AIP1 ENSGALG00000029238 5843 1.626 - - - - - - 0.765 - - 0.861 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
15. CREG2 ENSGALG00000040947 1279 1.616 - - - - - - 0.705 - - 0.911 cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]
16. MRPL15 ENSGALG00000041086 16820 1.563 - - - - - - 0.761 - - 0.802 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
17. POLE2 ENSGALG00000012237 9023 1.558 - - - - - - 0.739 - - 0.819 DNA polymerase epsilon 2, accessory subunit [Source:NCBI gene;Acc:423567]
18. VMA21 ENSGALG00000009065 6432 1.485 - - - - - - 0.700 - - 0.785 VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
19. METRNL ENSGALG00000028354 25565 1.475 - - - - - - 0.767 - - 0.708 meteorin like, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:27584]
20. CTBP1 ENSGALG00000039942 9383 1.468 - - - - - - 0.742 0.726 - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
21. FBXO30 ENSGALG00000041684 3033 1.464 - - - - - - 0.738 - - 0.726 F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
22. UBE2R2 ENSGALG00000001668 9234 1.451 - - - - - - 0.721 0.730 - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
23. RGMA ENSGALG00000039173 12874 0.998 - - - - - - - 0.998 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
24. CDC123 ENSGALG00000014038 1418 0.998 - - - - - - - 0.998 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
25. CUTC ENSGALG00000037283 2530 0.998 - - - - - - - 0.998 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
26. NUDCD1 ENSGALG00000040879 2965 0.998 - - - - - - - 0.998 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
27. RRAGD ENSGALG00000026971 2429 0.998 - - - - - - - 0.998 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
28. ACTR10 ENSGALG00000012041 2752 0.998 - - - - - - - 0.998 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
29. DACH1 ENSGALG00000037015 5648 0.998 - - - - - - - 0.998 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
30. TOLLIP ENSGALG00000006697 917 0.998 - - - - - - - 0.998 - - toll interacting protein [Source:NCBI gene;Acc:423099]
31. ACL ACL 1813 0.998 - - - - - - - 0.998 - -
32. C10orf76 C10orf76 2424 0.998 - - - - - - - 0.998 - -
33. PHF12 ENSGALG00000031368 1960 0.998 - - - - - - - 0.998 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
34. OLFM1 ENSGALG00000002515 1841 0.998 - - - - - - - 0.998 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
35. DERL3 ENSGALG00000005994 1499 0.998 - - - - - - - 0.998 - - derlin 3 [Source:NCBI gene;Acc:416934]
36. FAM114A1 ENSGALG00000013583 736 0.998 - - - - - - - 0.998 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
37. SLC43A3 ENSGALG00000020479 1332 0.998 - - - - - - - 0.998 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
38. DARS ENSGALG00000012355 2887 0.998 - - - - - - - 0.998 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
39. WDR47 ENSGALG00000002129 2624 0.998 - - - - - - - 0.998 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
40. C3H6ORF120 C3H6ORF120 2712 0.997 - - - - - - - 0.997 - -
41. TTC39A ENSGALG00000010540 1025 0.997 - - - - - - - 0.997 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
42. HIC2 ENSGALG00000033416 4051 0.997 - - - - - - - 0.997 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
43. DIP2C ENSGALG00000006652 1858 0.997 - - - - - - - 0.997 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
44. USP3 ENSGALG00000003427 1236 0.997 - - - - - - - 0.997 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
45. SOCS5 ENSGALG00000010016 1134 0.997 - - - - - - - 0.997 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
46. UBQLN1 ENSGALG00000012585 5158 0.996 - - - - - - - 0.996 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
47. PYURF ENSGALG00000039869 5657 0.996 - - - - - - - 0.996 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
48. DTD2 ENSGALG00000009978 4322 0.996 - - - - - - - 0.996 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
49. SNAI1 ENSGALG00000008018 3930 0.996 - - - - - - - 0.996 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
50. RP2 ENSGALG00000016728 3291 0.995 - - - - - - - 0.995 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
51. HCFC2 ENSGALG00000029616 4525 0.995 - - - - - - - 0.995 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
52. MFN1 ENSGALG00000041873 4170 0.995 - - - - - - - 0.995 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
53. SDAD1 ENSGALG00000011543 5191 0.995 - - - - - - - 0.995 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
54. NDUFAF2 ENSGALG00000027564 7302 0.994 - - - - - - - 0.994 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
55. LONP1 ENSGALG00000040492 7133 0.994 - - - - - - - 0.994 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
56. TRNT1 ENSGALG00000017368 11932 0.994 - - - - - - - 0.994 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
57. NABP1 ENSGALG00000025884 4195 0.993 - - - - - - - 0.993 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
58. SYNE2 ENSGALG00000011811 5542 0.992 - - - - - - - 0.992 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
59. TP53INP1 ENSGALG00000041353 6890 0.992 - - - - - - - 0.992 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
60. PITX3 ENSGALG00000005613 1518 0.99 - - - - - - - 0.990 - - paired like homeodomain 3
61. ZC3H6 ENSGALG00000008269 10353 0.989 - - - - - - - 0.989 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
62. DYRK2 ENSGALG00000009901 3141 0.988 - - - - - - - 0.988 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
63. DCAF7 ENSGALG00000000510 8681 0.985 - - - - - - - 0.985 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
64. ST5 6869 0.984 - - - - - - - 0.984 - - suppression of tumorigenicity 5, transcript variant X1
65. PDZD11 ENSGALG00000004198 11484 0.984 - - - - - - - 0.984 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
66. MICU3 ENSGALG00000013661 1466 0.982 - - - - - - - 0.982 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
67. HAPLN1 ENSGALG00000015627 14942 0.982 - - - - - - - 0.982 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
68. USP9X ENSGALG00000016236 9419 0.982 - - - - - - - 0.982 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
69. PPP3CB ENSGALG00000005243 8794 0.981 - - - - - - - 0.981 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
70. COMMD7 ENSGALG00000006630 11491 0.979 - - - - - - - 0.979 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
71. GALNT1 ENSGALG00000013135 13583 0.976 - - - - - - - 0.976 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
72. TFIP11 ENSGALG00000005623 7784 0.972 - - - - - - - 0.972 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
73. AGMO ENSGALG00000010792 76 0.972 - - - - - - - - - 0.972 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
74. VAV2 ENSGALG00000002699 503 0.97 - - - - - - - - - 0.970 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
75. RGP1 ENSGALG00000002394 5937 0.969 - - - - - - - - - 0.969 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
76. ADAMTS12 55 0.969 - - - - - - - - - 0.969 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
77. SAMHD1 ENSGALG00000001231 5218 0.969 - - - - - - - 0.969 - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
78. TTI1 ENSGALG00000006791 1218 0.968 - - - - - - - - - 0.968 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
79. TM6SF2 ENSGALG00000029015 109 0.968 - - - - - - - - - 0.968 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
80. SOS2 ENSGALG00000012273 41 0.968 - - - - - - - - - 0.968 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
81. CNKSR3 ENSGALG00000027159 41 0.968 - - - - - - - - - 0.968 CNKSR family member 3, transcript variant X2
82. MAP3K8 ENSGALG00000007356 188 0.968 - - - - - - - - - 0.968 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
83. ENSGALG00000004772 ENSGALG00000004772 173 0.967 - - - - - - - - - 0.967
84. ENSGALG00000008594 ENSGALG00000008594 54 0.967 - - - - - - - - - 0.967
85. BCOR ENSGALG00000016245 85 0.966 - - - - - - - - - 0.966 BCL6 corepressor, transcript variant X8
86. PTPRE ENSGALG00000009823 250 0.966 - - - - - - - - - 0.966 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
87. UBE3C ENSGALG00000006461 57 0.966 - - - - - - - - - 0.966 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
88. ATP2B2 ENSGALG00000030908 584 0.965 - - - - - - - - - 0.965 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
89. RGL1 ENSGALG00000004728 3004 0.965 - - - - - - - 0.965 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
90. CENPJ ENSGALG00000017148 1415 0.965 - - - - - - - - - 0.965 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
91. CTK-1 CTK-1 1618 0.965 - - - - - - - - - 0.965
92. PDCD4 ENSGALG00000008700 574 0.964 - - - - - - - - - 0.964 programmed cell death 4 [Source:NCBI gene;Acc:374191]
93. SERPINB6 ENSGALG00000012866 1582 0.963 - - - - - - - - - 0.963 serpin family B member 6 [Source:NCBI gene;Acc:420895]
94. ZNF142 ENSGALG00000011393 2078 0.963 - - - - - - - - - 0.963 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
95. DTX2 ENSGALG00000001905 1475 0.963 - - - - - - - - - 0.963 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
96. STX6 3297 0.963 - - - - - - - - - 0.963 syntaxin 6
97. ENSGALG00000018358 ENSGALG00000018358 101 0.963 - - - - - - - - - 0.963
98. TMEM120B ENSGALG00000004254 2819 0.962 - - - - - - - 0.962 - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
99. TFG ENSGALG00000015299 849 0.962 - - - - - - - - - 0.962 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
100. APAF1 ENSGALG00000011531 3102 0.961 - - - - - - - 0.961 - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA