Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RFTN1

Gene Name Gene ID Reads Annotation
RFTN1 RFTN1 140










Genes with expression patterns similar to RFTN1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RFTN1 RFTN1 140 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CHCHD5 ENSDARG00000091754 35 1.786 0.871 0.915 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
3. si:ch73-7i4.2 ENSDARG00000093998 154 1.714 - 0.907 - - - - 0.807 - - si:ch73-7i4.2 [Source:ZFIN;Acc:ZDB-GENE-060810-137]
4. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1.677 - 0.941 - - - 0.736 - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
5. poc5 ENSDARG00000059982 569 1.657 - 0.940 - - - 0.717 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
6. irx6a ENSDARG00000034420 29 1.632 0.743 0.889 - - - - - - - iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
7. gcfc2 ENSDARG00000079020 479 1.624 0.711 0.913 - - - - - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
8. si:ch211-219a15.3 ENSDARG00000087659 12 1.612 - 0.889 - - - 0.723 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
9. ripply2 ENSDARG00000070535 18 1.567 - 0.844 - - - 0.723 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
10. FNDC3A ENSDARG00000105503 11 1.567 - 0.844 - - - 0.723 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
11. rnf41l ENSDARG00000073918 329 1.554 0.831 0.723 - - - - - - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
12. CABZ01043311.1 CABZ01043311.1 475 1.548 0.741 - - - - - 0.807 - -
13. gtf3c6 ENSDARG00000043301 97 1.479 - 0.765 - - - - 0.714 - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
14. fam69a fam69a 183 1.458 - 0.704 - - - - 0.754 - -
15. alkbh5 ENSDARG00000063003 185 1.458 - 0.709 0.749 - - - - - - alkB homolog 5, RNA demethylase [Source:ZFIN;Acc:ZDB-GENE-061013-602]
16. FAIM2 FAIM2 43 1.426 - - - - - 0.710 - - 0.716
17. lypla1 ENSDARG00000104228 185 0.972 - 0.972 - - - - - - - lysophospholipase I [Source:ZFIN;Acc:ZDB-GENE-050417-87]
18. slc6a1a ENSDARG00000045944 260 0.966 - 0.966 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
19. ZNF337_7 ZNF337_7 198 0.954 - 0.954 - - - - - - -
20. colm colm 36 0.952 - 0.952 - - - - - - -
21. P2RY14 ENSDARG00000103305 41 0.952 - 0.952 - - - - - - - purinergic receptor P2Y14 [Source:HGNC Symbol;Acc:HGNC:16442]
22. CCDC142 ENSDARG00000101377 161 0.943 - 0.943 - - - - - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
23. nots ENSDARG00000099824 9 0.942 - 0.942 - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
24. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.942 - 0.942 - - - - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
25. CABZ01028403.3 CABZ01028403.3 4 0.942 - 0.942 - - - - - - -
26. mknk2a ENSDARG00000011373 230 0.942 - 0.942 - - - - - - - MAP kinase interacting serine/threonine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6099]
27. si:dkey-202n8.1 si:dkey-202n8.1 35 0.942 - 0.942 - - - - - - -
28. dscamb ENSDARG00000028118 82 0.942 - 0.942 - - - - - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
29. zgc:174862 ENSDARG00000077571 201 0.942 - 0.942 - - - - - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
30. zgc:193682 zgc:193682 15 0.942 - 0.942 - - - - - - -
31. pou4f2 ENSDARG00000069737 451 0.942 - 0.942 - - - - - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
32. CABZ01067743.1 CABZ01067743.1 48 0.942 - 0.942 - - - - - - -
33. sc:d0661 sc:d0661 12 0.942 - 0.942 - - - - - - -
34. CABZ01072511.1 CABZ01072511.1 88 0.942 - 0.942 - - - - - - -
35. CABZ01090951.1 CABZ01090951.1 78 0.942 - 0.942 - - - - - - -
36. fgf6b ENSDARG00000045856 136 0.942 - 0.942 - - - - - - - fibroblast growth factor 6b [Source:ZFIN;Acc:ZDB-GENE-050201-5]
37. NHSL1 NHSL1 182 0.942 - 0.942 - - - - - - -
38. foxj1b ENSDARG00000088290 343 0.935 - 0.935 - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
39. CU019646.1 ENSDARG00000117632 223 0.93 - 0.930 - - - - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
40. mtpap ENSDARG00000076155, ENSDARG00000112828 272 0.922 - 0.922 - - - - - - - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
41. irx5a ENSDARG00000034043 1694 0.922 - 0.922 - - - - - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
42. gas6 ENSDARG00000007804 405 0.916 - 0.916 - - - - - - - growth arrest-specific 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7773]
43. EPHB6 ENSDARG00000057729 223 0.915 - 0.915 - - - - - - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
44. CABZ01077218.1 ENSDARG00000089720 8 0.915 - 0.915 - - - - - - -
45. wasb ENSDARG00000026350 139 0.915 - 0.915 - - - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
46. si:dkey-9i5.1 si:dkey-9i5.1 36 0.915 - 0.915 - - - - - - -
47. epdr1 ENSDARG00000045420 132 0.914 - 0.914 - - - - - - - ependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
48. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.914 - 0.914 - - - - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
49. pot1 ENSDARG00000079915 42 0.913 - 0.913 - - - - - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
50. cdkl5 ENSDARG00000015240 68 0.913 - 0.913 - - - - - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
51. si:dkey-57h18.2 33 0.913 - 0.913 - - - - - - - si:dkey-57h18.2, transcript variant X1
52. PDE3B ENSDARG00000062190 372 0.913 - - - - - 0.913 - - - phosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]
53. si:dkeyp-80d11.1 ENSDARG00000101087 91 0.913 - 0.913 - - - - - - - si:dkeyp-80d11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4126]
54. itfg2 ENSDARG00000002174 114 0.912 - 0.912 - - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
55. adarb1b ENSDARG00000003544 31 0.912 - 0.912 - - - - - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
56. trpm1b ENSDARG00000103476 369 0.911 - 0.911 - - - - - - - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
57. tmem67 ENSDARG00000076752 180 0.909 - 0.909 - - - - - - - transmembrane protein 67 [Source:ZFIN;Acc:ZDB-GENE-080716-1]
58. cbr1 ENSDARG00000036587 78 0.907 - 0.907 - - - - - - - carbonyl reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030902-2]
59. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 0.902 - 0.902 - - - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
60. CU467854.2 CU467854.2 298 0.902 0.902 - - - - - - - -
61. pvalb7 ENSDARG00000034705, ENSDARG00000109277 221 0.902 - 0.902 - - - - - - - parvalbumin 7 [Source:ZFIN;Acc:ZDB-GENE-040718-285]
62. pknox1.1_1 ENSDARG00000018765 203 0.902 - 0.902 - - - - - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
63. aox3 aox3 399 0.902 - 0.902 - - - - - - -
64. CABZ01071911.2 CABZ01071911.2 64 0.901 - 0.901 - - - - - - -
65. chek2 ENSDARG00000025820, ENSDARG00000115597 77 0.901 - 0.901 - - - - - - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
66. lhpp ENSDARG00000060196 34 0.9 - 0.900 - - - - - - - phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:ZFIN;Acc:ZDB-GENE-070615-43]
67. mmp23bb ENSDARG00000009825 133 0.9 - 0.900 - - - - - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
68. CR318603.2 ENSDARG00000105536 199 0.898 - 0.898 - - - - - - -
69. CABZ01092943.1 CABZ01092943.1 29 0.898 - 0.898 - - - - - - -
70. zgc:66313 ENSDARG00000030357 45 0.898 - 0.898 - - - - - - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
71. ENSDARG00000095340 ENSDARG00000095340 8 0.898 - 0.898 - - - - - - -
72. AVL9 ENSDARG00000055538 329 0.897 - 0.897 - - - - - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
73. C24H16orf11 C24H16orf11 32 0.896 - 0.896 - - - - - - -
74. sytl5 ENSDARG00000062135 11 0.896 - 0.896 - - - - - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
75. rab40b ENSDARG00000042410, ENSDARG00000110455 121 0.892 - 0.892 - - - - - - - RAB40B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-257]
76. si:dkey-2j6.2 si:dkey-2j6.2 5 0.889 - 0.889 - - - - - - -
77. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 0.889 - 0.889 - - - - - - -
78. si:dkey-222f2.6 si:dkey-222f2.6 1 0.889 - 0.889 - - - - - - -
79. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 0.889 - 0.889 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
80. mcf2lb ENSDARG00000076480 50 0.889 - 0.889 - - - - - - - mcf.2 cell line derived transforming sequence-like b [Source:ZFIN;Acc:ZDB-GENE-081104-416]
81. mrc1b ENSDARG00000038822 73 0.889 - 0.889 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
82. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 0.889 - 0.889 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
83. ADAP2 ENSDARG00000070565 29 0.889 - 0.889 - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
84. UNC13C 119 0.889 - 0.889 - - - - - - - unc-13 homolog C (C. elegans)
85. RBBP6_1 RBBP6_1 1 0.889 - 0.889 - - - - - - -
86. TENM2_1 ENSDARG00000037122 67 0.889 - 0.889 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
87. MUC5B MUC5B 1 0.889 - 0.889 - - - - - - -
88. si:ch211-67f13.8 ENSDARG00000079155 7 0.889 - 0.889 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
89. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 0.889 - 0.889 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
90. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 0.889 - 0.889 - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
91. si:ch211-253p18.2 ENSDARG00000092770 21 0.889 - 0.889 - - - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
92. si:dkey-165i8.5 si:dkey-165i8.5 21 0.889 - 0.889 - - - - - - -
93. zgc:173737 ENSDARG00000058299 6 0.889 - 0.889 - - - - - - - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
94. cacna2d2 cacna2d2 16 0.889 - 0.889 - - - - - - -
95. KSR1 KSR1 8 0.889 - 0.889 - - - - - - -
96. rad9a ENSDARG00000056984, ENSDARG00000115514 152 0.889 - 0.889 - - - - - - - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
97. si:dkey-25i10.3 si:dkey-25i10.3 5 0.889 - 0.889 - - - - - - -
98. BX005364.1 ENSDARG00000092439 1 0.889 - 0.889 - - - - - - -
99. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 0.889 - 0.889 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
100. cyp46a2 cyp46a2 38 0.889 - 0.889 - - - - - - -

There are 675 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA