Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFK

Gene Name Gene ID Reads Annotation
RFK ENSGALG00000033558 1364 riboflavin kinase, transcript variant X3











Genes with expression patterns similar to RFK

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFK ENSGALG00000033558 1364 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 riboflavin kinase, transcript variant X3
2. LXR LXR 2599 1.684 - - 0.920 - - - - 0.764 - -
3. AMBRA1 ENSGALG00000008358 2865 1.673 - - 0.951 - - - 0.722 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
4. CENPO ENSGALG00000016609 1699 1.666 - - 0.961 - - - 0.705 - - - centromere protein O [Source:NCBI gene;Acc:422014]
5. MIB1 ENSGALG00000014974 3583 1.649 - - 0.947 - - - - 0.702 - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
6. DCP1B 1306 1.649 - - 0.938 - - - - 0.711 - - decapping mRNA 1B
7. NCAPD2 ENSGALG00000039448 8658 1.636 - - 0.911 - - - 0.725 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
8. PGS1 ENSGALG00000007181 3187 1.56 - - 0.807 - - 0.753 - - - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
9. PSMD13 ENSGALG00000043684 14720 1.541 - - 0.811 - - - - 0.730 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
10. POGLUT1 ENSGALG00000015480 12290 1.534 - - 0.823 - - - 0.711 - - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
11. SPCS1 ENSGALG00000001655 7718 1.525 - - 0.818 - - - 0.707 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
12. URI1 ENSGALG00000004506 6024 1.506 - - 0.773 - - - 0.733 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
13. STX16 ENSGALG00000007541 6458 1.487 - - 0.732 - - - 0.755 - - - syntaxin 16 [Source:NCBI gene;Acc:419315]
14. URB1 ENSGALG00000015887 5854 1.475 - - 0.769 - - - 0.706 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
15. CDC45 ENSGALG00000001616 8432 1.471 - - 0.764 - - - 0.707 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
16. PSMB2 ENSGALG00000026421 51885 1.461 - - 0.745 - - - 0.716 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
17. TARDBP ENSGALG00000002906 24748 1.434 - - 0.713 - - - 0.721 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
18. UEVLD ENSGALG00000006342 164 0.985 - - 0.985 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
19. ENSGALG00000028964 ENSGALG00000028964 46 0.984 - - 0.984 - - - - - - -
20. FBXL5 ENSGALG00000014510 245 0.984 - - 0.984 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
21. TCTN2 ENSGALG00000023683 3596 0.984 - - 0.984 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
22. SZT2 ENSGALG00000028561 255 0.984 - - 0.984 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
23. ENSGALG00000020103 ENSGALG00000020103 64 0.983 - - 0.983 - - - - - - -
24. CDC14B ENSGALG00000012627 110 0.983 - - 0.983 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
25. OSGIN2 ENSGALG00000042840 83 0.983 - - 0.983 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
26. MRC2 ENSGALG00000000461 48 0.983 - - 0.983 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
27. ITGB4 ENSGALG00000002389 44 0.983 - - 0.983 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
28. IFT81 ENSGALG00000003854 2534 0.983 - - 0.983 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
29. TDRD6 48 0.983 - - 0.983 - - - - - - - tudor domain containing 6
30. RQCD1 RQCD1 110 0.983 - - 0.983 - - - - - - -
31. RPS6KB1 ENSGALG00000005198 169 0.982 - - 0.982 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
32. U4 U4 69 0.982 - - 0.982 - - - - - - -
33. NXPE3 ENSGALG00000015344 111 0.982 - - 0.982 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
34. MED12 ENSGALG00000036322 814 0.982 - - 0.982 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
35. ENSGALG00000004703 ENSGALG00000004703 112 0.982 - - 0.982 - - - - - - -
36. PTDSS2 ENSGALG00000004300 682 0.981 - - 0.981 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
37. F2R ENSGALG00000014983 106 0.981 - - 0.981 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
38. RAD54L2 ENSGALG00000003243 187 0.981 - - 0.981 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
39. BBS5 ENSGALG00000009846 344 0.981 - - 0.981 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
40. RECQL ENSGALG00000013174 1323 0.981 - - 0.981 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
41. AKAP10 ENSGALG00000004679 103 0.981 - - 0.981 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
42. CLEC16A ENSGALG00000007167 66 0.981 - - 0.981 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
43. ITM2B ENSGALG00000016996 1112 0.981 - - 0.981 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
44. TRIM13 ENSGALG00000017011 92 0.981 - - 0.981 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
45. ENSGALG00000002020 ENSGALG00000002020 183 0.981 - - 0.981 - - - - - - -
46. ADK ENSGALG00000005057 199 0.98 - - 0.980 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
47. LRRC71 ENSGALG00000027351 695 0.98 - - 0.980 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
48. SLC3A1 ENSGALG00000009973 608 0.98 - - 0.980 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
49. L3MBTL3 ENSGALG00000034030 113 0.979 - - 0.979 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
50. GDPD4 ENSGALG00000000690 824 0.979 - - 0.979 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
51. LRRC42 ENSGALG00000010743 384 0.979 - - 0.979 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
52. GTF2H2 ENSGALG00000002399 2361 0.979 - - 0.979 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
53. CHAMP1 ENSGALG00000016813 508 0.978 - - 0.978 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
54. DBN1 ENSGALG00000033405 216 0.978 - - 0.978 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
55. PRUNE PRUNE 452 0.978 - - 0.978 - - - - - - -
56. SMARCAD1 ENSGALG00000037339 149 0.978 - - 0.978 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
57. RALGAPA2 240 0.977 - - 0.977 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
58. TMEM242 ENSGALG00000013689 377 0.976 - - 0.976 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
59. ABCC3 ENSGALG00000007522 340 0.976 - - 0.976 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
60. CHGA ENSGALG00000010820 1028 0.976 - - 0.976 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
61. FAM134C 860 0.975 - - 0.975 - - - - - - - family with sequence similarity 134 member C
62. BBX ENSGALG00000015353 1281 0.975 - - 0.975 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
63. AASDHPPT ENSGALG00000027981 1017 0.974 - - 0.974 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
64. ABCE1 ENSGALG00000009961 958 0.974 - - 0.974 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
65. CEP104 ENSGALG00000000978 1130 0.974 - - 0.974 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
66. KCTD3 ENSGALG00000009678 335 0.973 - - 0.973 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
67. WAPAL WAPAL 625 0.972 - - 0.972 - - - - - - -
68. TTPAL ENSGALG00000004244 2734 0.972 - - 0.972 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
69. GFER ENSGALG00000005579 1367 0.971 - - 0.971 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
70. ATP8B4 ENSGALG00000002326 456 0.971 - - 0.971 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
71. MLLT3 ENSGALG00000015078 502 0.97 - - 0.970 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
72. ATF7IP ENSGALG00000011814 1571 0.969 - - 0.969 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
73. C18orf8 C18orf8 1512 0.969 - - 0.969 - - - - - - -
74. SOBP ENSGALG00000043047 147 0.968 - - 0.968 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
75. STXBP6 ENSGALG00000009847 224 0.968 - - 0.968 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
76. ENSGALG00000008689 ENSGALG00000008689 232 0.967 - - 0.967 - - - - - - -
77. TUBA4A ENSGALG00000000433 1367 0.967 - - 0.967 - - - - - - - tubulin alpha 4a
78. AKT3 ENSGALG00000034081 866 0.966 - - 0.966 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
79. PCYT1B 190 0.966 - - 0.966 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
80. NACAD 679 0.966 - - 0.966 - - - - - - - NAC alpha domain containing, transcript variant X1
81. NGF ENSGALG00000002556 122 0.965 - - 0.965 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
82. SNX14 ENSGALG00000015831 2554 0.965 - - 0.965 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
83. MAPRE3 ENSGALG00000031726 191 0.965 - - 0.965 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
84. TUBGCP3 ENSGALG00000016836 332 0.964 - - 0.964 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
85. RRN3 ENSGALG00000041989 3934 0.962 - - 0.962 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
86. WDR92 ENSGALG00000008760 3934 0.958 - - 0.958 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
87. SMOC2 ENSGALG00000011205 340 0.958 - - 0.958 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
88. APTX ENSGALG00000001954 692 0.958 - - 0.958 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
89. SGCE ENSGALG00000009670 3070 0.957 - - 0.957 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
90. SETD1B ENSGALG00000004324 2897 0.957 - - 0.957 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
91. SLC37A3 ENSGALG00000012849 836 0.957 - - 0.957 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
92. CA9 ENSGALG00000021340 1431 0.956 - - 0.956 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
93. ATP10D ENSGALG00000014192 94 0.956 - - 0.956 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
94. STAMBP ENSGALG00000042555 1362 0.956 - - 0.956 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
95. MRPS33 ENSGALG00000028879 17966 0.955 - - 0.955 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
96. GTF2E1 ENSGALG00000042320 7712 0.955 - - 0.955 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
97. BAG5 ENSGALG00000031062 4498 0.955 - - 0.955 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
98. PCDH17 ENSGALG00000016941 1006 0.954 - - 0.954 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
99. GGT7 ENSGALG00000001062 476 0.954 - - 0.954 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
100. MED15 ENSGALG00000006430 814 0.954 - - 0.954 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]

There are 509 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA