Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFFL

Gene Name Gene ID Reads Annotation
RFFL ENSGALG00000002225 928 ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]











Genes with expression patterns similar to RFFL

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFFL ENSGALG00000002225 928 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
2. NNT ENSGALG00000014869 8496 2.289 - - - - - - 0.873 - 0.710 0.706 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
3. FDFT1 ENSGALG00000016665 3053 1.889 - - - - - - 0.961 - 0.928 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
4. SRA1 ENSGALG00000040453 266 1.812 - - - - - - 0.976 - - 0.836 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
5. TTI1 ENSGALG00000006791 1218 1.81 - - - - - - 0.973 - - 0.837 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
6. GNMT ENSGALG00000043290 3288 1.805 - - - - - - 0.904 - 0.901 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
7. DTX2 ENSGALG00000001905 1475 1.804 - - - - - - 0.977 - - 0.827 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
8. RAD17 ENSGALG00000015571 1374 1.803 - - - - - - 0.916 - 0.887 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
9. IWS1 ENSGALG00000001803 2305 1.776 - - - - - - 0.983 - - 0.793 IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
10. SLC25A48 ENSGALG00000006341 2606 1.767 - - - - - - 0.955 - 0.812 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
11. MITF ENSGALG00000039583 865 1.754 - - - - - - 0.953 - - 0.801 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
12. ELL2 ENSGALG00000014678 1111 1.685 - - - - - - - - 0.896 0.789 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
13. LRR1 ENSGALG00000012230 1062 1.683 - - - - - - 0.969 - 0.714 - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
14. LONP2 ENSGALG00000003942 3380 1.663 - - - - - - 0.864 - 0.799 - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
15. TRIM3 ENSGALG00000034004 110 1.65 - - - - - - - - 0.793 0.857 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
16. MDN1 ENSGALG00000015733 2352 1.64 - - - - - - - - 0.907 0.733 midasin AAA ATPase 1, transcript variant X1
17. TMEM38B ENSGALG00000027472 2465 1.628 - - - - - - 0.847 - 0.781 - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
18. MED17 ENSGALG00000017218 5821 1.616 - - - - - - - - 0.865 0.751 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
19. BZFP1 ENSGALG00000027546 632 1.61 - - - - - - - - 0.810 0.800 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
20. ATL1 ENSGALG00000012339 3789 1.606 - - - - - - 0.887 - - 0.719 atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
21. GARNL3 ENSGALG00000000847 3423 1.584 - - - - - - 0.870 - - 0.714 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
22. OGFOD3 ENSGALG00000001618 2438 1.568 - - - - - - - - 0.806 0.762 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
23. NBN ENSGALG00000037686 648 1.563 - - - - - - - - 0.751 0.812 nibrin [Source:NCBI gene;Acc:374246]
24. WWC1 ENSGALG00000001826 4666 1.559 - - - - - - 0.778 - - 0.781 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
25. RUFY1 ENSGALG00000029706 4473 1.555 - - - - - - 0.849 - 0.706 - RUN and FYVE domain containing 1 [Source:NCBI gene;Acc:426519]
26. CALCOCO2 ENSGALG00000001525 3121 1.549 - - - - - - 0.838 - - 0.711 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
27. GHITM ENSGALG00000021262 7159 1.531 - - - - - - 0.806 - 0.725 - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
28. PDCD2L 4843 1.517 - - - - - - 0.735 - - 0.782 programmed cell death 2-like
29. YIPF4 ENSGALG00000010547 4337 1.505 - - - - - - 0.770 - 0.735 - Yip1 domain family member 4 [Source:NCBI gene;Acc:421464]
30. EXOSC8 ENSGALG00000017048 2939 1.498 - - - - - - 0.704 - 0.794 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
31. YIPF6 ENSGALG00000035973 3333 1.48 - - - - - - - - 0.720 0.760 Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
32. TATDN1 ENSGALG00000041072 1585 1.472 - - - - - - - - 0.747 0.725 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
33. PIGL ENSGALG00000004492 669 0.982 - - - - - - 0.982 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
34. PTDSS2 ENSGALG00000004300 682 0.98 - - - - - - 0.980 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
35. PIGF ENSGALG00000020057 201 0.979 - - - - - - 0.979 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
36. CLK3 ENSGALG00000001362 2171 0.978 - - - - - - 0.978 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
37. FXYD6 ENSGALG00000025937 4073 0.978 - - - - - - 0.978 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
38. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.978 - - - - - - 0.978 - - - pseudouridylate synthase-like 1, transcript variant X8
39. TP53BP1 ENSGALG00000042201 708 0.977 - - - - - - 0.977 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
40. C7orf55 C7orf55 7083 0.977 - - - - - - 0.977 - - -
41. MRM1 ENSGALG00000039523 2009 0.977 - - - - - - 0.977 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
42. C11H19ORF12 C11H19ORF12 5149 0.976 - - - - - - 0.976 - - -
43. TUFT1 ENSGALG00000032955 1317 0.976 - - - - - - 0.976 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
44. KLF11 ENSGALG00000016440 65 0.976 - - - - - - 0.976 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
45. LPXN 133 0.975 - - - - - - 0.975 - - - leupaxin, transcript variant X4
46. BCAR3 358 0.975 - - - - - - 0.975 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
47. BBS4 ENSGALG00000001798 667 0.973 - - - - - - 0.973 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
48. C7orf63 C7orf63 147 0.972 - - - - - - 0.972 - - -
49. SLC28A3 ENSGALG00000012593 131 0.972 - - - - - - 0.972 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
50. ANGPTL2 ENSGALG00000000927 2580 0.971 - - - - - - 0.971 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
51. YWHAQ ENSGALG00000016433 3450 0.971 - - - - - - 0.971 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
52. TNFRSF11B ENSGALG00000043167 911 0.971 - - - - - - 0.971 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
53. ARHGEF3 ENSGALG00000005481 683 0.97 - - - - - - 0.970 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
54. ASTN2 ENSGALG00000007038 1748 0.97 - - - - - - 0.970 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
55. MYH15 ENSGALG00000015358 6304 0.968 - - - - - - 0.968 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
56. SDK1 ENSGALG00000004420 571 0.968 - - - - - - 0.968 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
57. COL22A1 ENSGALG00000038022 544 0.967 - - - - - - 0.967 - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
58. GADD45 GADD45 8780 0.967 - - - - - - 0.967 - - -
59. C9orf85 ENSGALG00000026001 4110 0.966 - - - - - - 0.966 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
60. CLASP1 ENSGALG00000011645 1378 0.965 - - - - - - 0.965 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
61. OSBPL8 ENSGALG00000010246 4565 0.965 - - - - - - 0.965 - - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
62. EFNB1 ENSGALG00000036539 2706 0.965 - - - - - - 0.965 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
63. PRDM10 632 0.964 - - - - - - 0.964 - - - PR domain 10, transcript variant X10
64. WHSC1 1712 0.963 - - - - - - 0.963 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
65. C12orf66 ENSGALG00000027682 2110 0.959 - - - - - - 0.959 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
66. ZNF830 ENSGALG00000013156 3896 0.959 - - - - - - 0.959 - - - zinc finger protein 830
67. HYAL1 ENSGALG00000000785 1778 0.958 - - - - - - 0.958 - - - hyaluronoglucosaminidase 1, transcript variant X3
68. BTBD7 4136 0.956 - - - - - - 0.956 - - - BTB domain containing 7, transcript variant X2
69. EML1 1941 0.955 - - - - - - 0.955 - - - echinoderm microtubule associated protein like 1, transcript variant X11
70. THOC3 ENSGALG00000024172 7617 0.954 - - - - - - 0.954 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
71. ESCO1 ENSGALG00000014936 739 0.952 - - - - - - 0.952 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
72. OSBPL1A ENSGALG00000015086 2702 0.951 - - - - - - 0.951 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
73. COL17A1 ENSGALG00000029617 167 0.951 - - - - - - 0.951 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
74. TIRAP ENSGALG00000040224 2578 0.95 - - - - - - 0.950 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
75. NUDCD1 ENSGALG00000040879 2965 0.948 - - - - - - 0.948 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
76. CRELD2 ENSGALG00000008551 2084 0.947 - - - - - - 0.947 - - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
77. ARL6IP4 ENSGALG00000003682 2467 0.947 - - - - - - 0.947 - - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
78. NRCAM ENSGALG00000009514 490 0.946 - - - - - - 0.946 - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
79. ABHD13 ENSGALG00000016853 4975 0.946 - - - - - - 0.946 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
80. LMO4 ENSGALG00000006252 3686 0.944 - - - - - - 0.944 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
81. LMX1A ENSGALG00000003424 335 0.944 - - - - - - 0.944 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
82. AP1S3 ENSGALG00000005171 2981 0.944 - - - - - - 0.944 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
83. ALMS1 ENSGALG00000044620 570 0.943 - - - - - - - - 0.943 - ALMS1, centrosome and basal body associated protein, transcript variant X1
84. QRICH1 ENSGALG00000006867 2031 0.942 - - - - - - 0.942 - - - glutamine rich 1 [Source:NCBI gene;Acc:100858758]
85. SUMF1 ENSGALG00000008286 941 0.941 - - - - - - 0.941 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
86. ZBTB26 ENSGALG00000042762 1920 0.94 - - - - - - 0.940 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
87. PCLO 249 0.939 - - - - - - - - 0.939 - piccolo presynaptic cytomatrix protein
88. APCDD1 ENSGALG00000000894 1482 0.939 - - - - - - 0.939 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
89. FAM120B ENSGALG00000011180 101 0.939 - - - - - - - - 0.939 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
90. CLN6 ENSGALG00000007981 5656 0.938 - - - - - - 0.938 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
91. AP1AR ENSGALG00000028807 2398 0.937 - - - - - - 0.937 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
92. ACTR10 ENSGALG00000012041 2752 0.936 - - - - - - 0.936 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
93. DDX42 ENSGALG00000000581 8780 0.936 - - - - - - 0.936 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
94. ANXA11 ENSGALG00000043826 5189 0.935 - - - - - - 0.935 - - - annexin A11 [Source:NCBI gene;Acc:423637]
95. BSDC1 ENSGALG00000003405 3701 0.935 - - - - - - 0.935 - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
96. NAPEPLD ENSGALG00000008285 1295 0.934 - - - - - - 0.934 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
97. LHCGR ENSGALG00000009095 174 0.933 - - - - - - - - 0.933 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
98. CCDC137 ENSGALG00000004505 2205 0.933 - - - - - - 0.933 - - - coiled-coil domain containing 137 [Source:HGNC Symbol;Acc:HGNC:33451]
99. BEND5 ENSGALG00000010505 3298 0.933 - - - - - - 0.933 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
100. ZER1 ENSGALG00000004659 1635 0.931 - - - - - - 0.931 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]

There are 753 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA