Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFFL

Gene Name Gene ID Reads Annotation
RFFL ENSDARG00000042833 73 ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]










Genes with expression patterns similar to RFFL

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RFFL ENSDARG00000042833 73 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]
2. ttc12 ENSDARG00000056896 97 1.82 - - 0.876 0.944 - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
3. rap2ab ENSDARG00000040246 63 1.784 1.000 0.784 - - - - - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
4. ddx43 ENSDARG00000022614 48 1.766 0.871 - 0.895 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
5. ubxn10 ENSDARG00000052535 24 1.724 0.746 - - 0.978 - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
6. gdf10b ENSDARG00000073891 116 1.682 - - 0.737 0.945 - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
7. si:dkey-17e16.18 47 1.679 - - 0.888 0.791 - - - - - si:dkey-17e16.18
8. efcab2 ENSDARG00000074323 88 1.658 - - 0.717 0.941 - - - - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
9. BX469922.1 BX469922.1 133 1.651 - - 0.873 0.778 - - - - -
10. CR847543.1 ENSDARG00000086708 155 1.642 0.746 0.896 - - - - - - -
11. cdc14aa ENSDARG00000013858 18 1.632 0.746 - 0.886 - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
12. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 1.626 - - - 0.921 - - - - 0.705
13. wfikkn2b ENSDARG00000059139 45 1.618 - 0.735 0.883 - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
14. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1.605 0.746 - 0.859 - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
15. gfod2 ENSDARG00000061145 263 1.586 - 0.784 - 0.802 - - - - - glucose-fructose oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-64]
16. MANBAL ENSDARG00000059853 636 1.579 - 0.796 - - - - 0.783 - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
17. asic2 ENSDARG00000006849 18 1.577 0.746 - - - - 0.831 - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
18. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1.563 - 0.848 - - - - 0.715 - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
19. slc6a6b ENSDARG00000098438 7 1.56 0.746 - - - - 0.814 - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
20. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.529 - 0.796 - - - - - - 0.733 poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
21. SNX19 SNX19 350 1.524 - - - 0.780 - - 0.744 - -
22. zgc:174700_1 zgc:174700_1 60 1.514 0.746 - 0.768 - - - - - -
23. ABTB1 ENSDARG00000063354 383 1.514 - - - 0.804 - - 0.710 - - ankyrin repeat and BTB (POZ) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-141212-241]
24. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 1.487 - - 0.728 0.759 - - - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
25. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.485 0.746 - - 0.739 - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
26. mettl21a ENSDARG00000012051 86 1.475 0.746 - - - - 0.729 - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
27. si:dkey-217m5.3 si:dkey-217m5.3 22 1.461 0.746 - - - - - 0.715 - -
28. CPNE7 ENSDARG00000102584 95 1 1.000 - - - - - - - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
29. TMEM74B ENSDARG00000078868 45 1 1.000 - - - - - - - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
30. si:ch211-255g12.5 si:ch211-255g12.5 7 1 1.000 - - - - - - - -
31. prkcha ENSDARG00000018382 43 1 1.000 - - - - - - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
32. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 1.000 - - - - - - - -
33. BX511189.1 BX511189.1 34 1 1.000 - - - - - - - -
34. pip5k1ba ENSDARG00000044295 57 1 - - - - - - 1.000 - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-041010-81]
35. ANKRD34A 22 1 1.000 - - - - - - - - ankyrin repeat domain 34A, transcript variant X2
36. zgc:174877 ENSDARG00000079278 143 1 1.000 - - - - - - - - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
37. CU929328.1 ENSDARG00000105332 31 1 1.000 - - - - - - - -
38. f2rl1.1 ENSDARG00000068856 47 1 - - - - - 1.000 - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
39. oaz2b ENSDARG00000059815 38 1 1.000 - - - - - - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
40. hoxa1a ENSDARG00000104307 29 1 1.000 - - - - - - - - homeobox A1a [Source:ZFIN;Acc:ZDB-GENE-000823-5]
41. chico ENSDARG00000019588 77 1 1.000 - - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
42. dlgap3 ENSDARG00000055459 85 1 1.000 - - - - - - - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
43. zgc:112038 ENSDARG00000046140 73 1 1.000 - - - - - - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
44. mgat4a ENSDARG00000063330 3 1 1.000 - - - - - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
45. AL954372.1_1 ENSDARG00000112499 57 1 1.000 - - - - - - - -
46. si:ch211-214p16.2 ENSDARG00000094975 59 0.971 - 0.971 - - - - - - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
47. emilin3a ENSDARG00000078052 1652 0.953 - - - 0.953 - - - - - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
48. c1qa ENSDARG00000044613, ENSDARG00000109639 35 0.951 0.951 - - - - - - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
49. cpeb1a ENSDARG00000045932 81 0.951 0.951 - - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
50. CCDC135 ENSDARG00000100231 48 0.949 - - - 0.949 - - - - - coiled-coil domain containing 135 [Source:ZFIN;Acc:ZDB-GENE-120406-10]
51. wisp1a ENSDARG00000054331 26 0.949 - - - 0.949 - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
52. eve1 ENSDARG00000056012 144 0.948 - - - 0.948 - - - - - even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
53. si:dkey-189h5.6 ENSDARG00000095188 50 0.948 - - - 0.948 - - - - - si:dkey-189h5.6 [Source:ZFIN;Acc:ZDB-GENE-060526-230]
54. trim35-29 ENSDARG00000055730 24 0.948 - - - 0.948 - - - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
55. il1b ENSDARG00000098700 27 0.948 - - - 0.948 - - - - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
56. camk4 ENSDARG00000005372 118 0.945 - - - 0.945 - - - - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
57. si:ch211-253p18.2 ENSDARG00000092770 21 0.945 - - - 0.945 - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
58. dnaaf1 ENSDARG00000012030 58 0.945 - - - 0.945 - - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
59. gdf6b ENSDARG00000005510 106 0.944 - - - 0.944 - - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
60. si:ch211-113a14.15_2 37 0.943 - - - 0.943 - - - - - si:ch211-113a14.15
61. snx24 ENSDARG00000053527 31 0.941 0.941 - - - - - - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
62. fndc1 ENSDARG00000002847 178 0.941 0.941 - - - - - - - - fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
63. AL840631.3 AL840631.3 82 0.941 0.941 - - - - - - - -
64. pycrl pycrl 80 0.941 0.941 - - - - - - - -
65. ccdc113 ENSDARG00000006981 67 0.936 - - - 0.936 - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
66. lzts2b ENSDARG00000077207 22 0.936 - - - 0.936 - - - - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
67. CCDC23 CCDC23 54 0.935 - - 0.935 - - - - - -
68. slc35d1b ENSDARG00000027986 138 0.935 - - - - - - 0.935 - - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1b [Source:ZFIN;Acc:ZDB-GENE-040426-1213]
69. efhc2 ENSDARG00000004204 59 0.935 - - - 0.935 - - - - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
70. CCDC176_1 CCDC176_1 126 0.935 - - - 0.935 - - - - -
71. c1qtnf5 ENSDARG00000056134 729 0.934 - - - 0.934 - - - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
72. serpinb1l2 ENSDARG00000070396 37 0.934 - - - 0.934 - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
73. cbx8a_1 ENSDARG00000087327 109 0.934 - - - 0.934 - - - - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
74. si:dkey-97l20.5 si:dkey-97l20.5 33 0.933 - - - 0.933 - - - - -
75. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 0.933 - - - 0.933 - - - - - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
76. si:ch211-22k7.1 si:ch211-22k7.1 30 0.931 - 0.931 - - - - - - -
77. ppm1lb ENSDARG00000089641 26 0.93 - - - 0.930 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Lb [Source:ZFIN;Acc:ZDB-GENE-060929-136]
78. klhl42 ENSDARG00000006011 46 0.929 - - - 0.929 - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
79. si:dkey-176f19.1 ENSDARG00000101463 27 0.929 - - 0.929 - - - - - - si:dkey-176f19.1 [Source:ZFIN;Acc:ZDB-GENE-110914-124]
80. fbln5 ENSDARG00000039273 105 0.929 - - - 0.929 - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
81. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.929 - - - 0.929 - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
82. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 0.927 - - - 0.927 - - - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
83. poc5 ENSDARG00000059982 569 0.927 - - - 0.927 - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
84. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.927 - - - 0.927 - - - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
85. angptl6 ENSDARG00000020265 273 0.926 - - - 0.926 - - - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
86. socs3a ENSDARG00000025428 349 0.926 - - - 0.926 - - - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
87. PKHD1L1 ENSDARG00000091116 39 0.925 - - - 0.925 - - - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
88. illr4 ENSDARG00000008075 164 0.924 - - - 0.924 - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
89. hoxc13b ENSDARG00000113877 549 0.923 - - - 0.923 - - - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
90. cog5 ENSDARG00000008235 222 0.923 - - - 0.923 - - - - - component of oligomeric golgi complex 5 [Source:ZFIN;Acc:ZDB-GENE-041210-47]
91. gtf3c6 ENSDARG00000043301 97 0.921 - - - 0.921 - - - - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
92. PEG3_15 PEG3_15 113 0.92 - - - 0.920 - - - - -
93. zgc:194469 ENSDARG00000104367 93 0.918 - - - 0.918 - - - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
94. cygb1 ENSDARG00000099371 63 0.917 - - - 0.917 - - - - - cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
95. macrod1 ENSDARG00000029609 66 0.916 - - - 0.916 - - - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
96. stk19 ENSDARG00000086628 85 0.915 - - - 0.915 - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
97. erfl3 ENSDARG00000062801 149 0.915 - - - 0.915 - - - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
98. CABZ01012857.1 CABZ01012857.1 78 0.914 - - - 0.914 - - - - -
99. ankk1 ENSDARG00000056921 119 0.913 - - - 0.913 - - - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
100. tsku ENSDARG00000040815 631 0.913 - - - 0.913 - - - - - tsukushi small leucine rich proteoglycan homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-4683]

There are 767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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