Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFESD

Gene Name Gene ID Reads Annotation
RFESD ENSGALG00000014673 198 Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]











Genes with expression patterns similar to RFESD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFESD ENSGALG00000014673 198 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 - 1.000 Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
2. TCF20 ENSGALG00000011878 69 1.54 - - 0.737 - - - - - - 0.803 transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
3. CLP1 ENSGALG00000007370 2047 1.525 - - - 0.770 - - - - - 0.755 cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
4. DNAJC11 ENSGALG00000000627 769 1.436 - - - 0.731 - - - - - 0.705 DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
5. PANX3 ENSGALG00000021443 431 1.424 - - - 0.703 - - - - - 0.721 pannexin 3 [Source:HGNC Symbol;Acc:HGNC:20573]
6. CP ENSGALG00000030773 119 0.974 - - - 0.974 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
7. ZPBP2 ENSGALG00000013484 14 0.973 - - - 0.973 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
8. HTR1E ENSGALG00000015826 11 0.973 - - - 0.973 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
9. NUP160 ENSGALG00000043074 46 0.973 - - - 0.973 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
10. ZDHHC8 ENSGALG00000002124 35 0.97 - - - 0.970 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
11. MTERFD3 MTERFD3 20 0.969 - - - 0.969 - - - - - -
12. TRAF2 ENSGALG00000042838 24 0.967 - - - 0.967 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
13. BEGAIN ENSGALG00000011236 35 0.967 - - - 0.967 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
14. VEPH1 ENSGALG00000009682 51 0.965 - - - 0.965 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
15. ACOX2 ENSGALG00000007132 47 0.963 - - - 0.963 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
16. OXGR1 ENSGALG00000016891 13 0.961 - - - 0.961 - - - - - - oxoglutarate receptor 1
17. RGS16 ENSGALG00000033535 139 0.96 - - - 0.960 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
18. ENSGALG00000028652 ENSGALG00000028652 65 0.958 - - - 0.958 - - - - - -
19. KITLG ENSGALG00000011206 71 0.951 - - - 0.951 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
20. gga-mir-454 ENSGALG00000033526 22 0.947 - - - 0.947 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
21. SMCR8 ENSGALG00000024082 44 0.942 - - - 0.942 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
22. OTUD7B ENSGALG00000013348 38 0.939 - - - 0.939 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
23. S1PR1 ENSGALG00000005208 12 0.932 - - - - - - - - - 0.932 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
24. ARHGEF5 ENSGALG00000017276 32 0.929 - - - 0.929 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
25. MATN2 44 0.926 - - - 0.926 - - - - - - matrilin 2, transcript variant X9
26. CCP110 ENSGALG00000006925 59 0.921 - - - - - - - - - 0.921 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
27. PAG1 ENSGALG00000034188 9 0.92 - - - - - - - - - 0.920 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
28. TPCN2 ENSGALG00000007550 10 0.92 - - - - - - - - - 0.920 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
29. LANCL3 ENSGALG00000016265 9 0.918 - - - - - - - - - 0.918 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
30. RAD54L2 ENSGALG00000003243 187 0.917 - - - - - - - - - 0.917 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
31. HERPUD1 ENSGALG00000001220 18 0.915 - - - - - - - - - 0.915 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
32. LPGAT1 ENSGALG00000009848 33 0.914 - - - - - - - - - 0.914 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
33. SIAT7E SIAT7E 13 0.913 - - - - - - - - - 0.913
34. FANCA ENSGALG00000000516 250 0.913 - - - - - - - - - 0.913 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
35. TNFAIP2 ENSGALG00000011446 32 0.913 - - - 0.913 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
36. CYP4A22 ENSGALG00000020688 741 0.913 - - - 0.913 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
37. OGDHL ENSGALG00000002266 57 0.912 - - - 0.912 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
38. LONRF2 ENSGALG00000016768 193 0.912 - - - - - - - - - 0.912 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
39. EHD4 ENSGALG00000008950 22 0.912 - - - - - - - - - 0.912 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
40. ETNPPL ENSGALG00000034741 39 0.912 - - - - - - - - - 0.912 ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
41. SCL SCL 69 0.911 - - - - - - - - - 0.911
42. CSRP3 ENSGALG00000004044 456 0.911 - - - - - - - - - 0.911 cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
43. PLEKHA1 ENSGALG00000034548 34 0.91 - - - - - - - - - 0.910 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
44. GAA ENSGALG00000038853 158 0.91 - - - - - - - - - 0.910 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
45. NLGN4 NLGN4 283 0.908 - - - 0.908 - - - - - -
46. SMG7 ENSGALG00000004667 707 0.907 - - - 0.907 - - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
47. FER1L6 ENSGALG00000033783 196 0.906 - - - - - - - - - 0.906 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
48. WDR63 ENSGALG00000008696 15 0.905 - - - - - - - - - 0.905 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
49. AKAP10 ENSGALG00000004679 103 0.903 - - - - - - - - - 0.903 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
50. XYLT1 ENSGALG00000006757 169 0.902 - - - - - - - - - 0.902 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
51. ENSGALG00000024035 ENSGALG00000024035 544 0.901 - - - 0.901 - - - - - -
52. PLCG2 ENSGALG00000033507 348 0.901 - - - - - - - - - 0.901 phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
53. MRVI1 ENSGALG00000005632 450 0.901 - - - - - - - - - 0.901 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
54. SLITRK4 ENSGALG00000007242 165 0.898 - - - - - - - - - 0.898 SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
55. CSMD3 ENSGALG00000031578 23 0.896 - - - - - - - - - 0.896 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
56. SP2 ENSGALG00000000233 43 0.896 - - - - - - - - - 0.896 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
57. NOTCH1 ENSGALG00000002375 726 0.895 - - - 0.895 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
58. ATP6AP2 ENSGALG00000016241 257 0.893 - - - - - - - - - 0.893 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
59. FAM161A ENSGALG00000008810 36 0.893 - - - - - - - - - 0.893 FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
60. FAM160A2 ENSGALG00000003416 23 0.893 - - - - - - - - - 0.893 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
61. NEK3 ENSGALG00000017024 696 0.893 - - - - - - - - - 0.893 NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
62. ENSGALG00000025733 ENSGALG00000025733 197 0.892 - - - 0.892 - - - - - -
63. ZNF143 ENSGALG00000005787 345 0.891 - - - 0.891 - - - - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
64. GOPC ENSGALG00000014902 352 0.889 - - - 0.889 - - - - - - golgi associated PDZ and coiled-coil motif containing, transcript variant X2
65. RFX3 ENSGALG00000010179 305 0.888 - - - - - - - - - 0.888 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
66. CLEC3B ENSGALG00000030969 363 0.887 - - - 0.887 - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
67. TMEM177 ENSGALG00000011593 311 0.886 - - - 0.886 - - - - - - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
68. PRTFDC1 ENSGALG00000007694 111 0.886 - - - - - - - - - 0.886 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
69. TMEM69 ENSGALG00000010279 716 0.881 - - - 0.881 - - - - - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
70. UBAC1 ENSGALG00000042564 598 0.879 - - - - - - - - - 0.879 UBA domain containing 1 [Source:NCBI gene;Acc:427754]
71. TXLNG ENSGALG00000016547 503 0.879 - - - 0.879 - - - - - - taxilin gamma [Source:HGNC Symbol;Acc:HGNC:18578]
72. RACGAP1L ENSGALG00000011252 664 0.879 - - - - - - - - - 0.879 rac GTPase-activating protein 1-like
73. IFT172 ENSGALG00000016509 1226 0.878 - - - - - - - - - 0.878 intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
74. PIK3R3 ENSGALG00000010335 374 0.877 - - - - - - - - - 0.877 phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
75. PIGV ENSGALG00000039883 32 0.876 - - - - - - - - - 0.876 phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
76. APBA1 ENSGALG00000015111 261 0.876 - - - - - - - - - 0.876 amyloid beta precursor protein binding family A member 1 [Source:HGNC Symbol;Acc:HGNC:578]
77. KCTD17 ENSGALG00000042419 90 0.872 - - - 0.872 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
78. JAG1 ENSGALG00000009020 25 0.871 - - - - - - - - - 0.871 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
79. ACSF3 ENSGALG00000035225 261 0.87 - - - - - - - - - 0.870 acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
80. EPC1 ENSGALG00000007169 101 0.869 - - - - - - - - - 0.869 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
81. NUAK1 ENSGALG00000012662 411 0.869 - - - 0.869 - - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
82. LGALSL ENSGALG00000027096 390 0.868 - - - 0.868 - - - - - - galectin like [Source:NCBI gene;Acc:421278]
83. ENSGALG00000009344 ENSGALG00000009344 330 0.867 - - - - - - - - - 0.867
84. PRODH ENSGALG00000007728 1659 0.867 - - - - - - - - - 0.867 proline dehydrogenase 1
85. FBXL17 ENSGALG00000000276 2443 0.865 - - - 0.865 - - - - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
86. IPMK ENSGALG00000002710 40 0.865 - - - - - - - - - 0.865 inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
87. DNAAF1 ENSGALG00000003258 115 0.865 - - - - - - - - - 0.865 dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
88. CSGALNACT2 ENSGALG00000002543 138 0.864 - - - - - - - - - 0.864 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:24292]
89. ENSGALG00000021439 ENSGALG00000021439 628 0.864 - - - - - - - - - 0.864
90. RASA4 ENSGALG00000001876 178 0.863 - - - - - - - - - 0.863 RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
91. DMRT1 ENSGALG00000010160 425 0.861 - - - 0.861 - - - - - - doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
92. RNF126 ENSGALG00000042948 4724 0.861 - - - - - - - - - 0.861 ring finger protein 126 [Source:NCBI gene;Acc:420085]
93. VPS13B 2293 0.861 - - - - - - - - - 0.861 vacuolar protein sorting 13 homolog B
94. GUCY2C ENSGALG00000011838 16 0.861 - - - - - - - 0.861 - - guanylate cyclase 2C [Source:HGNC Symbol;Acc:HGNC:4688]
95. PYURF ENSGALG00000039869 5657 0.86 - - - 0.860 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
96. TAOK1 ENSGALG00000004082 77 0.86 - - - 0.860 - - - - - - TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]
97. PTPN9 ENSGALG00000001664 2309 0.858 - - - 0.858 - - - - - - protein tyrosine phosphatase, non-receptor type 9 [Source:NCBI gene;Acc:415308]
98. POLR3B ENSGALG00000012655 704 0.858 - - - - - - - - - 0.858 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
99. HVCN1 ENSGALG00000004562 2550 0.858 - - - - - - - - - 0.858 hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
100. ZNF839 ENSGALG00000011368 148 0.858 - - - - - - - - - 0.858 zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]

There are 320 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA