Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RFC5

Gene Name Gene ID Reads Annotation
RFC5 ENSGALG00000026517 26113 replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]











Genes with expression patterns similar to RFC5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFC5 ENSGALG00000026517 26113 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
2. GOT1 ENSGALG00000007484 21664 1.725 - - - - - - 0.829 0.896 - - glutamic-oxaloacetic transaminase 1 [Source:NCBI gene;Acc:396261]
3. NCDN ENSGALG00000002408 6180 1.669 - - - - - - 0.762 0.907 - - neurochondrin [Source:NCBI gene;Acc:419633]
4. SMN ENSGALG00000002430 7515 1.669 - - - - 0.776 - - 0.893 - - survival of motor neuron [Source:NCBI gene;Acc:374025]
5. CLIC4 ENSGALG00000001262 11497 1.662 - - - - - - 0.825 0.837 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
6. RANGAP1 ENSGALG00000011966 20170 1.631 - - - - - - 0.795 0.836 - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
7. SIVA1 ENSGALG00000011619 15130 1.625 - - - - - - 0.796 0.829 - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
8. VBP1 VBP1 14482 1.614 - - - - - - 0.899 0.715 - -
9. PAXBP1 ENSGALG00000036833 5573 1.589 - - - - 0.715 - - 0.874 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
10. SLC35F6 ENSGALG00000016589 5172 1.587 - - - - - - 0.731 0.856 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
11. TMEM55A 2902 1.583 - - - - - - 0.742 0.841 - - transmembrane protein 55A
12. PTGR1 ENSGALG00000015702 3667 1.567 - - - - 0.739 - 0.828 - - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
13. IBA57 ENSGALG00000005328 4362 1.558 - - - - - - 0.729 0.829 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
14. EFR3A ENSGALG00000039533 3826 1.542 - - - - - - 0.736 0.806 - - EFR3 homolog A [Source:HGNC Symbol;Acc:HGNC:28970]
15. ALYREF ENSGALG00000007237 48479 1.54 - - - - 0.786 - - - 0.754 - Aly/REF export factor [Source:NCBI gene;Acc:769169]
16. MAN1A1 ENSGALG00000014878 1061 1.533 - - - - - - 0.720 0.813 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
17. SKAP2 ENSGALG00000030081 13746 1.531 - - - - 0.728 - 0.803 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
18. MRPL55 5995 1.528 - - - - 0.746 - 0.782 - - - mitochondrial ribosomal protein L55
19. PPP1CC ENSGALG00000004571 14748 1.527 - - - - 0.820 - 0.707 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
20. CIR1 ENSGALG00000014276 7189 1.526 - - - - - - 0.728 0.798 - - corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
21. RIOK3 ENSGALG00000015004 4249 1.526 - - - - 0.714 - 0.812 - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
22. SAFB2 ENSGALG00000001948 10238 1.518 - - - - 0.704 - 0.814 - - - scaffold attachment factor B2, transcript variant X6
23. WASF1 ENSGALG00000015066 5628 1.516 - - - - 0.770 - 0.746 - - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
24. UQCRC1 ENSGALG00000005789 23201 1.516 - - - - 0.705 - 0.811 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
25. MRPL47 ENSGALG00000013759 9044 1.515 - - - - 0.744 - 0.771 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
26. SNRPD1 ENSGALG00000041334 219195 1.502 - - - - 0.782 - - - 0.720 - small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
27. PCNP ENSGALG00000015330 15750 1.495 - - - - 0.782 - 0.713 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
28. GNG12 ENSGALG00000026591 5817 1.48 - - - - 0.705 - 0.775 - - - G protein subunit gamma 12, transcript variant X21
29. PDIA5 ENSGALG00000011689 6913 1.477 - - - - 0.750 - 0.727 - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
30. THAP5 ENSGALG00000009494 6540 1.467 - - - - 0.741 - 0.726 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
31. CBLL1 ENSGALG00000038981 6725 1.466 - - - - 0.746 - 0.720 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
32. ARID3B ENSGALG00000001376 4290 1.424 - - - - - 0.710 0.714 - - - AT-rich interaction domain 3B [Source:NCBI gene;Acc:100859297]
33. ERLEC1 ENSGALG00000008172 3948 1.424 - - - - 0.711 - 0.713 - - - endoplasmic reticulum lectin 1 [Source:HGNC Symbol;Acc:HGNC:25222]
34. PI4KA ENSGALG00000040756 3973 1.423 - - - - 0.713 - 0.710 - - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
35. ILF2 ENSGALG00000011570 23050 0.912 - - - - - - 0.912 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
36. AN1ZNF5L ENSGALG00000014589 21148 0.901 - - - - - - 0.901 - - - AN1-type zinc finger protein 5-like, transcript variant X2
37. NKRF ENSGALG00000008645 3531 0.895 - - - - - - - 0.895 - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
38. RBP5 ENSGALG00000014662 31268 0.891 - - - - - - 0.891 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
39. PSMC3 ENSGALG00000008108 22922 0.886 - - - - - - 0.886 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
40. RBBP4 ENSGALG00000003522 72455 0.885 - - - - - - 0.885 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
41. NDUFAB1 ENSGALG00000006073 40467 0.876 - - - - - - 0.876 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
42. CTCF 10811 0.874 - - - - - - 0.874 - - - CCCTC-binding factor, transcript variant X2
43. URI1 ENSGALG00000004506 6024 0.871 - - - - - - 0.871 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
44. FAM160B1 ENSGALG00000031404 3153 0.871 - - - - - - - 0.871 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
45. AP1G1 12403 0.87 - - - - - - - 0.870 - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
46. XRN2 ENSGALG00000008372 22164 0.869 - - - - - - 0.869 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
47. TXNDC17 ENSGALG00000027950 45004 0.869 - - - - - - 0.869 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
48. SF3B3 ENSGALG00000002531 19397 0.868 - - - - - - 0.868 - - - splicing factor 3b subunit 3, transcript variant X2
49. YWHAZ ENSGALG00000031387 84985 0.868 - - - - - - 0.868 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
50. SUPT4H1 ENSGALG00000000944 8675 0.867 - - - - - - - 0.867 - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
51. SF3A2 ENSGALG00000021679 12580 0.865 - - - - - - 0.865 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
52. TADA1L TADA1L 6659 0.865 - - - - - - - 0.865 - -
53. RPF2 ENSGALG00000037087 12788 0.865 - - - - - - 0.865 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
54. CZH9ORF80 CZH9ORF80 12760 0.865 - - - - - - 0.865 - - -
55. PSMB2 ENSGALG00000026421 51885 0.864 - - - - - - 0.864 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
56. VDAC2 ENSGALG00000005002 12592 0.863 - - - - - - - 0.863 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
57. DIABLO ENSGALG00000004412 9499 0.862 - - - - - - - 0.862 - - diablo IAP-binding mitochondrial protein, transcript variant X3
58. MAP3K7 ENSGALG00000015596 15164 0.862 - - - - - - 0.862 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
59. BRP44 BRP44 17093 0.862 - - - - - - 0.862 - - -
60. NOC4L ENSGALG00000002272 9644 0.862 - - - - - - 0.862 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
61. GTSE1 ENSGALG00000004897 2865 0.861 - - - - - - - 0.861 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
62. PRELID1 ENSGALG00000002990 55592 0.861 - - - - - - 0.861 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
63. TRAPPC2 ENSGALG00000016578 8749 0.857 - - - - - - 0.857 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
64. GLRX3 ENSGALG00000010464 22578 0.857 - - - - - - 0.857 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
65. PTK2 ENSGALG00000031741 13103 0.857 - - - - - - 0.857 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
66. ABTB1 ENSGALG00000005999 2446 0.856 - - - - - - - 0.856 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
67. METAP2 ENSGALG00000011377 16311 0.856 - - - - - - 0.856 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
68. CRLS1 ENSGALG00000009214 8652 0.855 - - - - - - 0.855 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
69. ZFP91 ENSGALG00000007287 13681 0.853 - - - - - - - 0.853 - - ZFP91 zinc finger protein
70. GATD3A ENSGALG00000016918 24760 0.853 - - - - - - 0.853 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
71. TSPAN5 ENSGALG00000012227 8703 0.852 - - - - - - - 0.852 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
72. EPFIP1L ENSGALG00000007683 18050 0.852 - - - - - - 0.852 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
73. MRTO4 ENSGALG00000003991 13642 0.851 - - - - - - - 0.851 - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
74. PES1 ENSGALG00000007778 12248 0.849 - - - - - - 0.849 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
75. SNRNP40 ENSGALG00000000615 32298 0.849 - - - - - - 0.849 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
76. ACTR2 ENSGALG00000008779 17812 0.848 - - - - - - 0.848 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
77. DTYMK ENSGALG00000006305 11736 0.848 - - - - - - - 0.848 - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
78. SMC4 ENSGALG00000009553 15715 0.848 - - - - - - 0.848 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
79. NDUFV2 ENSGALG00000036625 29234 0.848 - - - - - - 0.848 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
80. LSM5 ENSGALG00000041625 22307 0.848 - - - - - - 0.848 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
81. ATP2A2 ENSGALG00000032287 12734 0.847 - - - - - - - 0.847 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
82. RUVBL1 ENSGALG00000005931 9379 0.847 - - - - - - 0.847 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
83. FBXL7 ENSGALG00000031947 2480 0.847 - - - - - - - 0.847 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
84. HSD17B12 ENSGALG00000036787 11748 0.846 - - - - - - - 0.846 - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
85. MRPL23 ENSGALG00000006561 13737 0.846 - - - - - - - 0.846 - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
86. TLCD1 ENSGALG00000003973 17569 0.845 - - - - - - - 0.845 - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
87. CAMK2G ENSGALG00000005088 5037 0.844 - - - - - - - 0.844 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
88. RBM34 ENSGALG00000029915 5618 0.844 - - - - - - - 0.844 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
89. NEK6 ENSGALG00000001118 20333 0.844 - - - - - - 0.844 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
90. C1QBP ENSGALG00000001654 34814 0.844 - - - - - - 0.844 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
91. NUP54 ENSGALG00000011506 4945 0.844 - - - - - - 0.844 - - - nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]
92. NRD1 NRD1 10827 0.844 - - - - - - - 0.844 - -
93. FNBP1L ENSGALG00000005850 9219 0.844 - - - - - - - 0.844 - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
94. ACTR3B ENSGALG00000006292 2235 0.843 - - - - - - - 0.843 - - ARP3 actin related protein 3 homolog B, transcript variant X1
95. ENSGALG00000005785 ENSGALG00000005785 1570 0.843 - - - - - - - 0.843 - -
96. MED14 ENSGALG00000016238 4685 0.843 - - - - - - - 0.843 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
97. NUPL1 NUPL1 8197 0.843 - - - - - - 0.843 - - -
98. COMMD4 ENSGALG00000001572 31664 0.843 - - - - - - 0.843 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
99. CNOT2 ENSGALG00000010042 7612 0.843 - - - - - - - 0.843 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
100. MCTS1 ENSGALG00000008517 27514 0.841 - - - - - - 0.841 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]

There are 863 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA