Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RFC4

Gene Name Gene ID Reads Annotation
RFC4 ENSGALG00000008703 5842 replication factor C subunit 4 [Source:NCBI gene;Acc:424958]











Genes with expression patterns similar to RFC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RFC4 ENSGALG00000008703 5842 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
2. PDIA5 ENSGALG00000011689 6913 1.789 - - 0.850 - - - - 0.939 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
3. SGCE ENSGALG00000009670 3070 1.789 - - 0.845 - - - - 0.944 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
4. ISCA1 ENSGALG00000012606 10342 1.744 - - 0.813 - - - - 0.931 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
5. MFF ENSGALG00000003079 5289 1.725 - - 0.776 - - - - 0.949 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
6. SHROOM2 ENSGALG00000030802 4517 1.698 - - 0.755 - - - - 0.943 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
7. SETD1B ENSGALG00000004324 2897 1.538 - - 0.834 - - - 0.704 - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
8. RAD50 ENSGALG00000006794 4308 1.516 - - 0.740 - - - 0.776 - - - RAD50 double strand break repair protein, transcript variant X4
9. SCCPDH ENSGALG00000010641 8624 1.416 - - 0.713 - - - 0.703 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
10. IDI1 ENSGALG00000006723 7761 0.995 - - - - - - - 0.995 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
11. MAP2 ENSGALG00000002789 6597 0.994 - - - - - - - 0.994 - - microtubule associated protein 2, transcript variant X33
12. FAM122A ENSGALG00000006127 9630 0.992 - - - - - - - 0.992 - - family with sequence similarity 122A [Source:NCBI gene;Acc:422237]
13. UBE2F ENSGALG00000003812 13874 0.972 - - - - - - - 0.972 - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
14. COPS3 ENSGALG00000004834 16012 0.962 - - - - - - - 0.962 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
15. GOT2 ENSGALG00000002321 4961 0.954 - - - - - - - 0.954 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
16. TCTEX1D2 ENSGALG00000027722 2201 0.954 - - - - - - - 0.954 - - Tctex1 domain containing 2
17. MRPS31 ENSGALG00000017033 9287 0.954 - - - - - - - 0.954 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
18. C26H6ORF106 C26H6ORF106 2168 0.954 - - - - - - - 0.954 - -
19. PRKAR2A ENSGALG00000007023 909 0.954 - - - - - - - 0.954 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
20. POLR3H ENSGALG00000011947 2899 0.953 - - - - - - - 0.953 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
21. ELMO2 ENSGALG00000007246 4569 0.953 - - - - - - - 0.953 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
22. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.953 - - - - - - - 0.953 - -
23. TLE3 ENSGALG00000008120 2655 0.953 - - - - - - - 0.953 - - transducin like enhancer of split 3, transcript variant X10
24. EPM2A ENSGALG00000012275 872 0.953 - - - - - - - 0.953 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
25. TNPO3 ENSGALG00000039420 5178 0.953 - - - - - - - 0.953 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
26. WDR91 ENSGALG00000011724 5787 0.953 - - - - - - - 0.953 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
27. TNFRSF11B ENSGALG00000043167 911 0.953 - - - - - - - 0.953 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
28. EEFSEC ENSGALG00000038684 298 0.953 - - - - - - - 0.953 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
29. PM20D1 ENSGALG00000000724 2108 0.953 - - - - - - - 0.953 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
30. B9D1 ENSGALG00000005096 760 0.953 - - - - - - - 0.953 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
31. CLIP1 ENSGALG00000004467 1058 0.953 - - - - - - - 0.953 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
32. COL14A1 ENSGALG00000037675 2652 0.953 - - - - - - - 0.953 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
33. CCDC167 ENSGALG00000010151 3567 0.952 - - - - - - - 0.952 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
34. AES ENSGALG00000029503 17676 0.952 - - - - - - - 0.952 - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
35. KCNK5 ENSGALG00000034077 3233 0.952 - - - - - - - 0.952 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
36. LYRM4 ENSGALG00000027339 2917 0.952 - - - - - - - 0.952 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
37. GNG10 ENSGALG00000015683 6905 0.952 - - - - - - - 0.952 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
38. MRPS7 ENSGALG00000007999 5445 0.951 - - - - - - - 0.951 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
39. OTUD4 ENSGALG00000009968 3919 0.951 - - - - - - - 0.951 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
40. KPNA1 ENSGALG00000014426 2724 0.951 - - - - - - - 0.951 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
41. CEP192 ENSGALG00000035625 2270 0.95 - - - - - - - 0.950 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
42. ARFGAP3 ENSGALG00000014140 4612 0.95 - - - - - - - 0.950 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
43. NOVA1 ENSGALG00000009850 7584 0.949 - - - - - - - 0.949 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
44. CAPZA1 ENSGALG00000001547 24242 0.948 - - - - - - - 0.948 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
45. BMP5 ENSGALG00000016293 2119 0.947 - - - - - - - 0.947 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
46. LGMN ENSGALG00000010811 7401 0.945 - - - - - - - 0.945 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
47. RAB24 ENSGALG00000002984 6264 0.945 - - - - - - - 0.945 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
48. L3HYPDH ENSGALG00000012011 2212 0.943 - - - - - - - 0.943 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
49. SLC25A14 ENSGALG00000004063 5574 0.943 - - - - - - - 0.943 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
50. TRIM9 ENSGALG00000012367 1267 0.942 - - - - - - - 0.942 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
51. ATPAF1 ENSGALG00000010444 3677 0.941 - - - - - - - 0.941 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
52. SERPINH1 ENSGALG00000011214 15311 0.941 - - - - - - - 0.941 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
53. HHIP ENSGALG00000009948 1536 0.94 - - - - - - - 0.940 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
54. TRMT10A ENSGALG00000012264 2467 0.94 - - - - - - - 0.940 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
55. BRMS1L ENSGALG00000010093 4964 0.937 - - - - - - - 0.937 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
56. UPF3B ENSGALG00000008618 12350 0.936 - - - - - - - 0.936 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
57. ENSGALG00000002595 ENSGALG00000002595 32163 0.932 - - - - - - - 0.932 - -
58. CYB5B ENSGALG00000000660 9733 0.931 - - - - - - - 0.931 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
59. PTP4A1 ENSGALG00000016271 23953 0.93 - - - - - - - 0.930 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
60. FAM136A ENSGALG00000042163 39487 0.928 - - - - - - - 0.928 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
61. ARID4A ENSGALG00000012037 8554 0.927 - - - - - - - 0.927 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
62. RPB6 RPB6 9517 0.925 - - - - - - - 0.925 - -
63. NMD3 ENSGALG00000009533 8726 0.923 - - - - - - - 0.923 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
64. GTF2E1 ENSGALG00000042320 7712 0.917 - - 0.917 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
65. NAT10 ENSGALG00000014573 12754 0.913 - - - - - - - 0.913 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
66. DPYSL2 ENSGALG00000000227 9668 0.913 - - - - - - - 0.913 - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
67. CAT ENSGALG00000030187 7534 0.913 - - - - - - - 0.913 - - catalase [Source:NCBI gene;Acc:423600]
68. GSTO1 ENSGALG00000008409 7561 0.91 - - - - - - - 0.910 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
69. KIF2C ENSGALG00000010120 8999 0.907 - - - - - - - 0.907 - - kinesin family member 2C, transcript variant X1
70. CNOT6 ENSGALG00000034316 10496 0.907 - - - - - - - 0.907 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
71. ACO2 ENSGALG00000011950 30387 0.905 - - - - - - - 0.905 - - aconitase 2 [Source:NCBI gene;Acc:374009]
72. PCYT1B 190 0.905 - - 0.905 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
73. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.899 - - 0.899 - - - - - - -
74. DGKZ ENSGALG00000008380 5389 0.899 - - - - - - - 0.899 - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
75. SLC41A1 ENSGALG00000000721 1604 0.899 - - 0.899 - - - - - - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
76. AKTIP ENSGALG00000033378 1991 0.898 - - 0.898 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
77. SEC22B ENSGALG00000039704 16080 0.898 - - 0.898 - - - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
78. PRCC ENSGALG00000040696 9346 0.898 - - - - - - - 0.898 - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
79. ID1 ENSGALG00000034661 44524 0.897 - - - - - - - 0.897 - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
80. GTF2H2 ENSGALG00000002399 2361 0.896 - - 0.896 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
81. NDC1 ENSGALG00000031606 3094 0.895 - - 0.895 - - - - - - - NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
82. RALGDS ENSGALG00000003412 4478 0.894 - - 0.894 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
83. OGFOD2 ENSGALG00000003687 1200 0.893 - - 0.893 - - - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25823]
84. ZNF639 ENSGALG00000005944 6387 0.892 - - 0.892 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
85. SNN ENSGALG00000028876 1687 0.892 - - 0.892 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
86. ATG12 ENSGALG00000002345 3607 0.89 - - - - - - - 0.890 - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
87. TUBA4A ENSGALG00000000433 1367 0.889 - - 0.889 - - - - - - - tubulin alpha 4a
88. PHLDA2 ENSGALG00000032687 7733 0.889 - - - - - - - 0.889 - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
89. MRPL38 ENSGALG00000002194 6648 0.889 - - - - - - - 0.889 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
90. ATP10D ENSGALG00000014192 94 0.889 - - 0.889 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
91. LRRC42 ENSGALG00000010743 384 0.889 - - 0.889 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
92. TCTN2 ENSGALG00000023683 3596 0.888 - - 0.888 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
93. CENPO ENSGALG00000016609 1699 0.888 - - 0.888 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
94. GDPD4 ENSGALG00000000690 824 0.888 - - 0.888 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
95. N6AMT2 N6AMT2 4703 0.888 - - - - - - - 0.888 - -
96. IFT81 ENSGALG00000003854 2534 0.887 - - 0.887 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
97. OSGIN2 ENSGALG00000042840 83 0.887 - - 0.887 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
98. PAX1 ENSGALG00000039040 3339 0.887 - - - - - - - 0.887 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
99. LRRC71 ENSGALG00000027351 695 0.887 - - 0.887 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
100. ENSGALG00000004703 ENSGALG00000004703 112 0.886 - - 0.886 - - - - - - -

There are 486 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA