Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for REXO4

Gene Name Gene ID Reads Annotation
REXO4 ENSDARG00000088619 655 REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]










Genes with expression patterns similar to REXO4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. REXO4 ENSDARG00000088619 655 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
2. CABZ01039859.1 ENSDARG00000076361 540 1.729 - - - - - - - 0.878 0.851 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
3. nudt15 ENSDARG00000113961 381 1.722 - - - - - - - 0.847 0.875 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
4. dbnla ENSDARG00000008170 2129 1.709 - - - - - - - 0.861 0.848 drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
5. tbc1d12a ENSDARG00000038237 698 1.705 - - - - - - - 0.852 0.853 TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
6. phactr4b ENSDARG00000032221 1389 1.689 0.747 - - - - - - 0.942 - phosphatase and actin regulator 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1131]
7. arl6 ENSDARG00000032056, ENSDARG00000113281 238 1.675 - - - - - - 0.800 - 0.875 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
8. mybl2 mybl2 1341 1.671 - - - - - 0.773 - 0.898 -
9. BX569781.3 BX569781.3 576 1.653 - - - - - - - 0.797 0.856
10. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.646 - - - - - - - 0.784 0.862 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
11. sult6b1 ENSDARG00000086826 2070 1.64 - - - - - - - 0.840 0.800 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
12. slc25a39 ENSDARG00000007449 630 1.634 - 0.780 - - - - - - 0.854 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
13. scaf4b ENSDARG00000018854 734 1.627 - - - - - - 0.714 0.913 - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
14. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.626 - - - - - - 0.794 0.832 - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
15. Mar-02 Mar-02 1812 1.618 - - - - - - - 0.775 0.843
16. TRIM14_7 TRIM14_7 381 1.613 - - - - - - 0.717 0.896 -
17. gas2l3 ENSDARG00000045880 614 1.612 - - - 0.707 - - - - 0.905 growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
18. prkcbb ENSDARG00000022254 319 1.603 - - - - - - - 0.741 0.862 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
19. smarcd2 ENSDARG00000088877 416 1.594 - - - - - - 0.740 - 0.854 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
20. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.577 - - - - - - 0.762 - 0.815 chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
21. atrip ENSDARG00000063076 385 1.574 0.709 - - - - - - - 0.865 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
22. zfr2 ENSDARG00000071683 780 1.555 - - - - - - 0.727 - 0.828 zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
23. chst11 ENSDARG00000034375 2701 1.552 - - - - - - - 0.793 0.759 carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
24. PACS1 PACS1 2061 1.547 - 0.705 - - - - - - 0.842
25. prkcsh ENSDARG00000004470 1424 1.539 - - - - - - 0.726 - 0.813 protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
26. h2afx ENSDARG00000029406 2116 1.532 - - - - - - 0.727 0.805 - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
27. mrps25 ENSDARG00000041306 3654 1.523 0.704 - - - - - - - 0.819 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
28. si:dkey-18f7.2 si:dkey-18f7.2 895 1.507 - 0.739 - - - - - 0.768 -
29. MBD1 MBD1 557 1.499 - 0.794 - - - - 0.705 - -
30. CASKIN2_1 CASKIN2_1 2299 1.497 - - - - - - 0.727 - 0.770
31. nrp1b ENSDARG00000027290 170 1.497 0.731 - - - - - 0.766 - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
32. wdr36 ENSDARG00000004774 887 1.493 0.772 - - - - - 0.721 - - WD repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-030131-464]
33. rbl1 ENSDARG00000008141 1217 1.489 - 0.760 - - - - 0.729 - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
34. ngdn ENSDARG00000045372 782 1.481 - 0.719 - - - - 0.762 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
35. trim71 ENSDARG00000075593 2750 1.469 - 0.725 - - - - - - 0.744 tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
36. HYAL2 HYAL2 936 1.458 - 0.742 - - - - - 0.716 -
37. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.458 0.746 0.712 - - - - - - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
38. xrcc5_1 ENSDARG00000099298 1533 1.441 - - - - - 0.707 - - 0.734 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
39. bmp7a ENSDARG00000018260 92 1.434 - - - - - 0.704 0.730 - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
40. phf17 phf17 790 1.425 - 0.711 - - - 0.714 - - -
41. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 0.961 - - - - - - - 0.961 - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
42. TSHZ2 ENSDARG00000079201 301 0.961 - - - - - - - 0.961 - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
43. zgc:66474 ENSDARG00000026453 784 0.957 - - - - - - - 0.957 - zgc:66474 [Source:ZFIN;Acc:ZDB-GENE-030131-5711]
44. slc1a7a ENSDARG00000034940 149 0.956 - - - - - - - - 0.956 solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
45. CABZ01088061.1 CABZ01088061.1 695 0.949 - - - - - - - 0.949 -
46. BX682234.2 BX682234.2 28 0.948 - - - - - - - 0.948 -
47. FCHSD2 FCHSD2 35 0.948 - - - - - - - 0.948 -
48. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.948 - - - - - - - 0.948 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
49. CR936337.1 CR936337.1 38 0.948 - - - - - - - 0.948 -
50. si:ch211-106h4.9 ENSDARG00000075706 36 0.948 - - - - - - - 0.948 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
51. si:ch73-67c22.3 si:ch73-67c22.3 30 0.948 - - - - - - - 0.948 -
52. si:dkey-29n10.3 si:dkey-29n10.3 66 0.948 - - - - - - - 0.948 -
53. htra3a ENSDARG00000052895 28 0.948 - - - - - - - 0.948 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
54. CR848836.5 CR848836.5 42 0.948 - - - - - - - 0.948 -
55. CU459160.1 CU459160.1 104 0.948 - - - - - - - 0.948 -
56. JAKMIP3 ENSDARG00000100708 56 0.948 - - - - - - - 0.948 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
57. kctd16b ENSDARG00000020102 83 0.948 - - - - - - - 0.948 - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
58. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.947 - - - - - - - 0.947 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
59. mon1a ENSDARG00000078585 554 0.947 - - - - - - - 0.947 - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
60. si:ch211-67e16.2 41 0.947 - - - - - - - 0.947 - si:ch211-67e16.2, transcript variant X2
61. sv2ba ENSDARG00000057427 33 0.947 - - - - - - - 0.947 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
62. gcdhl gcdhl 38 0.947 - - - - - - - 0.947 -
63. CABZ01114089.1 CABZ01114089.1 127 0.946 - - - - - - - 0.946 -
64. chrna2b ENSDARG00000057025 217 0.946 - - - - - - - 0.946 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
65. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.945 - - - - - - - 0.945 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
66. CABZ01087562.1 CABZ01087562.1 80 0.945 - - - - - - - 0.945 -
67. si:ch211-254c8.2 233 0.945 - - - - - - - 0.945 - si:ch211-254c8.2, transcript variant X4
68. si:dkey-10g2.5 si:dkey-10g2.5 72 0.945 - - - - - - - 0.945 -
69. styx ENSDARG00000057699 48 0.944 - - - - - - - 0.944 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
70. mlh1 ENSDARG00000025948 130 0.944 - - - - - - - 0.944 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
71. cx28.8 ENSDARG00000071042 62 0.944 - - - - - - - 0.944 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
72. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.943 - - - - - - - 0.943 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
73. dnah9l ENSDARG00000062630 268 0.943 - - - - - - - 0.943 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
74. ndc1 ENSDARG00000021120 2417 0.942 - - - - - - - 0.942 - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
75. rad23aa ENSDARG00000020001 374 0.941 - - - - - - - 0.941 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
76. aars2 ENSDARG00000107385 190 0.941 - - - - - - - 0.941 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
77. cacnb2a ENSDARG00000099045 374 0.941 - - - - - - - 0.941 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
78. DENND6A DENND6A 648 0.94 - - - - - - - 0.940 -
79. rab20 ENSDARG00000005049 346 0.94 - - - - - - - 0.940 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
80. SH2B2 ENSDARG00000090421 245 0.94 - - - - - - - 0.940 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
81. MYLK4 MYLK4 180 0.94 - - - - - - - 0.940 -
82. mknk1 ENSDARG00000018411 749 0.94 - - - - - - - 0.940 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
83. phf19 ENSDARG00000078050 117 0.939 - - - - - - - 0.939 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
84. slc2a8 ENSDARG00000104278 764 0.938 - - - - - - - 0.938 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
85. si:dkey-11f4.16 ENSDARG00000099799 121 0.938 - - - - - - - 0.938 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
86. fam63b 484 0.938 - - - - - - - 0.938 - family with sequence similarity 63, member B
87. trabd ENSDARG00000010445 195 0.938 - - - - - - - 0.938 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
88. fbxo7 ENSDARG00000099833 304 0.937 - - - - - - - 0.937 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
89. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.937 - - - - - - - 0.937 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
90. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.937 - - - - - - - 0.937 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
91. rbm27 ENSDARG00000060521 185 0.936 - - - - - - - 0.936 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
92. pggt1b ENSDARG00000103464 441 0.936 - - - - - - - 0.936 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
93. zgc:101640 733 0.936 - - - - - - - 0.936 - zgc:101640, transcript variant X2
94. CU234171.2 CU234171.2 86 0.936 - - - - - - - 0.936 -
95. si:dkey-57k17.1 ENSDARG00000104697 442 0.935 - - - - - - - 0.935 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
96. phf16 phf16 1116 0.934 - - - - - - - 0.934 -
97. SNAPC2 ENSDARG00000036473 158 0.934 - - - - - - - 0.934 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
98. cox15 ENSDARG00000075933, ENSDARG00000115292 499 0.933 - - - - - - - 0.933 - cytochrome c oxidase assembly homolog 15 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-955]
99. TMEM116 TMEM116 96 0.933 - - - - - - - 0.933 -
100. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 0.932 - - - - - - - - 0.932 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]

There are 1056 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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