Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RERE

Gene Name Gene ID Reads Annotation
RERE ENSGALG00000002232 8724 arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]











Genes with expression patterns similar to RERE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RERE ENSGALG00000002232 8724 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
2. C14orf1 C14orf1 14289 1.757 - - - - - - 0.786 0.971 - -
3. PMPCA ENSGALG00000001950 6766 1.73 - - - - - - 0.785 0.945 - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
4. MRPL22 ENSGALG00000003919 2760 1.708 - - - - - - 0.729 0.979 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
5. PI4K2B ENSGALG00000031538 2607 1.702 - - - - - - 0.720 0.982 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
6. FYTTD1 ENSGALG00000007581 9341 1.699 - - - - - - 0.820 0.879 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
7. TUBB6 ENSGALG00000031275 17690 1.678 - - - - - - 0.787 0.891 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
8. EHD3 ENSGALG00000009086 14407 1.661 - - - - - - 0.808 0.853 - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
9. RABIF ENSGALG00000000436 6449 1.632 - - - - - - 0.715 0.917 - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
10. ATG3 ENSGALG00000015204 11277 1.63 - - - - - - 0.726 0.904 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
11. LSM5 ENSGALG00000041625 22307 1.584 - - - - - - 0.743 0.841 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
12. METAP2 ENSGALG00000011377 16311 1.577 - - - - - - 0.782 0.795 - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
13. CREG1 ENSGALG00000040426 1188 0.984 - - - - - - - 0.984 - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
14. FOCAD ENSGALG00000015071 3677 0.984 - - - - - - - 0.984 - - focadhesin [Source:NCBI gene;Acc:427233]
15. KIF21A ENSGALG00000007098 5919 0.984 - - - - - - - 0.984 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
16. IQCK ENSGALG00000028197 596 0.984 - - - - - - - 0.984 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
17. DACT1 ENSGALG00000012023 1008 0.984 - - - - - - - 0.984 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
18. TP73 ENSGALG00000001006 335 0.984 - - - - - - - 0.984 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
19. NHLRC1 ENSGALG00000012688 1476 0.983 - - - - - - - 0.983 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
20. MAN2C1 ENSGALG00000001615 2362 0.983 - - - - - - - 0.983 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
21. RFWD2 1215 0.983 - - - - - - - 0.983 - - ring finger and WD repeat domain 2, transcript variant X6
22. DDX54 ENSGALG00000007490 8729 0.983 - - - - - - - 0.983 - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
23. PALB2 ENSGALG00000006078 1549 0.983 - - - - - - - 0.983 - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
24. COMMD8 ENSGALG00000026279 13509 0.983 - - - - - - - 0.983 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
25. ASAH1 ENSGALG00000026364 2783 0.983 - - - - - - - 0.983 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
26. HGS ENSGALG00000007224 3487 0.982 - - - - - - - 0.982 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
27. ADAT1 ENSGALG00000000908 1484 0.982 - - - - - - - 0.982 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
28. ERP44 ENSGALG00000013452 5352 0.981 - - - - - - - 0.981 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
29. KIF18B ENSGALG00000031553 3192 0.981 - - - - - - - 0.981 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
30. DCAF4 ENSGALG00000009345 2604 0.981 - - - - - - - 0.981 - - DDB1 and CUL4 associated factor 4
31. PSMC3IP ENSGALG00000019741 5428 0.98 - - - - - - - 0.980 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
32. EXOC8 ENSGALG00000043280 3596 0.98 - - - - - - - 0.980 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
33. AIF1L ENSGALG00000029834 13866 0.975 - - - - - - - 0.975 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
34. PIGQ ENSGALG00000001985 1584 0.974 - - - - - - - 0.974 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
35. ZDHHC14 ENSGALG00000013695 2648 0.973 - - - - - - - 0.973 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
36. COMMD10 ENSGALG00000002308 7442 0.972 - - - - - - - 0.972 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
37. COMT ENSGALG00000002024 2483 0.97 - - - - - - - 0.970 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
38. NUMA1 ENSGALG00000001258 8406 0.97 - - - - - - - 0.970 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
39. NDUFA9 ENSGALG00000017282 14358 0.97 - - - - - - - 0.970 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
40. GTF3A ENSGALG00000017098 9264 0.968 - - - - - - - 0.968 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
41. KRR1 ENSGALG00000010227 11783 0.967 - - - - - - - 0.967 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
42. SS18 ENSGALG00000015119 4687 0.967 - - - - - - - 0.967 - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
43. DRG1 ENSGALG00000006921 10791 0.965 - - - - - - - 0.965 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
44. ISY1 ENSGALG00000005012 7477 0.962 - - - - - - - 0.962 - - ISY1 splicing factor homolog
45. LIX1 ENSGALG00000015290 7589 0.948 - - - - - - - 0.948 - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
46. IP6K2 ENSGALG00000005701 12539 0.948 - - - - - - - 0.948 - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
47. BCAR1 ENSGALG00000042895 8222 0.925 - - - - - - - 0.925 - - BCAR1, Cas family scaffold protein [Source:HGNC Symbol;Acc:HGNC:971]
48. RIOK3 ENSGALG00000015004 4249 0.916 - - - - - - - 0.916 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
49. EI24 ENSGALG00000038097 24081 0.914 - - - - - - - 0.914 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
50. GREB1 ENSGALG00000016455 12794 0.905 - - - - - - - 0.905 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
51. PRELP ENSGALG00000034456 4354 0.896 - - - - - - - 0.896 - - proline and arginine rich end leucine rich repeat protein [Source:HGNC Symbol;Acc:HGNC:9357]
52. SGSM3 ENSGALG00000012033 1839 0.892 - - - - - - - 0.892 - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
53. ERP29 ENSGALG00000023510 47100 0.887 - - - - - - - 0.887 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
54. HRAS1 HRAS1 7988 0.879 - - - - - - - 0.879 - -
55. ATP6V1C1 ENSGALG00000034099 9898 0.878 - - - - - - - 0.878 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
56. BTBD1 ENSGALG00000006020 14157 0.877 - - - - - - - 0.877 - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
57. HBE 329974 0.873 - - - - - - - 0.873 - - hemoglobin subunit epsilon
58. YTHDF2 ENSGALG00000034831 15118 0.865 - - - - - - - 0.865 - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
59. HOXA4 ENSGALG00000022622 22327 0.863 - - - - - - - 0.863 - - homeobox A4 [Source:NCBI gene;Acc:395307]
60. HSPD1 ENSGALG00000008094 40870 0.858 - - - - - - - 0.858 - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
61. CUL3 ENSGALG00000005108 9571 0.856 - - - - - - - 0.856 - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
62. SKAP2 ENSGALG00000030081 13746 0.856 - - - - - - 0.856 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
63. TRAPPC2 ENSGALG00000016578 8749 0.854 - - - - - - 0.854 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
64. SCCPDH ENSGALG00000010641 8624 0.852 - - - - - - 0.852 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
65. GPALPP1 ENSGALG00000031567 4221 0.85 - - - - - - 0.850 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
66. RARS ENSGALG00000001850 23283 0.842 - - - - - - 0.842 - - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
67. DDX46 ENSGALG00000006404 8765 0.842 - - - - - - - 0.842 - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
68. ZRANB2 ENSGALG00000011340 18994 0.841 - - - - - - - 0.841 - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
69. RPF2 ENSGALG00000037087 12788 0.841 - - - - - - 0.841 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
70. WASF1 ENSGALG00000015066 5628 0.839 - - - - - - - 0.839 - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
71. GPN2 ENSGALG00000027909 5204 0.839 - - - - - - - 0.839 - - GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]
72. DHCR7 ENSGALG00000004106 4731 0.838 - - - - - - - 0.838 - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
73. AIMP2 ENSGALG00000003400 12655 0.837 - - - - - - 0.837 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
74. FARP1 ENSGALG00000016886 13132 0.836 - - - - - - 0.836 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
75. BMI1 ENSGALG00000041267 6618 0.835 - - - - - - - 0.835 - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
76. EIF3M ENSGALG00000012109 38661 0.829 - - - - - - - 0.829 - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
77. FASTKD2 ENSGALG00000008529 7439 0.829 - - - - - - - 0.829 - - FAST kinase domains 2 [Source:HGNC Symbol;Acc:HGNC:29160]
78. NEDD4L ENSGALG00000034584 5881 0.827 - - - - - - - 0.827 - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
79. THOP1 ENSGALG00000041934 10122 0.826 - - - - - - 0.826 - - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
80. FKBP10 ENSGALG00000025764 7668 0.826 - - - - - - 0.826 - - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
81. EXOC7 ENSGALG00000002050 9612 0.818 - - - - - - - 0.818 - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
82. FAM35A 1187 0.811 - - - - - - 0.811 - - - family with sequence similarity 35 member A
83. SRBD1 ENSGALG00000009990 4568 0.809 - - - - - - 0.809 - - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
84. HAPLN1 ENSGALG00000015627 14942 0.809 - - - - - - 0.809 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
85. YWHAZ ENSGALG00000031387 84985 0.807 - - - - - - 0.807 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
86. MED14 ENSGALG00000016238 4685 0.807 - - - - - - 0.807 - - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
87. NDUFA12 ENSGALG00000011325 19807 0.807 - - - - - - 0.807 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
88. PDZRN3 ENSGALG00000007819 4139 0.804 - - - - - - 0.804 - - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
89. EMG1 ENSGALG00000014568 8102 0.802 - - - - - - 0.802 - - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
90. PSPC1 ENSGALG00000017142 13036 0.802 - - - - - - 0.802 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
91. RYR3 ENSGALG00000009705 30 0.802 - - - - - 0.802 - - - - ryanodine receptor 3 [Source:NCBI gene;Acc:396111]
92. COL5A2 ENSGALG00000031112 18358 0.801 - - - - - - 0.801 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
93. EEF1E1 ENSGALG00000012781 22615 0.801 - - - - - - - 0.801 - - eukaryotic translation elongation factor 1 epsilon 1
94. CALML4 ENSGALG00000007979 6395 0.8 - - - - - - 0.800 - - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
95. PHF5A ENSGALG00000011953 2395 0.798 - - - - - - 0.798 - - - PHD finger protein 5A [Source:NCBI gene;Acc:417991]
96. SPPL3 ENSGALG00000006979 3264 0.798 - - - - - 0.798 - - - - signal peptide peptidase like 3 [Source:HGNC Symbol;Acc:HGNC:30424]
97. HBG1 HBG1 468163 0.795 - - - - - - - 0.795 - -
98. AHCTF1 ENSGALG00000010630 4809 0.795 - - - - - - 0.795 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
99. CDH1 ENSGALG00000000608 6156 0.793 - - - - - - 0.793 - - - cadherin 3 [Source:NCBI gene;Acc:414845]
100. RANGAP1 ENSGALG00000011966 20170 0.793 - - - - - - 0.793 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]

There are 301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA