Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RER1

Gene Name Gene ID Reads Annotation
RER1 ENSGALG00000021683 9074 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]











Genes with expression patterns similar to RER1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RER1 ENSGALG00000021683 9074 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
2. DECR1 ENSGALG00000036990 6360 2.15 - - 0.702 - - - 0.736 0.712 - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
3. PGD ENSGALG00000002797 15115 1.731 - - - - - - 0.805 - - 0.926 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
4. PCNP ENSGALG00000015330 15750 1.696 - - - - - - 0.797 - - 0.899 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
5. GPX8 ENSGALG00000026704 4497 1.692 - - - - - - 0.793 - - 0.899 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
6. TXNDC12 ENSGALG00000010569 13822 1.681 - - - - - - 0.827 - - 0.854 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
7. RHOT1 ENSGALG00000003397 5149 1.675 - - - - - - 0.723 - - 0.952 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
8. COL5A2 ENSGALG00000031112 18358 1.652 - - - - - - - 0.718 - 0.934 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
9. RPL22 ENSGALG00000000719 74238 1.644 - - - - - - 0.857 - - 0.787 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
10. BZW2 ENSGALG00000010809 29213 1.636 - - - - - - - 0.773 - 0.863 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
11. PDE3B ENSGALG00000006035 3732 1.628 - - - - - - - 0.736 - 0.892 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
12. PWP1 ENSGALG00000012631 10536 1.612 - - - - - - 0.779 - - 0.833 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
13. ADIPOR2 ENSGALG00000035533 6523 1.612 - - - - - - 0.800 - - 0.812 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
14. LEPROT ENSGALG00000011047 7132 1.611 - - - - - - - 0.762 - 0.849 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
15. ANAPC16 ENSGALG00000004410 18001 1.607 - - - - - - 0.792 0.815 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
16. SERINC1 ENSGALG00000014868 12484 1.605 - - - - - - 0.809 - - 0.796 serine incorporator 1 [Source:NCBI gene;Acc:421722]
17. PPID ENSGALG00000009451 7529 1.597 - - - - - - 0.817 0.780 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
18. MTMR8 ENSGALG00000007590 6022 1.583 - - - - - - - 0.742 - 0.841 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
19. MYEOV2 MYEOV2 5155 1.581 - - - - - - 0.743 - - 0.838
20. TBPL1 ENSGALG00000013981 3710 1.545 - - - - - - 0.725 - - 0.820 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
21. VAPB ENSGALG00000007549 15511 1.545 - - - - - - 0.757 - - 0.788 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
22. GTPBP4 ENSGALG00000006703 16183 1.544 - - - - - - - 0.789 - 0.755 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
23. EIF2B2 ENSGALG00000010301 10772 1.539 - - - - - - 0.789 - - 0.750 eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
24. CCDC53 CCDC53 3732 1.53 - - - - - - 0.779 0.751 - -
25. TAF5 ENSGALG00000008241 5227 1.516 - - - - - - 0.816 0.700 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
26. MYEF2 ENSGALG00000032546 7436 1.509 - - - - - - 0.740 0.769 - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
27. CCNK ENSGALG00000011138 6416 1.503 - - - - - - - 0.716 - 0.787 cyclin K [Source:NCBI gene;Acc:423446]
28. TMA16 ENSGALG00000009501 6651 1.502 - - - - - - 0.731 - - 0.771 translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
29. SRF ENSGALG00000032029 6983 1.499 - - - - - - - 0.759 - 0.740 serum response factor [Source:NCBI gene;Acc:396103]
30. C9orf64 ENSGALG00000012589 6097 1.493 - - - - - - - 0.725 - 0.768 chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
31. PTPLB PTPLB 13107 1.481 - - - - - - 0.714 - - 0.767
32. GLO1 ENSGALG00000010127 31662 1.422 - - - - - - 0.721 - - 0.701 glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
33. LRRN4 ENSGALG00000008815 481 0.972 - - - - - - - - - 0.972 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
34. ENSGALG00000005389 ENSGALG00000005389 553 0.971 - - - - - - - - - 0.971
35. ARPC1B ENSGALG00000032588 2407 0.97 - - - - - - - - - 0.970 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
36. PROM1 ENSGALG00000014496 2494 0.968 - - - - - - - - - 0.968 prominin 1 [Source:NCBI gene;Acc:422825]
37. CPNE1 ENSGALG00000040856 610 0.967 - - - - - - - - - 0.967 copine 1 [Source:NCBI gene;Acc:419134]
38. FASTKD3 ENSGALG00000033521 1186 0.967 - - - - - - - - - 0.967 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
39. RTN4R ENSGALG00000007732 1515 0.966 - - - - - - - - - 0.966 reticulon 4 receptor
40. MGA 1911 0.966 - - - - - - - - - 0.966 MGA, MAX dimerization protein, transcript variant X15
41. PREX2 ENSGALG00000042354 134 0.965 - - - - - - - - - 0.965 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
42. WDSUB1 ENSGALG00000012574 2038 0.965 - - - - - - - - - 0.965 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
43. SOX6 ENSGALG00000006074 102 0.965 - - - - - - - - - 0.965 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
44. CXADR ENSGALG00000015701 96 0.964 - - - - - - - - - 0.964 coxsackie virus and adenovirus receptor, transcript variant X2
45. 5S_2 5S_2 58 0.964 - - - - - - - - - 0.964
46. PCLO 249 0.964 - - - - - - - - - 0.964 piccolo presynaptic cytomatrix protein
47. FAM190B FAM190B 165 0.964 - - - - - - - - - 0.964
48. TP53BP1 ENSGALG00000042201 708 0.964 - - - - - - - - - 0.964 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
49. CPNE2 ENSGALG00000001316 236 0.964 - - - - - - - - - 0.964 copine 2 [Source:NCBI gene;Acc:415646]
50. IL10R2 IL10R2 72 0.964 - - - - - - - - - 0.964
51. ITSN2 ENSGALG00000016504 651 0.963 - - - - - - - - - 0.963 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
52. APBA3 ENSGALG00000000740 1249 0.963 - - - - - - - - - 0.963 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
53. CETN1 ENSGALG00000026741 7243 0.963 - - - - - - - - - 0.963 centrin 1 [Source:NCBI gene;Acc:422668]
54. GRTP1 ENSGALG00000016828 3145 0.963 - - - - - - - - - 0.963 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
55. ZNF6 ZNF6 138 0.963 - - - - - - - - - 0.963
56. SLC2A3 SLC2A3 527 0.961 - - - - - - - - - 0.961
57. C14orf80 C14orf80 1921 0.961 - - - - - - - - - 0.961
58. CCT8 ENSGALG00000015821 12161 0.961 - - - - - - - - - 0.961 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
59. PM20D2 ENSGALG00000015779 1301 0.961 - - - - - - - - - 0.961 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
60. AURKA ENSGALG00000007768 793 0.96 - - - - - - - - - 0.960 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
61. C1orf198 ENSGALG00000026600 5651 0.96 - - - - - - - - - 0.960 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
62. SSH1 ENSGALG00000004928 222 0.96 - - - - - - - - - 0.960 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
63. PDPN ENSGALG00000030096 647 0.958 - - - - - - - - - 0.958 podoplanin, transcript variant X4
64. CRYM ENSGALG00000002484 3558 0.958 - - - - - - - - - 0.958 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
65. TMEM130 ENSGALG00000003569 949 0.957 - - - - - - - - - 0.957 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
66. ITGA9 ENSGALG00000029378 415 0.957 - - - - - - - - - 0.957 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
67. HYAL3 ENSGALG00000029000 712 0.956 - - - - - - - - - 0.956 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
68. IDS ENSGALG00000009154 1177 0.956 - - - - - - - - - 0.956 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
69. WRNIP1 ENSGALG00000012856 1954 0.956 - - - - - - - - - 0.956 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
70. HAUS8 ENSGALG00000003727 351 0.956 - - - - - - - - - 0.956 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
71. C10orf118 C10orf118 762 0.956 - - - - - - - - - 0.956
72. SPDL1 ENSGALG00000001942 4403 0.955 - - - - - - - - - 0.955 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
73. MRPL50 ENSGALG00000015543 11649 0.955 - - - - - - - - - 0.955 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
74. NARS ENSGALG00000040506 9506 0.955 - - - - - - - - - 0.955 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
75. CASKIN1 604 0.955 - - - - - - - - - 0.955 CASK interacting protein 1, transcript variant X4
76. PTX3 ENSGALG00000028284 2984 0.954 - - - - - - - - - 0.954 pentraxin 3 [Source:NCBI gene;Acc:548626]
77. DIAPH3 ENSGALG00000016937 1069 0.954 - - - - - - - - - 0.954 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
78. WHSC1 1712 0.954 - - - - - - - - - 0.954 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
79. GRK4 ENSGALG00000015645 1065 0.954 - - - - - - - - - 0.954 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
80. SGSH ENSGALG00000007027 1115 0.954 - - - - - - - - - 0.954 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
81. MSI1 ENSGALG00000007227 2279 0.953 - - - - - - - - - 0.953 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
82. CDH1-A CDH1-A 343 0.953 - - - - - - - - - 0.953
83. SSR2 ENSGALG00000000764 32190 0.953 - - - - - - - - - 0.953 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
84. LPCAT2 ENSGALG00000003574 893 0.952 - - - - - - - - - 0.952 lysophosphatidylcholine acyltransferase 2 [Source:NCBI gene;Acc:415716]
85. PLA2G15 ENSGALG00000041787 762 0.951 - - - - - - - - - 0.951 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
86. UQCR11 ENSGALG00000001096 25245 0.951 - - - - - - - - - 0.951 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
87. ARHGAP21 ENSGALG00000007721 3961 0.951 - - - - - - - - - 0.951 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
88. INTS10 ENSGALG00000010130 6320 0.951 - - - - - - - - - 0.951 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
89. FAM129A ENSGALG00000004812 269 0.951 - - - - - - - - - 0.951 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
90. CCDC51 ENSGALG00000006465 1845 0.951 - - - - - - - - - 0.951 coiled-coil domain containing 51, transcript variant X1
91. TXNDC11 ENSGALG00000003154 2224 0.95 - - - - - - - - - 0.950 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
92. MB21D1 2460 0.95 - - - - - - - - - 0.950 Mab-21 domain containing 1
93. TMEM68 ENSGALG00000031835 1691 0.95 - - - - - - - - - 0.950 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
94. MTSS1 ENSGALG00000041969 1312 0.95 - - - - - - - - - 0.950 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
95. CPT2 ENSGALG00000010681 3211 0.95 - - - - - - - - - 0.950 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
96. FSTL4 ENSGALG00000031487 529 0.949 - - - - - - - - - 0.949 follistatin like 4 [Source:NCBI gene;Acc:395163]
97. HEXA ENSGALG00000043828 4789 0.949 - - - - - - - - - 0.949 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
98. C26H6ORF89 C26H6ORF89 1826 0.948 - - - - - - - - - 0.948
99. SLC35B1 ENSGALG00000035057 10683 0.948 - - - - - - - - - 0.948 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
100. TANGO2 ENSGALG00000002056 1971 0.948 - - - - - - - - - 0.948 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]

There are 706 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA