Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RDX

Gene Name Gene ID Reads Annotation
RDX ENSGALG00000017153 6734 radixin [Source:NCBI gene;Acc:395511]











Genes with expression patterns similar to RDX

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RDX ENSGALG00000017153 6734 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 radixin [Source:NCBI gene;Acc:395511]
2. PSMD1 ENSGALG00000007664 7609 2.375 0.792 - 0.700 - - - - 0.883 - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
3. FUBP1 ENSGALG00000008939 2850 2.341 - - 0.740 - - - - 0.828 - 0.773 far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
4. DDX46 ENSGALG00000006404 8765 1.69 0.810 - - - - - 0.880 - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
5. TCERG1 ENSGALG00000007528 6346 1.667 0.867 - - - - - - - - 0.800 transcription elongation regulator 1 [Source:HGNC Symbol;Acc:HGNC:15630]
6. AKAP9 ENSGALG00000040724 7446 1.659 0.836 - - - - - - 0.823 - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
7. CLUH ENSGALG00000005854 2100 1.656 - - - - - - - 0.828 - 0.828 clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
8. LAMP2 ENSGALG00000008572 198 1.646 - - - - - - - 0.847 - 0.799 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
9. CCDC51 ENSGALG00000006465 1845 1.63 - - - - - - - 0.840 - 0.790 coiled-coil domain containing 51, transcript variant X1
10. NXT2 ENSGALG00000008092 2477 1.628 - - 0.727 - - - - 0.901 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
11. MPZL3 ENSGALG00000021271 1857 1.622 - - - - - - 0.840 0.782 - - myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
12. ANKRD17 ENSGALG00000011642 3192 1.616 0.780 - - - - - - - - 0.836 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
13. ENSGALG00000004032 ENSGALG00000004032 2010 1.613 - - 0.767 - - - - 0.846 - -
14. TRIM71 ENSGALG00000019622 1633 1.612 0.743 - - - - - - 0.869 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
15. AMER1 ENSGALG00000007599 994 1.609 - - - - - - 0.738 0.871 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
16. CCDC88A ENSGALG00000043587 2208 1.609 0.773 - - - - - - - - 0.836 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
17. ANKRD11 ENSGALG00000006222 12327 1.598 0.805 - - - - - - - - 0.793 ankyrin repeat domain 11, transcript variant X2
18. LOC422106 ENSGALG00000019757 453 1.595 - - - - - - 0.759 0.836 - - uncharacterized LOC422106
19. C26H6ORF89 C26H6ORF89 1826 1.591 - - - - - - 0.803 - - 0.788
20. PLA2G15 ENSGALG00000041787 762 1.59 - - - - - - 0.785 - - 0.805 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
21. TALPID3 TALPID3 1896 1.59 - - - - - - 0.731 0.859 - -
22. HS2ST1 ENSGALG00000028423 4153 1.582 - - - - - - - 0.836 - 0.746 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
23. NAP1L1 ENSGALG00000010238 14506 1.57 0.861 - 0.709 - - - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
24. SRSF11 ENSGALG00000011305 10435 1.564 0.822 - 0.742 - - - - - - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
25. ALDH7A1 ENSGALG00000008229 5891 1.563 - - - - - - - 0.817 - 0.746 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
26. QDPR ENSGALG00000030070 6953 1.561 - - - - - - - 0.771 - 0.790 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
27. YAF2 ENSGALG00000009540 8452 1.561 - - 0.769 - - - - - - 0.792 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
28. QSER1 ENSGALG00000012030 4490 1.559 0.740 - - - - - - - - 0.819 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
29. SLK ENSGALG00000008318 2220 1.557 0.720 - - - - - - - - 0.837 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
30. SMARCC1 ENSGALG00000032642 4842 1.551 0.755 - - - - - - - - 0.796 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
31. COG5 ENSGALG00000042764 4205 1.54 - - - - - - 0.734 - - 0.806 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
32. ZNF106 ENSGALG00000009081 1520 1.536 0.710 - - - - - - - - 0.826 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
33. MAP1B ENSGALG00000014999 6288 1.534 0.776 - 0.758 - - - - - - - microtubule associated protein 1B
34. YBX1 ENSGALG00000004848 20992 1.532 0.774 - 0.758 - - - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
35. HMGB1 ENSGALG00000042875 83509 1.529 0.819 0.710 - - - - - - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
36. SLC30A5 ENSGALG00000014787 5573 1.524 - - - - - - 0.721 - - 0.803 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
37. ZFR ENSGALG00000003235 8466 1.523 - - - - - - - 0.729 - 0.794 zinc finger RNA binding protein, transcript variant X3
38. EIF5B ENSGALG00000016764 30681 1.517 0.795 - 0.722 - - - - - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
39. F2RL2 ENSGALG00000023379 1049 1.514 - - - - - - - 0.813 - 0.701 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
40. CABLES1 ENSGALG00000014998 1636 1.509 - - - - - - 0.745 - - 0.764 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
41. MGA 1911 1.508 0.727 - - - - - - - - 0.781 MGA, MAX dimerization protein, transcript variant X15
42. TMLHE ENSGALG00000007443 3619 1.506 - - - - - - - 0.721 - 0.785 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
43. USP16 ENSGALG00000015813 6803 1.504 0.793 - - - - - - 0.711 - - ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
44. ZNF395 ENSGALG00000034140 1868 1.492 - - - - - - 0.735 - - 0.757 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
45. SLC35B1 ENSGALG00000035057 10683 1.481 - - - - - - - 0.739 - 0.742 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
46. ZZZ3 ENSGALG00000008988 3132 1.477 - - - - - - 0.718 0.759 - - zinc finger ZZ-type containing 3, transcript variant X5
47. ATP2B2 ENSGALG00000030908 584 1.477 - - 0.704 - - - - 0.773 - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
48. PRPF4B ENSGALG00000043751 8266 1.476 0.725 - - - - - - - - 0.751 pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346]
49. PHIP ENSGALG00000015889 2348 1.469 0.720 - 0.749 - - - - - - - pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
50. SYNCRIP ENSGALG00000015830 30555 1.437 - - 0.717 - - - - - - 0.720 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
51. CKB ENSGALG00000011511 2100 1.429 - - 0.703 - - - 0.726 - - - creatine kinase B [Source:NCBI gene;Acc:396248]
52. ZC3H11A ENSGALG00000000541 2712 1.426 0.707 - - - - - - - - 0.719 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
53. ZRANB1 ENSGALG00000031474 3909 1.421 - - - - - - 0.713 - - 0.708 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
54. SP3 ENSGALG00000031796 8997 1.418 - - - - - - 0.702 - - 0.716 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
55. DEDD ENSGALG00000043129 3422 0.898 - - - - - - - 0.898 - - death effector domain containing [Source:HGNC Symbol;Acc:HGNC:2755]
56. ECI2 ENSGALG00000012809 3692 0.897 - - - - - - - 0.897 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
57. C15ORF23 C15ORF23 14264 0.891 - - - - - - - 0.891 - -
58. H4-I H4-I 2327 0.889 - - - - - - - 0.889 - -
59. CENPC1 CENPC1 3324 0.887 - - - - - - - 0.887 - -
60. SEC11C ENSGALG00000031663 4266 0.886 - - - - - - - 0.886 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
61. GPX7 ENSGALG00000010633 7224 0.886 - - - - - - - 0.886 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
62. SNAPC3 ENSGALG00000011323 1742 0.884 - - - - - - - 0.884 - - small nuclear RNA activating complex polypeptide 3 [Source:HGNC Symbol;Acc:HGNC:11136]
63. COL6A2 ENSGALG00000039216 892 0.883 - - - - - - - 0.883 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
64. ANKRA2 ENSGALG00000013511 3460 0.882 - - - - - - - 0.882 - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
65. SALL1 ENSGALG00000039238 3740 0.882 - - - - - - - 0.882 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
66. DNAJB12 ENSGALG00000034104 3021 0.881 - - - - - - - 0.881 - - DnaJ heat shock protein family (Hsp40) member B12 [Source:NCBI gene;Acc:423707]
67. E2F4 ENSGALG00000001722 2916 0.88 - - - - - - - 0.880 - - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
68. CHUK ENSGALG00000003289 5698 0.878 - - - - - - - 0.878 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
69. PYGL ENSGALG00000012365 4691 0.876 - - - - - - - 0.876 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
70. C4BPA ENSGALG00000001175 4278 0.874 - - - - - - - 0.874 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
71. DBR1 ENSGALG00000043797 1896 0.874 - - - - - - - 0.874 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
72. CHALK5 CHALK5 1351 0.872 - - - - - - - 0.872 - -
73. PRRG1 ENSGALG00000016266 3473 0.87 - - - - - - - - - 0.870 proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
74. ARAP2 ENSGALG00000041373 233 0.867 - - - - - - - 0.867 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
75. LUZP1 ENSGALG00000025858 947 0.867 - - - - - - 0.867 - - - leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
76. SOX5 ENSGALG00000032768 998 0.867 - - - - - - - 0.867 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
77. FBXW7 ENSGALG00000010103 5982 0.866 - - - - - - - 0.866 - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
78. ENSGALG00000014441 ENSGALG00000014441 1442 0.866 - - - - - - - 0.866 - -
79. SRP68 ENSGALG00000002062 7370 0.866 - - - - - - - 0.866 - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
80. LTV1 ENSGALG00000013765 2917 0.863 - - - - - - - 0.863 - - LTV1 ribosome biogenesis factor
81. DNAJC11 ENSGALG00000000627 769 0.862 - - - - - - - 0.862 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
82. CECR5L ENSGALG00000005020 116 0.862 - - - - - - - 0.862 - - cat eye syndrome chromosome region, candidate 5-like
83. YARS ENSGALG00000003563 11093 0.861 - - - - - - - 0.861 - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
84. SENP5 ENSGALG00000008545 909 0.861 - - - - - - - 0.861 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
85. ATRX ENSGALG00000007843 34172 0.86 0.860 - - - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
86. NRG4 ENSGALG00000002952 1440 0.859 - - - - - - - 0.859 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
87. POLA1 ENSGALG00000016312 9440 0.858 - - - - - - - 0.858 - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
88. SHC2 ENSGALG00000001289 2140 0.857 - - - - - - 0.857 - - - SHC (Src homology 2 domain containing) transforming protein 2, transcript variant X2
89. TES ENSGALG00000031934 5908 0.857 - - - - - - - 0.857 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
90. VRK1 ENSGALG00000011116 4524 0.856 0.856 - - - - - - - - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
91. LIPG ENSGALG00000043734 2490 0.856 - - - - - - - 0.856 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
92. TUSC3 ENSGALG00000013674 2848 0.856 - - - - - - - 0.856 - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
93. RIN3 ENSGALG00000010806 729 0.855 - - - - - - - 0.855 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
94. TOX ENSGALG00000039102 1434 0.855 - - - - - - - 0.855 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
95. NOL12 ENSGALG00000012410 5658 0.854 - - - - - - - 0.854 - - nucleolar protein 12
96. HSPA13 ENSGALG00000019201 712 0.854 - - - - - - - 0.854 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
97. AGA ENSGALG00000010716 2299 0.854 - - - - - - 0.854 - - - aspartylglucosaminidase [Source:NCBI gene;Acc:422558]
98. LRRC45 ENSGALG00000002877 1751 0.853 - - - - - - - 0.853 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
99. DARS2 ENSGALG00000023749 2386 0.853 - - - - - - - 0.853 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
100. FAM217B ENSGALG00000026542 2066 0.853 - - - - - - - 0.853 - - family with sequence similarity 217 member B [Source:HGNC Symbol;Acc:HGNC:16170]

There are 713 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA