Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RDM1

Gene Name Gene ID Reads Annotation
RDM1 ENSGALG00000000243 3388 RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]











Genes with expression patterns similar to RDM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RDM1 ENSGALG00000000243 3388 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
2. LIG3 ENSGALG00000002288 7198 1.739 - - - - - - 0.790 0.949 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
3. MLLT10 ENSGALG00000007928 4022 1.739 - - - - - - 0.838 0.901 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
4. FBXO33 ENSGALG00000010192 2917 1.736 - - - - - - 0.809 0.927 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
5. ADIPOR1 ENSGALG00000000094 1862 1.724 - - - - - - 0.797 0.927 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
6. PYCR1 ENSGALG00000007300 7987 1.71 - - - - - - 0.774 0.936 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
7. CLN6 ENSGALG00000007981 5656 1.71 - - - - - - 0.857 0.853 - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
8. RNF144A ENSGALG00000028709 2855 1.695 - - - - - - 0.799 0.896 - - ring finger protein 144A, transcript variant X1
9. ARFRP1 ENSGALG00000006101 3743 1.685 - - - - - - 0.750 0.935 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
10. MYH15 ENSGALG00000015358 6304 1.656 - - - - - - 0.738 0.918 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
11. BAG4 ENSGALG00000003254 5751 1.635 - - - - - - 0.848 0.787 - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
12. SCO1 ENSGALG00000030475 7304 1.615 - - - - - - - 0.910 0.705 - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
13. NIFK ENSGALG00000011650 14990 1.522 - - - - - - 0.709 0.813 - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
14. RALGAPB ENSGALG00000001420 5112 1.493 - - - - - - 0.705 0.788 - - Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
15. CKAP2 ENSGALG00000017025 25020 0.961 - - - - - - - 0.961 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
16. MAPK9 ENSGALG00000039099 5467 0.959 - - - - - - - 0.959 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
17. KHDRBS1 ENSGALG00000003272 4249 0.958 - - - - - - - 0.958 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
18. CAMSAP2 ENSGALG00000002145 6109 0.957 - - - - - - - 0.957 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
19. CHMP6 ENSGALG00000026428 18026 0.954 - - - - - - - 0.954 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
20. PEO1 PEO1 6747 0.954 - - - - - - - 0.954 - -
21. TCEA1 ENSGALG00000015274 2706 0.954 - - - - - - - 0.954 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
22. PPCS ENSGALG00000004882 5759 0.953 - - - - - - - 0.953 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
23. SMIM12 ENSGALG00000030261 5860 0.953 - - - - - - - 0.953 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
24. FGFR1OP ENSGALG00000011423 2418 0.95 - - - - - - - 0.950 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
25. SRP72 ENSGALG00000011403 13666 0.949 - - - - - - - 0.949 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
26. MRPL18 ENSGALG00000011625 7855 0.949 - - - - - - - 0.949 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
27. GOLGB1 ENSGALG00000041494 2376 0.947 - - - - - - - 0.947 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
28. KDM4A ENSGALG00000010074 7219 0.947 - - - - - - - 0.947 - - lysine demethylase 4A
29. MAST2 ENSGALG00000010313 2975 0.946 - - - - - - - 0.946 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
30. BRCC3 ENSGALG00000005383 4844 0.946 - - - - - - - 0.946 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
31. MTERFD1 MTERFD1 3640 0.945 - - - - - - - 0.945 - -
32. TMEM59 ENSGALG00000010746 4669 0.945 - - - - - - - 0.945 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
33. NR2F2 ENSGALG00000007000 4911 0.944 - - - - - - - 0.944 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
34. LATS2 4776 0.944 - - - - - - - 0.944 - - large tumor suppressor kinase 2
35. DCTN5 ENSGALG00000006088 3113 0.943 - - - - - - - 0.943 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
36. REV3L ENSGALG00000015033 1917 0.943 - - - - - - - 0.943 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
37. AHCTF1 ENSGALG00000010630 4809 0.943 - - - - - - - 0.943 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
38. CARS2 ENSGALG00000016847 3814 0.942 - - - - - - - 0.942 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
39. TRIM24 ENSGALG00000012823 2725 0.941 - - - - - - - 0.941 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
40. VCAN ENSGALG00000015624 11489 0.941 - - - - - - - 0.941 - - versican [Source:NCBI gene;Acc:395565]
41. UCK2 ENSGALG00000003510 2512 0.941 - - - - - - - 0.941 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
42. DNAJA1 ENSGALG00000023066 3820 0.941 - - - - - - - 0.941 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
43. AMMECR1L ENSGALG00000026728 2134 0.941 - - - - - - - 0.941 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
44. MRPS23 ENSGALG00000005559 10360 0.94 - - - - - - - 0.940 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
45. RNF214 ENSGALG00000036993 3729 0.939 - - - - - - - 0.939 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
46. BTG1L ENSGALG00000004676 2293 0.939 - - - - - - - 0.939 - - protein BTG1-like
47. gga-mir-1772 ENSGALG00000025300 2892 0.939 - - - - - - - 0.939 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
48. CEP170 ENSGALG00000010733 4177 0.938 - - - - - - - 0.938 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
49. MTMR9 ENSGALG00000016649 2055 0.938 - - - - - - - 0.938 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
50. UBAC2 ENSGALG00000016880 1343 0.937 - - - - - - - 0.937 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
51. SMC6 ENSGALG00000016467 3321 0.937 - - - - - - - 0.937 - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
52. TRMT44 ENSGALG00000015594 1490 0.937 - - - - - - - 0.937 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
53. ARHGEF4 ENSGALG00000002193 558 0.936 - - - - - - - 0.936 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
54. DUSP14 ENSGALG00000027641 3662 0.936 - - - - - - - 0.936 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
55. SMARCC1 ENSGALG00000032642 4842 0.936 - - - - - - - 0.936 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
56. STX18 ENSGALG00000015012 1489 0.935 - - - - - - - 0.935 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
57. ENSGALG00000003150 ENSGALG00000003150 10001 0.935 - - - - - - - 0.935 - -
58. CHMP3 ENSGALG00000015805 11581 0.935 - - - - - - - 0.935 - - charged multivesicular body protein 3
59. SLC25A1 ENSGALG00000041760 4744 0.934 - - - - - - - 0.934 - - solute carrier family 25 member 1, transcript variant X2
60. NDUFB3 ENSGALG00000008239 15511 0.934 - - - - - - - 0.934 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
61. VGLL4 ENSGALG00000004937 3762 0.934 - - - - - - - 0.934 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
62. PWWP2A ENSGALG00000038202 3686 0.933 - - - - - - - 0.933 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
63. NET1 ENSGALG00000008437 9850 0.933 - - - - - - - 0.933 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
64. PKP4 ENSGALG00000012561 3087 0.933 - - - - - - - 0.933 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
65. BCLAF1 ENSGALG00000013935 7596 0.932 - - - - - - - 0.932 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
66. FGF18 ENSGALG00000002203 551 0.932 - - - - - - - 0.932 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
67. ACSL1 ENSGALG00000010628 2560 0.932 - - - - - - - 0.932 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
68. HDGFL2 ENSGALG00000027068 1300 0.93 - - - - - - - 0.930 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
69. ALG9 ENSGALG00000021174 745 0.93 - - - - - - - 0.930 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
70. ABCA3 ENSGALG00000037837 1606 0.93 - - - - - - - 0.930 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
71. REXO1 ENSGALG00000001043 3179 0.93 - - - - - - - 0.930 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
72. gga-mir-1306 ENSGALG00000025271 1231 0.929 - - - - - - - 0.929 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
73. APOOL ENSGALG00000006978 1953 0.929 - - - - - - - 0.929 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
74. BAG3 ENSGALG00000009433 6152 0.929 - - - - - - - 0.929 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
75. NSRP1 ENSGALG00000004186 1683 0.928 - - - - - - - 0.928 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
76. DEPDC7 ENSGALG00000011681 1181 0.928 - - - - - - - 0.928 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
77. SNAP29 ENSGALG00000040128 3581 0.927 - - - - - - - 0.927 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
78. RGS17 ENSGALG00000026034 707 0.927 - - - - - - - 0.927 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
79. NEMF ENSGALG00000012263 2250 0.927 - - - - - - - 0.927 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
80. ARRDC4 ENSGALG00000007012 1039 0.926 - - - - - - - 0.926 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
81. TSC22D2 ENSGALG00000027591 6594 0.926 - - - - - - - 0.926 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
82. CHAF1A ENSGALG00000001126 6506 0.926 - - - - - - - 0.926 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
83. NDUFAF1 ENSGALG00000008587 14779 0.926 - - - - - - - 0.926 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
84. ZC3H3 ENSGALG00000043265 1638 0.925 - - - - - - - 0.925 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
85. PNISR ENSGALG00000015483 7711 0.925 - - - - - - - 0.925 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
86. RP9 ENSGALG00000035453 1186 0.925 - - - - - - - 0.925 - - retinitis pigmentosa 9 (autosomal dominant)
87. H3-I H3-I 1498 0.924 - - - - - - - 0.924 - -
88. CC2D2A ENSGALG00000014514 1180 0.923 - - - - - - - 0.923 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
89. NUP210L 370 0.922 - - - - - - - 0.922 - - nucleoporin 210 like
90. INOS INOS 313 0.922 - - - - - - - 0.922 - -
91. C7orf25 ENSGALG00000040161 694 0.922 - - - - - - - 0.922 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
92. EDEM1 ENSGALG00000008320 3117 0.922 - - - - - - - 0.922 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
93. GTDC1 ENSGALG00000012424 1446 0.921 - - - - - - - 0.921 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
94. ERGIC2 ENSGALG00000007183 12870 0.921 - - - - - - - 0.921 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
95. EFHD1 ENSGALG00000001428 2831 0.921 - - - - - - - 0.921 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
96. ITGA9 ENSGALG00000029378 415 0.921 - - - - - - - 0.921 - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
97. TFEB ENSGALG00000039878 881 0.921 - - - - - - - 0.921 - - transcription factor EB [Source:NCBI gene;Acc:419922]
98. TMEM57 ENSGALG00000001067 3367 0.92 - - - - - - - 0.920 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
99. SLC35E3 ENSGALG00000009940 8560 0.92 - - - - - - - 0.920 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
100. C5orf24 ENSGALG00000006371 1573 0.919 - - - - - - - 0.919 - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]

There are 452 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA