Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RDH11

Gene Name Gene ID Reads Annotation
RDH11 ENSGALG00000009538 110 retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]











Genes with expression patterns similar to RDH11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RDH11 ENSGALG00000009538 110 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]
2. ENSGALG00000002367 ENSGALG00000002367 10 0.953 - - - - - - - 0.953 - -
3. ANKRD33B ENSGALG00000038328 22 0.953 - - - - - - - 0.953 - - ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
4. SLC22A16 ENSGALG00000015055 21 0.953 - - - - - - - 0.953 - - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
5. MCM9 ENSGALG00000014883 8 0.937 - - - - - - - 0.937 - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
6. FGA ENSGALG00000009266 291 0.937 - - - - - - - 0.937 - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
7. SNX25 ENSGALG00000010610 31 0.937 - - - - - - - 0.937 - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
8. RPS6KA6 ENSGALG00000007097 94 0.937 - - - - - - - 0.937 - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
9. SMAP2 ENSGALG00000029244 498 0.937 - - - - - - - 0.937 - - small ArfGAP2 [Source:NCBI gene;Acc:419641]
10. BOK ENSGALG00000005772 117 0.937 - - - - - - - 0.937 - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
11. ALDH6A1 ENSGALG00000010211 29 0.937 - - - - - - - 0.937 - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
12. AK8 ENSGALG00000040923 10 0.937 - - - - - - - 0.937 - - adenylate kinase 8, transcript variant X1
13. STARD13 ENSGALG00000017065 18 0.937 - - - - - - - 0.937 - - StAR related lipid transfer domain containing 13, transcript variant X3
14. TTLL2 ENSGALG00000011344 14 0.937 - - - - - - - 0.937 - - tubulin tyrosine ligase like 2, transcript variant X1
15. PARP12 ENSGALG00000046187 10 0.937 - - - - - - - 0.937 - - poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
16. MEST ENSGALG00000008111 1 0.937 - - - - - - - 0.937 - - mesoderm specific transcript [Source:HGNC Symbol;Acc:HGNC:7028]
17. AK7 ENSGALG00000011093 9 0.937 - - - - - - - 0.937 - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
18. SEC16A ENSGALG00000002364 19 0.937 - - - - - - - 0.937 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
19. TFRC 31 0.937 - - - - - - - 0.937 - - transferrin receptor, transcript variant X1
20. FBXO16 7 0.937 - - - - - - - 0.937 - - F-box protein 16, transcript variant X1
21. PALM ENSGALG00000026055 8 0.937 - - - - - - - 0.937 - - paralemmin [Source:NCBI gene;Acc:101750199]
22. TMEM255A ENSGALG00000008604 7 0.936 - - - - - - - 0.936 - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
23. NTRK1 ENSGALG00000019019 17 0.936 - - - - - - - 0.936 - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
24. TRIM14 ENSGALG00000015315 22 0.936 - - - - - - - 0.936 - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
25. WDR16 WDR16 22 0.936 - - - - - - - 0.936 - -
26. IL13RA1 ENSGALG00000044480 24 0.936 - - - - - - - 0.936 - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
27. RELN ENSGALG00000008193 43 0.936 - - - - - - - 0.936 - - reelin [Source:NCBI gene;Acc:427850]
28. ARSA ENSGALG00000035824 299 0.934 - - - - - - - 0.934 - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
29. TROJANZ ENSGALG00000027747 37 0.929 - - - - - - - 0.929 - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
30. PACSIN1 ENSGALG00000002802 6 0.929 - - - - - - - 0.929 - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
31. IGSF11 ENSGALG00000015084 194 0.926 - - - - - - - 0.926 - - Gallus gallus immunoglobulin superfamily member 11 (IGSF11), mRNA. [Source:RefSeq mRNA;Acc:NM_001318422]
32. ASB12 ENSGALG00000007594 185 0.922 - - - - - - - 0.922 - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
33. MYO1E ENSGALG00000004150 40 0.917 - - - - - - - 0.917 - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
34. BRINP3 ENSGALG00000033407 40 0.885 - - - - - - - 0.885 - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
35. ARMC2 ENSGALG00000015289 18 0.881 - - - - - - - 0.881 - - armadillo repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:23045]
36. SLC35B2 ENSGALG00000010174 3 0.881 - - - - - - - 0.881 - - solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]
37. CA12 ENSGALG00000003456 62 0.879 - - - - - - - 0.879 - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
38. STAT1 ENSGALG00000007651 24 0.867 - - - - - - - 0.867 - - signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:424044]
39. HEMGN ENSGALG00000045740 8 0.867 - - - - - - - 0.867 - - hemogen, transcript variant X1
40. U11 U11 11 0.866 - - - - - 0.866 - - - -
41. STK32B ENSGALG00000029510 95 0.861 - - - - - - - 0.861 - - serine/threonine kinase 32B [Source:HGNC Symbol;Acc:HGNC:14217]
42. TEKT4 ENSGALG00000005247 20 0.854 - - - - - - - 0.854 - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
43. TDP1 ENSGALG00000010669 57 0.854 - - - - - - - 0.854 - - tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:18884]
44. ENSGALG00000023180 ENSGALG00000023180 83 0.854 - - - - - - - 0.854 - -
45. SMEK1 SMEK1 95 0.854 - - - - - - - 0.854 - -
46. ZFYVE26 ENSGALG00000028762 18 0.854 - - - - - - - 0.854 - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
47. RASEF ENSGALG00000012576 155 0.852 - - - - - - - 0.852 - - RAS and EF-hand domain containing [Source:HGNC Symbol;Acc:HGNC:26464]
48. PCDH20 ENSGALG00000016934 187 0.851 - - - - - - - - - 0.851 protocadherin 20
49. GABBR2 ENSGALG00000013200 176 0.849 - - - - - - - 0.849 - - gamma-aminobutyric acid type B receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:4507]
50. SNORA17 SNORA17 39 0.845 - - - - - - - 0.845 - -
51. gga-mir-1652 ENSGALG00000025444 119 0.845 - - - - - - - 0.845 - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
52. AKAP11 ENSGALG00000022739 82 0.845 - - - - - - - 0.845 - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
53. CLCA2 8 0.845 - - - - - - - 0.845 - - chloride channel accessory 2, transcript variant X1
54. RNF216 ENSGALG00000004629 84 0.844 - - - - - - 0.844 - - - ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]
55. DCLRE1B ENSGALG00000028626 48 0.844 - - - - - - 0.844 - - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
56. HECTD2 ENSGALG00000038043 177 0.844 - - - - - - 0.844 - - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
57. SHCBP1 ENSGALG00000004444 59 0.836 - - - - - - - 0.836 - - SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
58. TET2 ENSGALG00000010592 143 0.828 - - - - - - 0.828 - - - tet methylcytosine dioxygenase 2 [Source:NCBI gene;Acc:422540]
59. ARL8A_1 ENSGALG00000000606 23 0.826 - - - - - - - 0.826 - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
60. TNIP1 ENSGALG00000004496 355 0.825 - - - - - - 0.825 - - - TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]
61. EOMES ENSGALG00000027247 27 0.817 - - - - - - 0.817 - - - Gallus gallus eomesodermin (EOMES), mRNA. [Source:RefSeq mRNA;Acc:NM_001321555]
62. ICOS ENSGALG00000008656 27 0.816 - - - - - - 0.816 - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
63. AIG1 ENSGALG00000013780 27 0.816 - - - - - - 0.816 - - - androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:21607]
64. P2RX7 ENSGALG00000003863 7 0.816 - - - - - - 0.816 - - - purinergic receptor P2X 7 [Source:HGNC Symbol;Acc:HGNC:8537]
65. SNORA55 SNORA55 1 0.816 - - - - - - 0.816 - - -
66. ACSL6 ENSGALG00000006644 5 0.816 - - - - - - 0.816 - - - acyl-CoA synthetase long-chain family member 6, transcript variant X3
67. BANK1 ENSGALG00000012292 17 0.816 - - - - - - 0.816 - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
68. GLUL ENSGALG00000043754 71 0.816 - - - - - - 0.816 - - - glutamate-ammonia ligase [Source:NCBI gene;Acc:396489]
69. ZNF423 ENSGALG00000003891 103 0.816 - - - - - - 0.816 - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
70. VWA3B ENSGALG00000040709 5 0.816 - - - - - - 0.816 - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
71. GINS3 ENSGALG00000031209 32 0.816 - - - - - - 0.816 - - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
72. SERPINA1 SERPINA1 1 0.816 - - - - - - 0.816 - - -
73. C8H1ORF52 C8H1ORF52 118 0.816 - - - - - - 0.816 - - -
74. EEF2K ENSGALG00000006982 12 0.816 - - - - - - 0.816 - - - eukaryotic elongation factor 2 kinase [Source:HGNC Symbol;Acc:HGNC:24615]
75. UBASH3B ENSGALG00000006567 7 0.816 - - - - - - 0.816 - - - ubiquitin associated and SH3 domain containing B [Source:HGNC Symbol;Acc:HGNC:29884]
76. ENSGALG00000001763 ENSGALG00000001763 8 0.816 - - - - - - 0.816 - - -
77. PGAM1 ENSGALG00000007606 384 0.816 - - - - - - 0.816 - - - phosphoglycerate mutase 1 [Source:NCBI gene;Acc:428969]
78. PPEF1 ENSGALG00000016522 3 0.816 - - - - - - 0.816 - - - protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]
79. ENSGALG00000013079 ENSGALG00000013079 12 0.816 - - - - - - 0.816 - - -
80. DPY19L3 ENSGALG00000004559 40 0.816 - - - - - - 0.816 - - - dpy-19 like C-mannosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:27120]
81. KANSL1L ENSGALG00000002866 44 0.816 - - - - - - 0.816 - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
82. AKAP6 ENSGALG00000009995 77 0.816 - - - - - - 0.816 - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
83. GZMM ENSGALG00000015192 8 0.816 - - - - - - 0.816 - - - granzyme M
84. GNAO1 ENSGALG00000003163, ENSGALG00000035175 1 0.816 - - - - - - 0.816 - - - G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]
85. C4orf47 ENSGALG00000013287 44 0.816 - - - - - - 0.816 - - - chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
86. ATMIN ENSGALG00000040475 16 0.816 - - - - - - 0.816 - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
87. ARMC3 ENSGALG00000007864 6 0.816 - - - - - - 0.816 - - - armadillo repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:30964]
88. LOXHD1 ENSGALG00000037829 3 0.816 - - - - - - 0.816 - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
89. LRRC72 9 0.816 - - - - - - 0.816 - - - leucine rich repeat containing 72, transcript variant X4
90. ENTPD1 ENSGALG00000007078 5 0.816 - - - - - - 0.816 - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:NCBI gene;Acc:423826]
91. ANKRD27 ENSGALG00000004671 26 0.816 - - - - - - 0.816 - - - ankyrin repeat domain 27 [Source:NCBI gene;Acc:415766]
92. EXT2 ENSGALG00000031542 58 0.812 - - - - - - 0.812 - - - exostosin glycosyltransferase 2 [Source:NCBI gene;Acc:425859]
93. NPHS2 ENSGALG00000004163 850 0.811 - - - - - - - 0.811 - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
94. TMTC4 ENSGALG00000016870 40 0.811 - - - - - - - 0.811 - - transmembrane and tetratricopeptide repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25904]
95. PPP1R1C ENSGALG00000008896 378 0.811 - - - - - - - 0.811 - - protein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]
96. TRERF1 ENSGALG00000009896 42 0.804 - - - - - - - - - 0.804 transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
97. PLACL2 ENSGALG00000011190 222 0.804 - - - - - - - 0.804 - - Placenta-specific gene 8-like 2
98. SOS2 ENSGALG00000012273 41 0.801 - - - - - 0.801 - - - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
99. SLC22A7 ENSGALG00000001661 9 0.801 - - - - - 0.801 - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
100. MYOD1 ENSGALG00000006216 568 0.799 - - - - - - - 0.799 - - myogenic differentiation 1 [Source:NCBI gene;Acc:374048]

There are 61 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA