Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RDH10

Gene Name Gene ID Reads Annotation
RDH10 ENSGALG00000034346 15285 retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]











Genes with expression patterns similar to RDH10

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RDH10 ENSGALG00000034346 15285 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
2. LIX1 ENSGALG00000015290 7589 1.735 - - - - - 0.882 0.853 - - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
3. WT1 ENSGALG00000012115 3935 1.647 - - - - - - 0.840 - 0.807 - Wilms tumor 1 [Source:NCBI gene;Acc:101747322]
4. COL5A2 ENSGALG00000031112 18358 1.637 - - - - - 0.769 0.868 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
5. HLX ENSGALG00000037257 5834 1.608 - - - - - 0.896 0.712 - - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
6. BMP4 ENSGALG00000012429 4306 1.547 - - - - - 0.813 0.734 - - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
7. WNT5A ENSGALG00000034168 10160 1.538 - - - - - - 0.811 - - 0.727 Wnt family member 5A [Source:NCBI gene;Acc:395703]
8. KRT19 ENSGALG00000019719 38711 1.495 - 0.716 - - - 0.779 - - - - keratin 19 [Source:NCBI gene;Acc:395861]
9. COLEC10 ENSGALG00000033144 3436 1.485 - - - - - 0.713 - - - 0.772 collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
10. DCTD ENSGALG00000010674 8396 1.441 - - - - - - - 0.731 - 0.710 dCMP deaminase [Source:NCBI gene;Acc:422556]
11. LMO7 ENSGALG00000016920 3809 1.418 - - - - - 0.718 0.700 - - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
12. TCF21 ENSGALG00000029024 8252 0.897 - - - - - 0.897 - - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
13. HAND1 ENSGALG00000035104 2351 0.883 - - - - - 0.883 - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
14. SLC28A3 ENSGALG00000012593 131 0.882 - - - - - - - - 0.882 - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
15. OSR1 ENSGALG00000016473 1202 0.859 - - - - - - 0.859 - - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
16. HAPLN1 ENSGALG00000015627 14942 0.858 - - - - - - 0.858 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
17. TUBB6 ENSGALG00000031275 17690 0.857 - - - - - - 0.857 - - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
18. TCF7L2 ENSGALG00000008883 13688 0.842 - - - - - 0.842 - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
19. GPR20 ENSGALG00000041730 1926 0.84 - - - - - - - - - 0.840 G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
20. ENSGALG00000028422 ENSGALG00000028422 1504 0.832 - - - - - - 0.832 - - -
21. ITGB1 ENSGALG00000007145 19551 0.829 - - - - - - 0.829 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
22. RELL1 ENSGALG00000014336 2950 0.828 - - - - - - 0.828 - - - RELT like 1 [Source:NCBI gene;Acc:422795]
23. GPC3 ENSGALG00000006087 3744 0.827 - - - - - 0.827 - - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
24. ID2 ENSGALG00000035016 22120 0.826 - - - - - 0.826 - - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
25. SNAI2 ENSGALG00000030902 8201 0.822 - - - - - - 0.822 - - - snail family transcriptional repressor 2
26. EGFL7 ENSGALG00000043499 6272 0.817 - - - - - - 0.817 - - - EGF like domain multiple 7 [Source:NCBI gene;Acc:417137]
27. BAMBI ENSGALG00000040993 7562 0.811 - - - - - 0.811 - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
28. SOX18 ENSGALG00000034118 5453 0.809 - - - - - - 0.809 - - - SRY-box 18 [Source:NCBI gene;Acc:374200]
29. GGA.1330 GGA.1330 11281 0.809 - - - - - - 0.809 - - -
30. EHD3 ENSGALG00000009086 14407 0.807 - - - - - - 0.807 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
31. PALLD ENSGALG00000009650 10803 0.803 - - - - - 0.803 - - - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]
32. TGFBI ENSGALG00000029429 2306 0.8 - - - - - - 0.800 - - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
33. MDK ENSGALG00000008367 316136 0.798 - - - - - 0.798 - - - - midkine [Source:NCBI gene;Acc:423196]
34. ANXA1 ENSGALG00000015148 13804 0.795 - - - - - - 0.795 - - - annexin A1 [Source:NCBI gene;Acc:404271]
35. ANO1 ENSGALG00000041808 5149 0.794 - - - - - - - - - 0.794 anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
36. UMPS ENSGALG00000011770 11331 0.792 - - - - - - 0.792 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
37. PPDPF ENSGALG00000005849 16711 0.788 - - - - - - 0.788 - - - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
38. KIF26A ENSGALG00000011581 11285 0.785 - - - - - 0.785 - - - - kinesin family member 26A [Source:HGNC Symbol;Acc:HGNC:20226]
39. LCP1 ENSGALG00000016986 801 0.782 - - - - - - - - 0.782 - lymphocyte cytosolic protein 1 [Source:NCBI gene;Acc:418852]
40. FARP1 ENSGALG00000016886 13132 0.779 - - - - - - 0.779 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
41. TSPAN8 ENSGALG00000010152 2666 0.778 - - - - - - 0.778 - - - tetraspanin 8 [Source:NCBI gene;Acc:417854]
42. PHLDB2 ENSGALG00000015377 8560 0.776 - - - - - - 0.776 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
43. HNF1B ENSGALG00000005504 1146 0.775 - - - - - - 0.775 - - - HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
44. PGO2 PGO2 589 0.775 - - - - - 0.775 - - - -
45. C-MET C-MET 1650 0.775 - - - - - - - - 0.775 -
46. ACTN1 ENSGALG00000042458 10477 0.775 - - - - - - 0.775 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
47. LEPREL4 LEPREL4 5609 0.775 - - - - - - 0.775 - - -
48. FRMD4B ENSGALG00000037791 2457 0.774 - - - - - - 0.774 - - - FERM domain containing 4B [Source:HGNC Symbol;Acc:HGNC:24886]
49. MYO1B ENSGALG00000007712 8755 0.773 - - - - - - 0.773 - - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
50. PARP16 ENSGALG00000007365 9467 0.771 - - - - - 0.771 - - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
51. EMILIN2 ENSGALG00000032997 2460 0.768 - - - - - - 0.768 - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
52. TGFBR3 ENSGALG00000006038 2951 0.763 - - - - - - - - - 0.763 transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
53. JUN ENSGALG00000010870 2764 0.763 - - - - - - 0.763 - - - Jun proto-oncogene, AP-1 transcription factor subunit [Source:NCBI gene;Acc:424673]
54. SPRY2 ENSGALG00000016906 760 0.762 - - - - - - - 0.762 - - sprouty RTK signaling antagonist 2 [Source:NCBI gene;Acc:395584]
55. CSTB ENSGALG00000014410 7346 0.761 - - - - - - 0.761 - - - cystatin B [Source:NCBI gene;Acc:418267]
56. PCP4 ENSGALG00000022819 880 0.761 - - - - - - - - 0.761 - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
57. ADAMTS19 ENSGALG00000000151 3217 0.761 - - - - - 0.761 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 19 [Source:HGNC Symbol;Acc:HGNC:17111]
58. INTS1 ENSGALG00000004104 950 0.76 - - - - - - - - - 0.760 integrator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24555]
59. HBG1 HBG1 468163 0.76 - - - - - - - - 0.760 -
60. KIAA1551 ENSGALG00000045168 3435 0.759 - - - - - - 0.759 - - - KIAA1551, transcript variant X1
61. LIMCH1 ENSGALG00000014258 1987 0.759 - - - - - - - - - 0.759 LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
62. VEGFC ENSGALG00000010847 2197 0.758 - - - - - - 0.758 - - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
63. STRA6 ENSGALG00000001449 8248 0.757 - - - - - - 0.757 - - - stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
64. NAV2 ENSGALG00000003999 6587 0.757 - - - - - 0.757 - - - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
65. CALML4 ENSGALG00000007979 6395 0.756 - - - - - - 0.756 - - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
66. RGN ENSGALG00000016724 3184 0.755 - - - - - - 0.755 - - - regucalcin [Source:NCBI gene;Acc:395480]
67. ZBTB7C ENSGALG00000033408 711 0.753 - - - - - - - - 0.753 - zinc finger and BTB domain containing 7C [Source:HGNC Symbol;Acc:HGNC:31700]
68. TRAPPC3 ENSGALG00000002284 23302 0.752 - - - - - - - 0.752 - - trafficking protein particle complex 3 [Source:NCBI gene;Acc:419625]
69. FYTTD1 ENSGALG00000007581 9341 0.751 - - - - - - 0.751 - - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
70. SPCS3 ENSGALG00000010839 19106 0.751 - - - - - - 0.751 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
71. PKDCC ENSGALG00000042511 3378 0.751 - - - - - - 0.751 - - - protein kinase domain containing, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:25123]
72. RUNX1T1 ENSGALG00000033091 17529 0.75 - - - - - 0.750 - - - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
73. PRCP ENSGALG00000037521 4012 0.748 - - - - - 0.748 - - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
74. ESRP2 ENSGALG00000003374 4436 0.748 - - - - - - 0.748 - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
75. KIAA0355 ENSGALG00000004949 4352 0.748 - - - - - - 0.748 - - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
76. RBPMS ENSGALG00000010291 3663 0.748 - - - - - - 0.748 - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
77. PTPRQ ENSGALG00000010935 626 0.747 - - - - - - - - 0.747 - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
78. ATF3 ENSGALG00000025887 814 0.747 - - - - - - - - 0.747 - activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]
79. NPHS2 ENSGALG00000004163 850 0.746 - - - - - - - - 0.746 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
80. RPAP3 ENSGALG00000009743 3380 0.746 - - - - - - 0.746 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
81. SKAP2 ENSGALG00000030081 13746 0.744 - - - - - - 0.744 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
82. PRNP ENSGALG00000000209 2159 0.743 - - - - - - - - 0.743 - prion protein [Source:NCBI gene;Acc:396452]
83. TRAF7 ENSGALG00000005767 4615 0.741 - - - - - - 0.741 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
84. PGM5 ENSGALG00000014995 1238 0.739 - - - - - - 0.739 - - - phosphoglucomutase 5 [Source:HGNC Symbol;Acc:HGNC:8908]
85. FKBP7 ENSGALG00000009149 6742 0.738 - - - - - - 0.738 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
86. PSMB2 ENSGALG00000026421 51885 0.738 - - - - - - 0.738 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
87. BCL11A ENSGALG00000034048 4111 0.738 - - - - - 0.738 - - - - B cell CLL/lymphoma 11A [Source:NCBI gene;Acc:421199]
88. SRMS ENSGALG00000005852 174 0.738 - - - - - - - - 0.738 - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
89. MGAT4B ENSGALG00000005924 2663 0.738 - - - - - - 0.738 - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
90. DCDC2 ENSGALG00000042454 2306 0.736 - - - - - - 0.736 - - - doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
91. PAPD4 1496 0.736 - - - - - - 0.736 - - - poly(A) RNA polymerase D4, non-canonical, transcript variant X5
92. PLTP ENSGALG00000036686 79 0.735 - - - - - - - - 0.735 - phospholipid transfer protein [Source:NCBI gene;Acc:428164]
93. KDELR2 ENSGALG00000040793 29669 0.735 - - - - - 0.735 - - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
94. MYLK ENSGALG00000011708 10434 0.735 - - - - - - - - - 0.735 Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
95. BRP44 BRP44 17093 0.734 - - - - - - 0.734 - - -
96. CXCL12 ENSGALG00000041346 4128 0.733 - - - - - - - - - 0.733 C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
97. GLCCI1 ENSGALG00000035239 22149 0.733 - - - - - 0.733 - - - - glucocorticoid induced 1 [Source:NCBI gene;Acc:420580]
98. MGST3 ENSGALG00000003445 50408 0.732 - - - - - 0.732 - - - - microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
99. ENPP1 ENSGALG00000034397 278 0.732 - - - - - - - - - 0.732 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:3356]
100. AKR1D1 ENSGALG00000012834 15183 0.731 - - - - - - - - - 0.731 aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]

There are 53 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA