Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RD3L

Gene Name Gene ID Reads Annotation
RD3L ENSGALG00000027643 42 retinal degeneration 3 like [Source:HGNC Symbol;Acc:HGNC:40912]











Genes with expression patterns similar to RD3L

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RD3L ENSGALG00000027643 42 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 retinal degeneration 3 like [Source:HGNC Symbol;Acc:HGNC:40912]
2. TMEM161B ENSGALG00000010896 36 1.661 - - - 0.815 - - 0.846 - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
3. LRRK1 LRRK1 35 1.563 - - - 0.841 - - - 0.722 - -
4. PPHLN1 ENSGALG00000009547 30 1 - - - - - - 1.000 - - - periphilin 1 [Source:NCBI gene;Acc:417792]
5. LICOS LICOS 13 1 - - - - - - 1.000 - - -
6. OSTN ENSGALG00000007226 33 1 - - - - - - 1.000 - - - osteocrin [Source:NCBI gene;Acc:424907]
7. NLRX1 ENSGALG00000044053 50 1 - - - - - - 1.000 - - - NLR family member X1 [Source:HGNC Symbol;Acc:HGNC:29890]
8. SLC25A42 ENSGALG00000002621 6 1 - - - - - - 1.000 - - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
9. RBP1 ENSGALG00000037875 7 1 - - - - - - 1.000 - - - retinol binding protein 1 [Source:NCBI gene;Acc:424821]
10. CPXM2 ENSGALG00000009693 23 1 - - - - - - 1.000 - - - carboxypeptidase X, M14 family member 2 [Source:HGNC Symbol;Acc:HGNC:26977]
11. TMEM189 ENSGALG00000026906 14 1 - - - - - - 1.000 - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
12. C18orf32 ENSGALG00000042000 114 1 - - - - - - 1.000 - - - chromosome 18 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:31690]
13. TNFRSF19 ENSGALG00000017119 25 1 - - - - - - 1.000 - - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
14. ENSGALG00000027143 ENSGALG00000027143 23 1 - - - - - - 1.000 - - -
15. KCNQ2 ENSGALG00000005822 3 1 - - - - - - 1.000 - - - potassium voltage-gated channel subfamily Q member 2 [Source:HGNC Symbol;Acc:HGNC:6296]
16. ENSGALG00000004501 ENSGALG00000004501 46 1 - - - - - - 1.000 - - -
17. FAM237A ENSGALG00000020836 21 1 - - - - - - 1.000 - - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
18. THAP1 ENSGALG00000015385 15 1 - - - - - - 1.000 - - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
19. HSD11B1a ENSGALG00000028858 40 1 - - - - - - 1.000 - - - hydroxysteroid (11-beta) dehydrogenase 1a, transcript variant X1
20. ENSGALG00000005148 ENSGALG00000005148 9 0.982 - - - - - - - 0.982 - -
21. RASGRF2 ENSGALG00000015598 30 0.954 - - - - - - 0.954 - - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
22. SNX22 34 0.933 - - - - - - 0.933 - - - sorting nexin 22
23. POMT1 ENSGALG00000003757 38 0.933 - - - - - - 0.933 - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
24. GNPDA1 ENSGALG00000040594 13 0.92 - - - - - - 0.920 - - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
25. PPFIBP2 ENSGALG00000005294 133 0.92 - - - - - - 0.920 - - - PPFIA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9250]
26. TEX2L ENSGALG00000005421 52 0.916 - - - - - - - 0.916 - - testis expressed 2-like, transcript variant X1
27. IL15 ENSGALG00000009870 3 0.879 - - - - - - 0.879 - - - interleukin 15 [Source:NCBI gene;Acc:395258]
28. TMEM82 16 0.869 - - - 0.869 - - - - - - transmembrane protein 82, transcript variant X2
29. GNA12 ENSGALG00000004368 692 0.867 - - - - - - 0.867 - - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
30. TMEFF2 ENSGALG00000007759 93 0.86 - - - 0.860 - - - - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
31. CL2 ENSGALG00000011455 87 0.858 - - - 0.858 - - - - - - liver ribonuclease A [Source:NCBI gene;Acc:422633]
32. ENSGALG00000023485 ENSGALG00000023485 46 0.858 - - - 0.858 - - - - - -
33. CD83 ENSGALG00000046032 56 0.856 - - - 0.856 - - - - - - CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]
34. CLDN12 ENSGALG00000009038 16 0.856 - - - 0.856 - - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
35. MASP1 ENSGALG00000007419 141 0.855 - - - 0.855 - - - - - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
36. ODZ1 ODZ1 124 0.855 - - - - - - 0.855 - - -
37. ENSGALG00000004223 ENSGALG00000004223 7 0.855 - - - - - - 0.855 - - -
38. DDAH1 ENSGALG00000008663 8 0.853 - - - 0.853 - - - - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
39. SLC18A2 ENSGALG00000009289 11 0.853 - - - 0.853 - - - - - - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
40. PNMT ENSGALG00000027281 14 0.853 - - - 0.853 - - - - - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
41. CRLF2 ENSGALG00000045814 7 0.853 - - - 0.853 - - - - - - cytokine receptor-like factor 2
42. MTHFD2L ENSGALG00000010855 14 0.85 - - - 0.850 - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
43. ENSGALG00000004050 ENSGALG00000004050 9 0.848 - - - 0.848 - - - - - -
44. BNC1 ENSGALG00000006041 63 0.846 - - - - - - 0.846 - - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
45. LAPTM5 ENSGALG00000038636 18 0.846 - - - - - - 0.846 - - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
46. A1CF ENSGALG00000003765 36 0.846 - - - 0.846 - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
47. SNORA19 SNORA19 70 0.845 - - - 0.845 - - - - - -
48. SIGIRR ENSGALG00000004267 72 0.843 - - - 0.843 - - - - - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]
49. XYLB ENSGALG00000006173 23 0.843 - - - 0.843 - - - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
50. CPM ENSGALG00000009945 140 0.841 - - - 0.841 - - - - - - carboxypeptidase M [Source:NCBI gene;Acc:417843]
51. ENSGALG00000018733 ENSGALG00000018733 175 0.84 - - - 0.840 - - - - - -
52. MGAT4D ENSGALG00000009830 23 0.839 - - - 0.839 - - - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
53. CSNK1A1 495 0.838 - - - - - - - 0.838 - - casein kinase 1 alpha 1, transcript variant X4
54. STC2 ENSGALG00000002893 2119 0.835 - - - 0.835 - - - - - - stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]
55. FGF16 ENSGALG00000007806 8 0.834 - - - - - - 0.834 - - - fibroblast growth factor 16 [Source:NCBI gene;Acc:422330]
56. NTS ENSGALG00000027192 669 0.834 - - - 0.834 - - - - - - neurotensin [Source:NCBI gene;Acc:417883]
57. TBC1D8B ENSGALG00000009040 75 0.834 - - - - - - 0.834 - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
58. SLC24A2 ENSGALG00000015080 54 0.833 - - - 0.833 - - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
59. TJP3 ENSGALG00000000748 45 0.831 - - - 0.831 - - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
60. TMEM196 ENSGALG00000010865 239 0.829 - - - 0.829 - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
61. MANBA ENSGALG00000012308 84 0.824 - - - 0.824 - - - - - - mannosidase beta [Source:HGNC Symbol;Acc:HGNC:6831]
62. ZC2HC1A ENSGALG00000035932 17 0.823 - - - - - - - - - 0.823 zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
63. TRIM29 ENSGALG00000042360 34 0.823 - - - - - - - - - 0.823 tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
64. RRAD ENSGALG00000005140 183 0.822 - - - 0.822 - - - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
65. AHNAK2 58 0.821 - - - 0.821 - - - - - - AHNAK nucleoprotein 2, transcript variant X2
66. C1QTNF2 ENSGALG00000027232 42 0.819 - - - - - - 0.819 - - - C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
67. UGT1A1 ENSGALG00000004196 30 0.818 - - - 0.818 - - - - - - UDP glucuronosyltransferase family 1 member A1, transcript variant X1
68. LY75 ENSGALG00000011153 76 0.816 - - - - - - 0.816 - - - lymphocyte antigen 75 [Source:NCBI gene;Acc:424192]
69. SYK ENSGALG00000015216 62 0.815 - - - 0.815 - - - - - - spleen associated tyrosine kinase [Source:NCBI gene;Acc:427272]
70. KBTBD8 ENSGALG00000007569 20 0.808 - - - 0.808 - - - - - - kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
71. CYTH3 ENSGALG00000007149 10 0.808 - - - - - - - - - 0.808 cytohesin 3, transcript variant X2
72. ENSGALG00000028778 ENSGALG00000028778 47 0.806 - - - 0.806 - - - - - -
73. BMP-10 BMP-10 22 0.804 - - - 0.804 - - - - - -
74. C1orf168 C1orf168 98 0.803 - - - 0.803 - - - - - -
75. C22H2ORF42 ENSGALG00000013881 259 0.803 - - - 0.803 - - - - - - chromosome 22 open reading frame, human C2orf42 [Source:NCBI gene;Acc:426298]
76. TLDC2 ENSGALG00000029033 6 0.801 - - - - - - 0.801 - - - TBC/LysM-associated domain containing 2, transcript variant X2
77. MALL ENSGALG00000023882 241 0.8 - - - 0.800 - - - - - - mal, T-cell differentiation protein like [Source:NCBI gene;Acc:421222]
78. GJA4 ENSGALG00000002532 555 0.798 - - - 0.798 - - - - - - gap junction protein alpha 4 [Source:NCBI gene;Acc:404529]
79. REPS1 ENSGALG00000013829 2271 0.798 - - - 0.798 - - - - - - RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
80. TLR5 ENSGALG00000009392 28 0.796 - - - - - - 0.796 - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
81. KATNAL1 ENSGALG00000017083 117 0.793 - - - 0.793 - - - - - - katanin catalytic subunit A1 like 1 [Source:HGNC Symbol;Acc:HGNC:28361]
82. NRG3 ENSGALG00000042812 10 0.792 - - - - - - 0.792 - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
83. MTHFD1L ENSGALG00000012412 35 0.791 - - - 0.791 - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:HGNC Symbol;Acc:HGNC:21055]
84. BMP2 ENSGALG00000029301 379 0.791 - - - 0.791 - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
85. GUCD1 ENSGALG00000006607 32 0.79 - - - 0.790 - - - - - - guanylyl cyclase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14237]
86. WFDC2 ENSGALG00000031164 37 0.788 - - - 0.788 - - - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
87. SCN5A ENSGALG00000006112 137 0.788 - - - 0.788 - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
88. MALSU1 ENSGALG00000010954 51 0.786 - - - 0.786 - - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
89. SPATA6 ENSGALG00000010502 16 0.783 - - - - - - 0.783 - - - spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]
90. CELA2A ENSGALG00000004568 10 0.783 - - - - - - 0.783 - - - chymotrypsin like elastase family member 2A [Source:NCBI gene;Acc:419486]
91. SCNN1A ENSGALG00000040424 61 0.781 - - - 0.781 - - - - - - sodium channel epithelial 1 alpha subunit [Source:NCBI gene;Acc:396050]
92. PERP PERP 734 0.78 - - - 0.780 - - - - - -
93. TRIM14 ENSGALG00000015315 22 0.78 - - - - - - 0.780 - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
94. UBE2A ENSGALG00000008648 174 0.78 - - - - - - 0.780 - - - ubiquitin conjugating enzyme E2 A [Source:NCBI gene;Acc:395672]
95. TMEM231 ENSGALG00000003219 53 0.778 - - - 0.778 - - - - - - transmembrane protein 231 [Source:NCBI gene;Acc:425108]
96. HYAL3 ENSGALG00000029000 712 0.774 - - - 0.774 - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
97. ENSGALG00000023180 ENSGALG00000023180 83 0.773 - - - 0.773 - - - - - -
98. ENSGALG00000009344 ENSGALG00000009344 330 0.773 - - - 0.773 - - - - - -
99. LOC770996 ENSGALG00000016570 635 0.772 - - - 0.772 - - - - - - L-gulonolactone oxidase-like
100. C1QB ENSGALG00000004771 368 0.771 - - - - - - - - - 0.771 complement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA