Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RD3

Gene Name Gene ID Reads Annotation
RD3 ENSGALG00000009861 2 retinal degeneration 3, GUCY2D regulator [Source:HGNC Symbol;Acc:HGNC:19689]











Genes with expression patterns similar to RD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RD3 ENSGALG00000009861 2 2 - - - - 1.000 - - - - 1.000 retinal degeneration 3, GUCY2D regulator [Source:HGNC Symbol;Acc:HGNC:19689]
2. SLC17A6 ENSGALG00000039254 16 1.704 - - - - 0.898 - - - - 0.806 solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
3. ROBO3 ENSGALG00000045816 1 1 - - - - - - - - - 1.000 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
4. AQP9 ENSGALG00000004261 4 1 - - - - - - - - - 1.000 aquaporin 9 [Source:NCBI gene;Acc:415402]
5. LRRC52 ENSGALG00000003443 20 1 - - - - - - - - - 1.000 leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
6. SEMA5A_1 ENSGALG00000028685 4 1 - - - - - - - - - 1.000 semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]
7. FAM154A FAM154A 1 1 - - - - - - - - - 1.000
8. NOL4_1 ENSGALG00000015198 3 1 - - - - - - - - - 1.000 nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]
9. SYT10 ENSGALG00000012911 17 1 - - - - - - - - - 1.000 synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
10. NEU4 ENSGALG00000006361 1 1 - - - - - - - - - 1.000 neuraminidase 4 [Source:HGNC Symbol;Acc:HGNC:21328]
11. CMTM4 ENSGALG00000005251 5 1 - - - - 1.000 - - - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
12. RNF157 ENSGALG00000002008 1 1 - - - - 1.000 - - - - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
13. ATP6V1AL ENSGALG00000000048 21 1 - - - - - - - - - 1.000 ATPase H+ transporting V1 subunit A-like, transcript variant X2
14. ENSGALG00000023934 ENSGALG00000023934 3 1 - - - - - - - - - 1.000
15. C9orf152 C9orf152 3 1 - - - - - - - - - 1.000
16. SALL3 ENSGALG00000041404 29 1 - - - - 1.000 - - - - - spalt like transcription factor 3 [Source:NCBI gene;Acc:395359]
17. ABCC3 ENSGALG00000007522 340 1 - - - - 1.000 - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
18. GPR78 ENSGALG00000015595 3 1 - - - - - - - - - 1.000 G protein-coupled receptor 78
19. TOPAZ1 18 1 - - - - - - - - - 1.000 testis and ovary specific PAZ domain containing 1, transcript variant X6
20. SASH1 ENSGALG00000012342 28 1 - - - - 1.000 - - - - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
21. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - - 1.000 - - - - -
22. JDP2 ENSGALG00000010322 11 1 - - - - 1.000 - - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
23. SNX8 ENSGALG00000004255 4 1 - - - - 1.000 - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
24. ENSGALG00000009123 ENSGALG00000009123 9 1 - - - - - - - - - 1.000
25. FOXP4 ENSGALG00000033497 13 1 - - - - 1.000 - - - - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
26. C3H6ORF138 C3H6ORF138 2 1 - - - - - - - - - 1.000
27. ENSGALG00000021318 ENSGALG00000021318 1 1 - - - - - - - - - 1.000
28. ZFYVE26 ENSGALG00000028762 18 1 - - - - 1.000 - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
29. GCNT4 ENSGALG00000014944 1 1 - - - - - - - - - 1.000 glucosaminyl (N-acetyl) transferase 4, core 2 [Source:HGNC Symbol;Acc:HGNC:17973]
30. CRYBG3 7 0.992 - - - - - - - - - 0.992 crystallin beta-gamma domain containing 3, transcript variant X2
31. CAMKK1 ENSGALG00000001617 64 0.962 - - - - - - - - - 0.962 calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
32. AUTS2 ENSGALG00000001153 24 0.961 - - - - - - - - - 0.961 AUTS2, activator of transcription and developmental regulator [Source:HGNC Symbol;Acc:HGNC:14262]
33. SNORD94 SNORD94 10 0.95 - - - - - - - - - 0.950
34. CHRNA3 ENSGALG00000003014 6 0.931 - - - - - - - - - 0.931 cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
35. TDRD1 ENSGALG00000046180 612 0.931 - - - - - - - - - 0.931 tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
36. FAM73B FAM73B 2 0.931 - - - - - - - - - 0.931
37. ENSGALG00000004692 ENSGALG00000004692 59 0.917 - - - - - - - - - 0.917
38. IL12RB1 28 0.892 - - - - - - - - - 0.892 interleukin 12 receptor subunit beta 1, transcript variant X4
39. WEE1 ENSGALG00000005769 294 0.874 - - - - - - - - - 0.874 WEE1 G2 checkpoint kinase [Source:NCBI gene;Acc:423045]
40. MOCOS ENSGALG00000013149 25 0.863 - - - - 0.863 - - - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
41. IMPG1 ENSGALG00000015897 4 0.863 - - - - 0.863 - - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
42. XK ENSGALG00000016262 60 0.836 - - - - - - - - - 0.836 X-linked Kx blood group [Source:NCBI gene;Acc:427991]
43. OTOP1 ENSGALG00000030356 95 0.823 - - - - - - - - - 0.823 otopetrin 1 [Source:HGNC Symbol;Acc:HGNC:19656]
44. CABP1 ENSGALG00000007116 54 0.819 - - - - - - - - - 0.819 calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1384]
45. TRAPPC3L ENSGALG00000028539 19 0.813 - - - - - - - - - 0.813 trafficking protein particle complex 3 like [Source:HGNC Symbol;Acc:HGNC:21090]
46. ENSGALG00000020194 ENSGALG00000020194 22 0.81 - - - - - - - - - 0.810
47. GLT8D2 ENSGALG00000034078 11 0.805 - - - - - - - - - 0.805 glycosyltransferase 8 domain containing 2 [Source:NCBI gene;Acc:418085]
48. CYGB ENSGALG00000001892 3 0.805 - - - - - - - - - 0.805 cytoglobin [Source:NCBI gene;Acc:427802]
49. gga-mir-2954 ENSGALG00000026107 462 0.805 - - - - - - - - - 0.805 gga-mir-2954 [Source:miRBase;Acc:MI0013634]
50. RHBDL3 ENSGALG00000003426 19 0.794 - - - - 0.794 - - - - - rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
51. PAK7 PAK7 136 0.793 - - - - - - - - - 0.793
52. GNRH1 9 0.784 - - - - 0.784 - - - - - gonadotropin releasing hormone 1
53. DTNA ENSGALG00000015211 148 0.779 - - - - - - - - - 0.779 dystrobrevin alpha [Source:HGNC Symbol;Acc:HGNC:3057]
54. HMX2 ENSGALG00000030875 10 0.773 - - - - - - - - - 0.773 H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
55. EDRF1 26 0.768 - - - - 0.768 - - - - - erythroid differentiation regulatory factor 1
56. ZHX3 ENSGALG00000039155 5 0.768 - - - - 0.768 - - - - - zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
57. TMEM154 ENSGALG00000023355 19 0.763 - - - - - - - - - 0.763 transmembrane protein 154 [Source:HGNC Symbol;Acc:HGNC:26489]
58. SLC13A5 ENSGALG00000005995 23 0.76 - - - - - - - - - 0.760 solute carrier family 13 member 5 [Source:HGNC Symbol;Acc:HGNC:23089]
59. UBE3D ENSGALG00000015860 6 0.755 - - - - - - - - - 0.755 ubiquitin protein ligase E3D [Source:HGNC Symbol;Acc:HGNC:21381]
60. CHAC2 ENSGALG00000008182 15 0.741 - - - - - - - - - 0.741 ChaC cation transport regulator homolog 2 [Source:NCBI gene;Acc:421221]
61. DLG2 56 0.737 - - - - - - - - - 0.737 discs large MAGUK scaffold protein 2, transcript variant X24
62. CRHBP ENSGALG00000014994 8 0.736 - - - - 0.736 - - - - - corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
63. ENSGALG00000023638 ENSGALG00000023638 16 0.727 - - - - - - - - - 0.727
64. GRID2 ENSGALG00000010397 6 0.708 - - - - - - - - - 0.708 glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
65. SGMS2 ENSGALG00000010535 42 0.706 - - - - - - - - - 0.706 sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
66. EPN3 ENSGALG00000023279 10 0.705 - - - - - - - - - 0.705 epsin 3 [Source:HGNC Symbol;Acc:HGNC:18235]
67. C1QTNF4 ENSGALG00000008080 3 0.703 - - - - - - - - - 0.703 C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
68. VPS29L ENSGALG00000005951 31 0.703 - - - - - - - - - 0.703 VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
69. gga-mir-1713 ENSGALG00000025481 2 0.703 - - - - - - - - - 0.703 gga-mir-1713 [Source:miRBase;Acc:MI0007450]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA