Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RCSD1

Gene Name Gene ID Reads Annotation
RCSD1 ENSGALG00000040275 6581 RCSD domain containing 1 [Source:NCBI gene;Acc:418443]











Genes with expression patterns similar to RCSD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RCSD1 ENSGALG00000040275 6581 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RCSD domain containing 1 [Source:NCBI gene;Acc:418443]
2. CENPE ENSGALG00000013208 12337 1.493 - - 0.749 - - - - 0.744 - - centromere protein E, transcript variant X4
3. ITGB1 ENSGALG00000007145 19551 1.408 - - 0.705 - - - 0.703 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
4. GMPS ENSGALG00000010284 8765 0.859 - - - - - - - 0.859 - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
5. ENSGALG00000016380 ENSGALG00000016380 2784 0.815 - - - - - - 0.815 - - -
6. TCN2 3959 0.807 - - 0.807 - - - - - - - transcobalamin 2
7. BAIAP2 ENSGALG00000042538 1365 0.805 - - - - - - - 0.805 - - BAI1 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:947]
8. GPR125 GPR125 2753 0.801 - - - - - - - 0.801 - -
9. DUSP7 ENSGALG00000041650 1946 0.801 - - - - - - - 0.801 - - Gallus gallus dual specificity phosphatase 7 (DUSP7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318409]
10. FAM193A ENSGALG00000015667 3075 0.799 - - - - - - - 0.799 - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
11. MED28 ENSGALG00000007138 7686 0.799 - - - - - - - 0.799 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
12. YWHAQ ENSGALG00000016433 3450 0.798 - - - - - - - 0.798 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
13. RBM26 ENSGALG00000016910 13769 0.798 - - - - - - - 0.798 - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
14. KIAA2026 ENSGALG00000015050 4659 0.797 - - - - - - - 0.797 - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
15. MYO1B ENSGALG00000007712 8755 0.787 - - - - - - 0.787 - - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
16. HSPB7L ENSGALG00000028183 795 0.787 0.787 - - - - - - - - - heat shock protein beta-7-like
17. SPARC ENSGALG00000004184 36410 0.785 - - - - - - 0.785 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
18. RASL11B ENSGALG00000013948 201 0.785 - - - - - 0.785 - - - - RAS like family 11 member B [Source:HGNC Symbol;Acc:HGNC:23804]
19. FZD4 ENSGALG00000017242 2121 0.784 - - - - - - - - 0.784 - frizzled class receptor 4 [Source:NCBI gene;Acc:373887]
20. TRIM55 ENSGALG00000041327 1097 0.784 0.784 - - - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
21. MYL2 ENSGALG00000004582 2245 0.783 0.783 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
22. TPM4 ENSGALG00000002563 15621 0.783 0.783 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
23. MYBPC3 ENSGALG00000008148 315 0.782 0.782 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
24. CLPX ENSGALG00000007289 6348 0.782 - - - - - - - 0.782 - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
25. LASP-2 LASP-2 4415 0.773 0.773 - - - - - - - - -
26. ACTC1 ENSGALG00000009844 20914 0.772 0.772 - - - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
27. FARP1 ENSGALG00000016886 13132 0.769 - - - - - - 0.769 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
28. PDCD7 ENSGALG00000021027 3807 0.769 - - - - - - 0.769 - - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
29. MYL3 ENSGALG00000005448 3379 0.768 0.768 - - - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
30. TNNC1 ENSGALG00000001459 7110 0.767 0.767 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
31. FKBP10 ENSGALG00000025764 7668 0.766 - - - - - - 0.766 - - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
32. MRPS10 ENSGALG00000009890 9157 0.762 - - - - - 0.762 - - - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
33. ACTN2 ENSGALG00000014463 1724 0.761 0.761 - - - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
34. TNNT2 ENSGALG00000000302 568 0.757 0.757 - - - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
35. TTR ENSGALG00000015143 9764 0.757 - - - - - 0.757 - - - - transthyretin [Source:NCBI gene;Acc:396277]
36. RBM24 ENSGALG00000012712 4138 0.753 0.753 - - - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
37. TECRL ENSGALG00000038771 126 0.752 0.752 - - - - - - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
38. RBPMS ENSGALG00000010291 3663 0.752 0.752 - - - - - - - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
39. URM1 ENSGALG00000004971 17880 0.749 - - - - - 0.749 - - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
40. COL5A2 ENSGALG00000031112 18358 0.748 - - - - - - 0.748 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
41. BVES ENSGALG00000015410 435 0.748 0.748 - - - - - - - - - blood vessel epicardial substance [Source:NCBI gene;Acc:408032]
42. CCNG1 ENSGALG00000001718 9873 0.747 - - - - - - - 0.747 - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
43. UNC45B ENSGALG00000002186 399 0.744 0.744 - - - - - - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
44. TEAD4 ENSGALG00000014342 6123 0.744 - - - - - 0.744 - - - - Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
45. SNX17 ENSGALG00000032468 13519 0.743 - - - - - - - 0.743 - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
46. CHD7 ENSGALG00000041080 10201 0.737 - - - - - - - 0.737 - - chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]
47. EF1A EF1A 2378 0.736 0.736 - - - - - - - - -
48. gga-mir-7474 ENSGALG00000033766 5727 0.735 0.735 - - - - - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
49. NAA30 ENSGALG00000012098 4681 0.735 - - - - - - 0.735 - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
50. TUBB6 ENSGALG00000031275 17690 0.735 - - - - - - - - 0.735 - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
51. RAMP3 ENSGALG00000037246 1187 0.735 - - - - - - - - 0.735 - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
52. MGST2 ENSGALG00000009803 427 0.735 - - - - - 0.735 - - - - microsomal glutathione S-transferase 2 [Source:HGNC Symbol;Acc:HGNC:7063]
53. WT1 ENSGALG00000012115 3935 0.734 - - - - - - - - 0.734 - Wilms tumor 1 [Source:NCBI gene;Acc:101747322]
54. AKAP17A ENSGALG00000016686 2469 0.733 - - - - - - - 0.733 - - A-kinase anchoring protein 17A [Source:NCBI gene;Acc:418664]
55. ITM2A ENSGALG00000004107 29262 0.733 - - - - - - - - 0.733 - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
56. EMC3 ENSGALG00000003738 10363 0.732 - - - - - 0.732 - - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
57. SLC16A10 ENSGALG00000015040 1236 0.732 - - - - - - 0.732 - - - Gallus gallus solute carrier family 16 member 10 (SLC16A10), mRNA. [Source:RefSeq mRNA;Acc:NM_001321736]
58. ATP6V0A2 ENSGALG00000003194 4824 0.731 - - - - - - 0.731 - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
59. GEM ENSGALG00000032506 439 0.73 - - - - - 0.730 - - - - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
60. ANG-1 ANG-1 5239 0.73 0.730 - - - - - - - - -
61. CCDC141 ENSGALG00000020788 606 0.73 0.730 - - - - - - - - - coiled-coil domain containing 141, transcript variant X5
62. CIB1 ENSGALG00000008302 13946 0.729 - - - - - - 0.729 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
63. RPAP3 ENSGALG00000009743 3380 0.729 - - - - - - 0.729 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
64. LOC107057078 ENSGALG00000004725 28489 0.729 - - 0.729 - - - - - - - acyl-CoA dehydrogenase family member 10-like, transcript variant X7
65. DHRS7 ENSGALG00000011921 4470 0.728 - - - - - - - 0.728 - - dehydrogenase/reductase 7 [Source:HGNC Symbol;Acc:HGNC:21524]
66. Sep-15 Sep-15 6935 0.728 - - - - - - - 0.728 - -
67. XPNPEP1 ENSGALG00000008523 2257 0.728 - - - - - - 0.728 - - - X-prolyl aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:12822]
68. ECHDC2 ENSGALG00000010647 4413 0.728 - - - - - - - 0.728 - - enoyl-CoA hydratase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23408]
69. MDFIC ENSGALG00000026838 3881 0.726 - - - - - 0.726 - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
70. CDH11 ENSGALG00000039985 18212 0.725 - - - - - - 0.725 - - - cadherin 11 [Source:NCBI gene;Acc:415797]
71. MT-ND3 MT-ND3 510729 0.723 - - - - - 0.723 - - - -
72. CFC1 ENSGALG00000012623 3164 0.723 0.723 - - - - - - - - - cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
73. PHLDB2 ENSGALG00000015377 8560 0.723 - - - - - - 0.723 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
74. TMCO3 ENSGALG00000016824 761 0.722 - - - - - - 0.722 - - - transmembrane and coiled-coil domains 3 [Source:NCBI gene;Acc:395675]
75. MTCH2 ENSGALG00000036196 15097 0.721 - - - - - - 0.721 - - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
76. SUCLG2 ENSGALG00000007652 9688 0.72 - - - - - 0.720 - - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
77. TBC1D4 ENSGALG00000016925 2961 0.719 - - - - - 0.719 - - - - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
78. PRKAR1A ENSGALG00000004237 4785 0.719 - - - - - - - - - 0.719 protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
79. DLC1 ENSGALG00000013715 5297 0.719 - - 0.719 - - - - - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
80. CSRP3 ENSGALG00000004044 456 0.717 0.717 - - - - - - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
81. MYH15 ENSGALG00000015358 6304 0.715 0.715 - - - - - - - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
82. SKAP2 ENSGALG00000030081 13746 0.715 - - - - - - 0.715 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
83. ADAMTS19 ENSGALG00000000151 3217 0.715 - - - - - - 0.715 - - - ADAM metallopeptidase with thrombospondin type 1 motif 19 [Source:HGNC Symbol;Acc:HGNC:17111]
84. SNAI2 ENSGALG00000030902 8201 0.712 - - - - - - - - - 0.712 snail family transcriptional repressor 2
85. EXOSC3 ENSGALG00000002426 7255 0.711 - - - - - - 0.711 - - - exosome component 3 [Source:NCBI gene;Acc:423626]
86. HSPB2 ENSGALG00000040842 197 0.709 0.709 - - - - - - - - - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
87. SLC25A36 ENSGALG00000005283 4221 0.709 - - - - - - 0.709 - - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
88. VCAM1 ENSGALG00000005257 102 0.709 0.709 - - - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
89. TCTE3 ENSGALG00000011189 106 0.708 - - - - - 0.708 - - - - t-complex-associated-testis-expressed 3 [Source:HGNC Symbol;Acc:HGNC:11695]
90. HAPLN1 ENSGALG00000015627 14942 0.707 - - - - - - 0.707 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
91. TJP2 ENSGALG00000015109 4002 0.706 - - - - - - 0.706 - - - tight junction protein 2 [Source:NCBI gene;Acc:395751]
92. ADI1 ENSGALG00000025796 8636 0.706 - - - - - - 0.706 - - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
93. AMBRA1 ENSGALG00000008358 2865 0.705 - - - - - - 0.705 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
94. ADPRHL1 ENSGALG00000016826 133 0.705 0.705 - - - - - - - - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
95. LIMS1 ENSGALG00000029970 7244 0.703 - - - - - - 0.703 - - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
96. MYH7B ENSGALG00000030985 199 0.702 0.702 - - - - - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
97. ENSGALG00000001398 ENSGALG00000001398 3248 0.702 - - - - - - 0.702 - - -
98. CSTF2 ENSGALG00000006760 8820 0.702 - - - - - - - 0.702 - - cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
99. SYNE1 ENSGALG00000013505 2324 0.702 - - 0.702 - - - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
100. DGKZ ENSGALG00000008380 5389 0.701 - - - - - - 0.701 - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA