Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RCC1

Gene Name Gene ID Reads Annotation
RCC1 ENSGALG00000030097 1823 regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:HGNC:1913]











Genes with expression patterns similar to RCC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RCC1 ENSGALG00000030097 1823 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:HGNC:1913]
2. CHST3 ENSGALG00000024056 308 0.833 - - - - - - 0.833 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
3. ABAT ENSGALG00000007334 28 0.83 - - - - - - 0.830 - - - 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]
4. KCNMB2 ENSGALG00000031929 97 0.824 - - - - - - 0.824 - - - potassium calcium-activated channel subfamily M regulatory beta subunit 2, transcript variant X4
5. C3H20ORF94 C3H20ORF94 414 0.8 - - - - - - - - - 0.800
6. INPP5B ENSGALG00000001606 458 0.797 - - - - - - - - - 0.797 inositol polyphosphate-5-phosphatase B [Source:HGNC Symbol;Acc:HGNC:6077]
7. GNPTG ENSGALG00000006441 50 0.793 - - - - - - 0.793 - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
8. TTC28 ENSGALG00000005676 36 0.792 - - - - - - 0.792 - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
9. PCDH12 ENSGALG00000002544 36 0.791 - - - - - - 0.791 - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
10. MED18 ENSGALG00000028149 2684 0.791 - - - - - - - - - 0.791 mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
11. KCNV1 ENSGALG00000031449 64 0.775 - - - - - - 0.775 - - - potassium voltage-gated channel modifier subfamily V member 1
12. DIRAS2 ENSGALG00000005323 11 0.775 - - - - - - 0.775 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
13. GLRA2 ENSGALG00000016571 10 0.775 - - - - - - 0.775 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
14. PLA2G1BL ENSGALG00000007236 4 0.775 - - - - - - 0.775 - - - phospholipase A2, major isoenzyme-like
15. ADAM23 ENSGALG00000008582 28 0.775 - - - - - - 0.775 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
16. FGA ENSGALG00000009266 291 0.775 - - - - - - 0.775 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
17. ENSGALG00000027367 ENSGALG00000027367 7 0.775 - - - - - - 0.775 - - -
18. TRIM25 ENSGALG00000003144 12 0.775 - - - - - - 0.775 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
19. ST8SIA6 ENSGALG00000008671 8 0.775 - - - - - - 0.775 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
20. LHX8 ENSGALG00000011369 77 0.775 - - - - - - 0.775 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
21. VRK2 ENSGALG00000032770 117 0.775 - - - - - - 0.775 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
22. ZBTB11 ENSGALG00000015334 22 0.775 - - - - - - 0.775 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
23. FGD4 ENSGALG00000012932 50 0.775 - - - - - - 0.775 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
24. LOC427545 ENSGALG00000004428 3 0.775 - - - - - - 0.775 - - - histamine H3 receptor-like
25. COL4A3BP ENSGALG00000014952 96 0.775 - - - - - - 0.775 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
26. FOXP1 127 0.775 - - - - - - 0.775 - - - forkhead box P1, transcript variant X14
27. CBLN4 ENSGALG00000030821 9 0.775 - - - - - - 0.775 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
28. HPS3 ENSGALG00000040089 44 0.775 - - - - - - 0.775 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
29. FGF13 ENSGALG00000006508 8 0.775 - - - - - - 0.775 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
30. SNORD79 SNORD79 12 0.775 - - - - - - 0.775 - - -
31. LZTS2 ENSGALG00000023612 9 0.775 - - - - - - 0.775 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
32. P2RY13 ENSGALG00000039432 16 0.775 - - - - - - 0.775 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
33. MMP13 ENSGALG00000017183 7 0.775 - - - - - - 0.775 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
34. POLR1A ENSGALG00000038160 236 0.775 - - - - - - 0.775 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
35. SPERT ENSGALG00000016981 145 0.775 - - - - - - 0.775 - - - spermatid associated [Source:NCBI gene;Acc:418848]
36. EGR4 ENSGALG00000016086 4 0.775 - - - - - - 0.775 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
37. ENSGALG00000010218 ENSGALG00000010218 12 0.775 - - - - - - 0.775 - - -
38. RD RD 99 0.775 - - - - - - 0.775 - - -
39. ENSGALG00000000882 ENSGALG00000000882 1208 0.766 - - - - - - - - - 0.766
40. ENSGALG00000014441 ENSGALG00000014441 1442 0.764 - - - - - - - - - 0.764
41. TXNRD2 ENSGALG00000001988 1208 0.761 - - - - - - - - - 0.761 thioredoxin reductase 2 [Source:NCBI gene;Acc:416782]
42. MRPL1 ENSGALG00000010324 5972 0.759 - - - - - - - - - 0.759 mitochondrial ribosomal protein L1 [Source:HGNC Symbol;Acc:HGNC:14275]
43. RAVER2 ENSGALG00000033759 4283 0.759 - - - - - 0.759 - - - - ribonucleoprotein, PTB binding 2 [Source:HGNC Symbol;Acc:HGNC:25577]
44. MAP2K4 ENSGALG00000032178 5982 0.747 - - - - - - - - - 0.747 mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
45. gga-mir-6681 ENSGALG00000027840 546 0.745 - - - - - - - - - 0.745 gga-mir-6681 [Source:miRBase;Acc:MI0022502]
46. AIFM1 ENSGALG00000004003 10451 0.745 - - - - - - - - - 0.745 apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
47. TMEM70 ENSGALG00000033568 10720 0.731 - - - - - - - - - 0.731 transmembrane protein 70 [Source:NCBI gene;Acc:420188]
48. SRPR SRPR 21067 0.726 - - - - - - - - - 0.726
49. TMEFF1 ENSGALG00000013212 4222 0.72 - - 0.720 - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1
50. PTCHD1 ENSGALG00000016358 3882 0.719 - - - - - - - - - 0.719 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
51. FGF12 ENSGALG00000036971 2631 0.713 - - - - - - - - - 0.713 fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
52. ASPG ENSGALG00000011572 4984 0.711 - - - - - - - - - 0.711 asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
53. CYB5D2 ENSGALG00000001479 1452 0.71 - - - - - - - - - 0.710 cytochrome b5 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28471]
54. MRPS23 ENSGALG00000005559 10360 0.71 - - - - - - - - 0.710 - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
55. PLXNC1 ENSGALG00000011309 69 0.707 - - - - - - 0.707 - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
56. CALCOCO2 ENSGALG00000001525 3121 0.707 - - - - - - - - - 0.707 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
57. EMG1 ENSGALG00000014568 8102 0.703 - - - - - - - - - 0.703 EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
58. SORCS3 ENSGALG00000008434 136 0.702 - - - - - - 0.702 - - - sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
59. LIN28B ENSGALG00000026761 13314 0.702 - - - - - - - - - 0.702 lin-28 homolog B [Source:NCBI gene;Acc:421786]
60. UTP20 ENSGALG00000011643 3012 0.701 - - 0.701 - - - - - - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
61. MMP17 3885 0.701 - - - - - 0.701 - - - - matrix metallopeptidase 17
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA