Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RCAN3

Gene Name Gene ID Reads Annotation
RCAN3 ENSGALG00000004282 7778 RCAN family member 3 [Source:NCBI gene;Acc:419698]











Genes with expression patterns similar to RCAN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RCAN3 ENSGALG00000004282 7778 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RCAN family member 3 [Source:NCBI gene;Acc:419698]
2. IGDCC4 ENSGALG00000007410 5457 2.507 - - - - 0.939 - 0.776 0.792 - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
3. CDC42SE2 ENSGALG00000027258 4725 1.846 - - - - 0.957 - 0.889 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
4. DNAJC12 ENSGALG00000002769 1418 1.841 - - - - 0.967 - 0.874 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
5. GPN3 ENSGALG00000003807 6320 1.811 - - - - 0.927 - 0.884 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
6. XPO7 ENSGALG00000001838 1875 1.804 - - - - 0.965 - 0.839 - - - exportin 7 [Source:NCBI gene;Acc:426925]
7. IGBP1 ENSGALG00000044628 9200 1.778 - - - - 0.970 - - 0.808 - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
8. TLCD1 ENSGALG00000003973 17569 1.774 - - - - 0.962 - 0.812 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
9. SHROOM2 ENSGALG00000030802 4517 1.746 - - - - 0.952 - 0.794 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
10. RNASEH1 ENSGALG00000016389 2694 1.745 - - - - - - 0.853 0.892 - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
11. BIVM ENSGALG00000016861 3987 1.743 - - - - - - 0.868 0.875 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
12. NDRG3 ENSGALG00000001492 5919 1.74 - - - - - - 0.871 0.869 - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
13. SIRT1 ENSGALG00000002761 9028 1.736 - - - - 0.959 - - 0.777 - - sirtuin 1 [Source:NCBI gene;Acc:423646]
14. PKN3 532 1.728 - - - - - - 0.851 0.877 - - protein kinase N3, transcript variant X2
15. NAP1L1 ENSGALG00000010238 14506 1.717 - - - - 0.965 - 0.752 - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
16. PTTG1 17936 1.714 - - - - 0.932 - - 0.782 - - pituitary tumor-transforming 1, transcript variant X1
17. COIL ENSGALG00000003158 7806 1.71 - - - - 0.962 - 0.748 - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
18. PUM1 ENSGALG00000042598 9392 1.689 - - - - 0.952 - 0.737 - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
19. AIP ENSGALG00000040247 4166 1.661 - - - - - - 0.707 0.954 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
20. SLC25A28 ENSGALG00000007479 4902 1.62 - - 0.726 - - - - 0.894 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
21. GAS2 ENSGALG00000003655 2672 1.61 - - - - - - 0.867 0.743 - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
22. UBR4 ENSGALG00000030563 5225 1.597 - - - - - - 0.779 0.818 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
23. PRPF40A ENSGALG00000012526 7724 1.591 - - - - - - 0.753 0.838 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
24. DPYSL3 ENSGALG00000007582 7743 1.59 - - - - - - 0.852 0.738 - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
25. CCNK ENSGALG00000011138 6416 1.57 - - - - - - 0.852 0.718 - - cyclin K [Source:NCBI gene;Acc:423446]
26. RNF185 ENSGALG00000006960 5428 1.554 - - - - - - 0.720 0.834 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
27. TSPAN12 ENSGALG00000009029 2145 1.465 - - - - - - 0.726 0.739 - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
28. COMMD8 ENSGALG00000026279 13509 0.972 - - - - 0.972 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
29. PTPN12 9302 0.97 - - - - 0.970 - - - - - protein tyrosine phosphatase, non-receptor type 12
30. BAG4 ENSGALG00000003254 5751 0.969 - - - - 0.969 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
31. POLR2B ENSGALG00000011387 4864 0.968 - - - - 0.968 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
32. EAPP ENSGALG00000010007 5080 0.968 - - - - 0.968 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
33. DDX55 ENSGALG00000003298 2315 0.968 - - - - 0.968 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
34. CBWD1 ENSGALG00000010147 2765 0.967 - - - - 0.967 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
35. FH ENSGALG00000013165 13669 0.967 - - - - 0.967 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
36. KNOP1 ENSGALG00000002042 6251 0.966 - - - - 0.966 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
37. ENSGALG00000011687 ENSGALG00000011687 4553 0.966 - - - - 0.966 - - - - -
38. LATS2 4776 0.966 - - - - 0.966 - - - - - large tumor suppressor kinase 2
39. IGF1R ENSGALG00000040651 772 0.965 - - - - 0.965 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
40. STK3 ENSGALG00000032850 6339 0.964 - - - - 0.964 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
41. CTSZ ENSGALG00000007462 630 0.964 - - - - 0.964 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
42. RABEP1 ENSGALG00000001737 2650 0.964 - - - - 0.964 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
43. REST 2394 0.964 - - - - 0.964 - - - - - RE1 silencing transcription factor
44. SSPN ENSGALG00000014042 638 0.964 - - - - 0.964 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
45. ZBTB10 ENSGALG00000034376 3271 0.963 - - - - 0.963 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
46. ELL2 ENSGALG00000014678 1111 0.963 - - - - 0.963 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
47. REEP5 ENSGALG00000023157 6282 0.963 - - - - 0.963 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
48. FERMT2 ENSGALG00000012425 5480 0.961 - - - - 0.961 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
49. MRPS27 ENSGALG00000015002 6541 0.96 - - - - 0.960 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
50. ATG5 ENSGALG00000015387 7752 0.96 - - - - 0.960 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
51. NT5C3B ENSGALG00000003651 5190 0.96 - - - - - - - 0.960 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
52. CZH9ORF41 CZH9ORF41 3492 0.96 - - - - 0.960 - - - - -
53. TMEM165 ENSGALG00000027886 5468 0.96 - - - - 0.960 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
54. MKI67 ENSGALG00000025996 28136 0.96 - - - - 0.960 - - - - - marker of proliferation Ki-67, transcript variant X3
55. TRAPPC12 ENSGALG00000016387 2593 0.959 - - - - 0.959 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
56. SSR2 ENSGALG00000000764 32190 0.959 - - - - 0.959 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
57. TCP11L1 ENSGALG00000011688 2427 0.958 - - - - 0.958 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
58. WDR82 ENSGALG00000025904 4783 0.957 - - - - 0.957 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
59. NOP58 ENSGALG00000008454 34630 0.956 - - - - 0.956 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
60. MRPL23 ENSGALG00000006561 13737 0.956 - - - - 0.956 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
61. CSNK1G1 ENSGALG00000030812 31618 0.956 - - - - 0.956 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
62. MRPS25 ENSGALG00000008506 12131 0.955 - - - - 0.955 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
63. ENSGALG00000014852 ENSGALG00000014852 15288 0.955 - - - - 0.955 - - - - -
64. STRAP ENSGALG00000013092 13100 0.955 - - - - 0.955 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
65. YY1 ENSGALG00000017388 1933 0.954 - - - - 0.954 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
66. TLK2 ENSGALG00000000410 4690 0.953 - - - - 0.953 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
67. NFASC ENSGALG00000031776 4264 0.953 - - - - 0.953 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
68. POLR3F ENSGALG00000008749 5645 0.952 - - - - 0.952 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
69. AATF ENSGALG00000005420 6501 0.951 - - - - 0.951 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
70. OGT ENSGALG00000005425 31074 0.95 - - - - 0.950 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
71. PSPC1 ENSGALG00000017142 13036 0.949 - - - - 0.949 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
72. ADD3 ENSGALG00000008542 13814 0.949 - - - - 0.949 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
73. SFSWAP ENSGALG00000002487 9977 0.948 - - - - 0.948 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
74. SH2D3C ENSGALG00000005036 5101 0.948 - - - - 0.948 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
75. FBXO9 ENSGALG00000016320 9600 0.947 - - - - 0.947 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
76. SKP2 ENSGALG00000003547 14637 0.946 - - - - 0.946 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
77. NAA25 ENSGALG00000041821 12729 0.946 - - - - 0.946 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
78. SAR1B ENSGALG00000038753 6493 0.945 - - - - 0.945 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
79. PCBP4 ENSGALG00000027695 7937 0.945 - - - - 0.945 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
80. TK2 ENSGALG00000034216 5394 0.942 - - - - 0.942 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
81. KPNA3 ENSGALG00000017009 17330 0.94 - - - - 0.940 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
82. LARP1 ENSGALG00000040109 14808 0.94 - - - - 0.940 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
83. PNRC2 ENSGALG00000004122 19228 0.939 - - - - 0.939 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
84. PLAA ENSGALG00000001782 5459 0.939 - - - - 0.939 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
85. OLA1 ENSGALG00000009325 26414 0.937 - - - - 0.937 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
86. CCNL2 ENSGALG00000001551 2620 0.937 - - - - - - - 0.937 - - cyclin L2 [Source:NCBI gene;Acc:395124]
87. RANGAP1 ENSGALG00000011966 20170 0.937 - - - - 0.937 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
88. GFPT1 ENSGALG00000036391 14025 0.935 - - - - 0.935 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
89. FBXO7 ENSGALG00000012569 4124 0.935 - - - - - - - 0.935 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
90. TBCA ENSGALG00000004353 18510 0.934 - - - - 0.934 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
91. DHFR ENSGALG00000026757 18478 0.931 - - - - 0.931 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
92. RPL24 ENSGALG00000015339 227460 0.93 - - - - 0.930 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
93. MTIF2 ENSGALG00000031265 2366 0.93 - - - - - - - 0.930 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
94. LIMS1 ENSGALG00000029970 7244 0.929 - - - - - - - 0.929 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
95. CLMP ENSGALG00000006507 8079 0.929 - - - - - - - 0.929 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
96. HDAC1 ENSGALG00000003297 3528 0.928 - - - - - - - 0.928 - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
97. LY6E ENSGALG00000041621 16227 0.928 - - - - 0.928 - - - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
98. ACBD5 ENSGALG00000007519 1646 0.927 - - - - - - - 0.927 - - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
99. DRAXIN ENSGALG00000004631 3122 0.927 - - - - 0.927 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
100. EXO1 ENSGALG00000010748 7572 0.927 - - - - 0.927 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]

There are 523 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA