Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RC3H2

Gene Name Gene ID Reads Annotation
RC3H2 ENSGALG00000001253 18 ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]











Genes with expression patterns similar to RC3H2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RC3H2 ENSGALG00000001253 18 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
2. ST3GAL5 ENSGALG00000033260 19 1.721 - - - - 0.961 - - - - 0.760 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
3. ACOT6 ENSGALG00000009292 38 1.604 - - - - 0.788 - - 0.816 - - acyl-CoA thioesterase 6 [Source:HGNC Symbol;Acc:HGNC:33159]
4. ADAM28 ENSGALG00000000357 57 1.602 - - - - 0.828 - - 0.774 - - ADAM metallopeptidase domain 28, transcript variant X2
5. ENSGALG00000026756 ENSGALG00000026756 134 1.569 - - - - - 0.751 - - - 0.818
6. PRPF19 ENSGALG00000040048 168 1.518 - - 0.748 - - - - 0.770 - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
7. C9orf3 C9orf3 47 1.506 - - - - 0.744 0.762 - - - -
8. MYLK3 ENSGALG00000004334 13 1 - - - - 1.000 - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
9. TMEM132D ENSGALG00000002671 12 1 - - - - 1.000 - - - - - transmembrane protein 132D, transcript variant X6
10. RNF216 ENSGALG00000004629 84 1 - - - - - - - 1.000 - - ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]
11. SLC22A7 ENSGALG00000001661 9 1 - - - - 1.000 - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
12. C2orf50 ENSGALG00000046449 17 1 - - - - 1.000 - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
13. TAB3 ENSGALG00000016284 40 1 - - - - 1.000 - - - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
14. SIX4 ENSGALG00000017389 10 1 - - - - 1.000 - - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
15. SNX21 ENSGALG00000006836 5 1 - - - - 1.000 - - - - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
16. TECPR1 ENSGALG00000003507 20 1 - - - - 1.000 - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
17. HOXA9 ENSGALG00000028983 9298 1 - - - - 1.000 - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
18. ENSGALG00000004630 ENSGALG00000004630 1 1 - - - - - - - - - 1.000
19. VLDL VLDL 13 1 - - - - 1.000 - - - - -
20. MILR1 ENSGALG00000046212 7 1 - - - - 1.000 - - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
21. ENSGALG00000022155 ENSGALG00000022155 80 0.991 - - - - 0.991 - - - - -
22. ENSGALG00000013318 ENSGALG00000013318 8 0.986 - - - - 0.986 - - - - -
23. TAPBPL ENSGALG00000014428 39 0.985 - - - - 0.985 - - - - - TAP binding protein like [Source:NCBI gene;Acc:426340]
24. K123 ENSGALG00000041978 16 0.977 - - - - 0.977 - - - - - K123 protein [Source:NCBI gene;Acc:395873]
25. SLC35A5 11 0.969 - - - - - 0.969 - - - - solute carrier family 35 member A5, transcript variant X6
26. ERCC6L2 ENSGALG00000012621 77 0.962 - - - - - - - 0.962 - - excision repair cross-complementation group 6 like 2, transcript variant X8
27. TMEM156 ENSGALG00000024490 9 0.956 - - - - 0.956 - - - - - transmembrane protein 156, transcript variant X5
28. ENSGALG00000028328 ENSGALG00000028328 23 0.953 - - - - 0.953 - - - - -
29. HECW1 ENSGALG00000037193 24 0.95 - - - - 0.950 - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
30. ENSGALG00000000346 ENSGALG00000000346 130 0.947 - - - - 0.947 - - - - -
31. PDGFRL ENSGALG00000013617 11 0.946 - - - - - 0.946 - - - - platelet derived growth factor receptor like [Source:HGNC Symbol;Acc:HGNC:8805]
32. TMEM52B ENSGALG00000034698 169 0.942 - - - - 0.942 - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
33. ENSGALG00000004753 ENSGALG00000004753 63 0.94 - - - - - - - 0.940 - -
34. DAPK1 ENSGALG00000012608 17 0.937 - - - - 0.937 - - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
35. ENSGALG00000010054 ENSGALG00000010054 81 0.933 - - - - 0.933 - - - - -
36. C2CD3 ENSGALG00000017314 13 0.932 - - - - - 0.932 - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
37. PRPS2 ENSGALG00000016592 165 0.917 - - - - 0.917 - - - - - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
38. ENSGALG00000017269 ENSGALG00000017269 13 0.916 - - - - - 0.916 - - - -
39. OCM ENSGALG00000003462 6 0.916 - - - - - 0.916 - - - - oncomodulin [Source:NCBI gene;Acc:386586]
40. POMT1 ENSGALG00000003757 38 0.916 - - - - - 0.916 - - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
41. ENSGALG00000025883 ENSGALG00000025883 6 0.916 - - - - - 0.916 - - - -
42. OVCH2 ENSGALG00000005318 8 0.916 - - - - - 0.916 - - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
43. C16orf11 C16orf11 2 0.916 - - - - - 0.916 - - - -
44. ENSGALG00000020459 ENSGALG00000020459 3 0.916 - - - - - 0.916 - - - -
45. SLC24A1 ENSGALG00000007495 3 0.916 - - - - - 0.916 - - - - solute carrier family 24 member 1 [Source:NCBI gene;Acc:414892]
46. NLGN3 ENSGALG00000005553 4 0.916 - - - - - 0.916 - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
47. ENSGALG00000016257 ENSGALG00000016257 4 0.916 - - - - - 0.916 - - - -
48. U4atac U4atac 23 0.916 - - - - - 0.916 - - - -
49. ATP12A ENSGALG00000006469 7 0.916 - - - - - 0.916 - - - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
50. GPR6 ENSGALG00000015068 2 0.916 - - - - - 0.916 - - - - G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:HGNC:4515]
51. SUSD4 ENSGALG00000009388 48 0.916 - - - - - 0.916 - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
52. BEGAIN ENSGALG00000011236 35 0.916 - - - - - 0.916 - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
53. GHSR ENSGALG00000027947 24 0.916 - - - - - 0.916 - - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
54. LRRC47 7 0.916 - - - - - 0.916 - - - - leucine rich repeat containing 47
55. ENSGALG00000009227 ENSGALG00000009227 2 0.916 - - - - - 0.916 - - - -
56. OR14I1 OR14I1 14 0.914 - - - - - 0.914 - - - -
57. NIPA1 ENSGALG00000039811 20 0.914 - - - - - 0.914 - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
58. CAPN6 ENSGALG00000008006 16 0.912 - - - - - 0.912 - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
59. ENSGALG00000003170 ENSGALG00000003170 100 0.908 - - - - - 0.908 - - - -
60. NCX3 NCX3 16 0.907 - - - - 0.907 - - - - -
61. ZNF22 ZNF22 25 0.905 - - - - - 0.905 - - - -
62. ENSGALG00000023463 ENSGALG00000023463 2 0.904 - - - - - 0.904 - - - -
63. ENSGALG00000021517 ENSGALG00000021517 7 0.904 - - - - 0.904 - - - - -
64. OSTF1 ENSGALG00000017447 39 0.901 - - - - - 0.901 - - - - osteoclast stimulating factor 1 [Source:NCBI gene;Acc:427258]
65. IL20RA ENSGALG00000013869 15 0.9 - - - - - 0.900 - - - - interleukin 20 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6003]
66. ENSGALG00000018621 ENSGALG00000018621 8 0.9 - - - - - 0.900 - - - -
67. COL8A2 ENSGALG00000002298 27 0.891 - - - - 0.891 - - - - - collagen type VIII alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2216]
68. ACYP2 ENSGALG00000027632 90 0.89 - - - - - - - 0.890 - - acylphosphatase 2 [Source:NCBI gene;Acc:421217]
69. AEBP2 ENSGALG00000038026 133 0.888 - - - - 0.888 - - - - - AE binding protein 2 [Source:HGNC Symbol;Acc:HGNC:24051]
70. TRPC6 ENSGALG00000029416 281 0.887 - - - - - 0.887 - - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
71. CHRNA3 ENSGALG00000003014 6 0.886 - - - - - 0.886 - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
72. NUDT2 ENSGALG00000027295 15 0.886 - - - - - 0.886 - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
73. MDM4 ENSGALG00000000636 91 0.885 - - - - - 0.885 - - - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
74. PPP1R36 ENSGALG00000040026 24 0.884 - - - - 0.884 - - - - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
75. GLP2R ENSGALG00000041800 10 0.884 - - - - - 0.884 - - - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
76. GNAI1 ENSGALG00000008382 195 0.882 - - - - - 0.882 - - - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
77. UBE2L6 ENSGALG00000046098 393 0.877 - - - - - 0.877 - - - - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
78. PCGF5 ENSGALG00000006502 2 0.876 - - - - - - - - - 0.876 polycomb group ring finger 5 [Source:NCBI gene;Acc:423796]
79. RAD21L1 ENSGALG00000006186 2 0.876 - - - - - - - - - 0.876 RAD21 cohesin complex component like 1 [Source:HGNC Symbol;Acc:HGNC:16271]
80. MGAT5B ENSGALG00000001740 2 0.876 - - - - - - - - - 0.876 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:24140]
81. DCAKD ENSGALG00000000870 4 0.876 - - - - - - - - - 0.876 dephospho-CoA kinase domain containing [Source:HGNC Symbol;Acc:HGNC:26238]
82. ENSGALG00000028479 ENSGALG00000028479 5 0.876 - - - - - - - - - 0.876
83. EVI2A ENSGALG00000039084 13 0.876 - - - - - - - - - 0.876 ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
84. GBX2 ENSGALG00000013342 5 0.876 - - - - - - - - - 0.876 gastrulation brain homeobox 2 [Source:NCBI gene;Acc:395950]
85. DOCK3 ENSGALG00000002335 5 0.876 - - - - - - - - - 0.876 dedicator of cytokinesis 3 [Source:HGNC Symbol;Acc:HGNC:2989]
86. ATP10B ENSGALG00000001662 15 0.876 - - - - - - - - - 0.876 ATPase phospholipid transporting 10B (putative) [Source:HGNC Symbol;Acc:HGNC:13543]
87. ENSGALG00000028778 ENSGALG00000028778 47 0.876 - - - - - - - - - 0.876
88. TIMP3_1 ENSGALG00000028627 24 0.876 - - - - - - - - - 0.876 TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
89. ENSGALG00000000407 ENSGALG00000000407 32 0.876 - - - - - - - - - 0.876
90. ENSGALG00000012780 ENSGALG00000012780 10 0.876 - - - - - - - - - 0.876
91. RNF217 ENSGALG00000013651 1 0.876 - - - - - - - - - 0.876 ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
92. C19orf44 C19orf44 24 0.876 - - - - - - - - - 0.876
93. ADRA2C ENSGALG00000015608 42 0.876 - - - - - - - - - 0.876 adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
94. SLC1A7 ENSGALG00000010673 1 0.876 - - - - - - - - - 0.876 solute carrier family 1 member 7 [Source:HGNC Symbol;Acc:HGNC:10945]
95. FOXN4 ENSGALG00000005062 7 0.876 - - - - - - - - - 0.876 forkhead box N4 [Source:NCBI gene;Acc:416898]
96. GRIN1 ENSGALG00000008898 18 0.876 - - - - - - - - - 0.876 glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
97. CSGALNACT1 ENSGALG00000010125 5 0.876 - - - - - - - - - 0.876 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
98. ABCC5 ENSGALG00000008369 1 0.876 - - - - - - - - - 0.876 ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]
99. FAM198A ENSGALG00000037533 7 0.876 - - - - - - - - - 0.876 family with sequence similarity 198 member A [Source:HGNC Symbol;Acc:HGNC:24485]
100. SHC1 ENSGALG00000039775 219 0.875 - - - - 0.875 - - - - - SHC adaptor protein 1 [Source:NCBI gene;Acc:395934]

There are 236 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA