Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RC3H1

Gene Name Gene ID Reads Annotation
RC3H1 ENSGALG00000004587 40 ring finger and CCCH-type domains 1 [Source:HGNC Symbol;Acc:HGNC:29434]











Genes with expression patterns similar to RC3H1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RC3H1 ENSGALG00000004587 40 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring finger and CCCH-type domains 1 [Source:HGNC Symbol;Acc:HGNC:29434]
2. CRYGS ENSGALG00000006574 9 1.533 - - 0.761 0.772 - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
3. GPATCH2L ENSGALG00000010350 8 0.936 - - - - - - - - - 0.936 G-patch domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:20210]
4. GUCY1B3 29 0.935 - - - - - - - - - 0.935 guanylate cyclase 1 soluble subunit beta, transcript variant X2
5. PDE6H ENSGALG00000025735 37 0.919 - - - - - - - - - 0.919 phosphodiesterase 6H [Source:NCBI gene;Acc:378929]
6. STS ENSGALG00000016622 11 0.918 - - - - - - - - - 0.918 steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
7. EPYC ENSGALG00000011269 17 0.916 - - - 0.916 - - - - - - epiphycan [Source:NCBI gene;Acc:417890]
8. ENSGALG00000025967 ENSGALG00000025967 7 0.914 - - - - - - - - - 0.914
9. ENSGALG00000021884 ENSGALG00000021884 29 0.914 - - - - - - - - - 0.914
10. DLEC1 ENSGALG00000005826 23 0.914 - - - - - - - - - 0.914 DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
11. FABP2 ENSGALG00000011986 15 0.914 - - - - - - - - - 0.914 fatty acid binding protein 2 [Source:NCBI gene;Acc:422678]
12. TMEM189 ENSGALG00000026906 14 0.914 - - - - - - - - - 0.914 transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
13. DNAJC28 ENSGALG00000037414 6 0.914 - - - - - - - - - 0.914 DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
14. CFD ENSGALG00000040832 222 0.908 - - - - - - - - - 0.908 complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
15. SNORA75 SNORA75 41 0.906 - - - - - - - - - 0.906
16. TNS3 ENSGALG00000039139 63 0.899 - - - - - - - - - 0.899 tensin 3 [Source:NCBI gene;Acc:420792]
17. TTPA ENSGALG00000030031 500 0.892 - - - - - - - - - 0.892 alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
18. IGF2R ENSGALG00000011621 81 0.889 - - - - - - - - - 0.889 insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
19. ENSGALG00000000865 ENSGALG00000000865 46 0.887 - - - - - - - - - 0.887
20. GFAP ENSGALG00000000909 21 0.886 - - - - - - - - - 0.886 glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
21. ENSGALG00000027667 ENSGALG00000027667 12 0.877 - - - - - - - - - 0.877
22. CASR ENSGALG00000038405 53 0.877 - - - - - - - - - 0.877 calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
23. SH2D4B ENSGALG00000002370 10 0.875 - - - - - 0.875 - - - - SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
24. EDN2 ENSGALG00000000667 219 0.874 - - - - - - - - - 0.874 endothelin 2 [Source:NCBI gene;Acc:419559]
25. MIF4GD ENSGALG00000026715 41 0.874 - - - - - - - - - 0.874 MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
26. MAP2K1 ENSGALG00000007687 250 0.874 - - - - - - - - - 0.874 mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
27. ILDR2 ENSGALG00000015458 16 0.869 - - - - - - - - - 0.869 immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
28. PCNX PCNX 110 0.866 - - - - - - - - - 0.866
29. FGF3 ENSGALG00000026853 89 0.866 - - - - - 0.866 - - - - fibroblast growth factor 3 [Source:NCBI gene;Acc:396267]
30. ARL11 ENSGALG00000022733 490 0.865 - - - - - - - - - 0.865 ADP ribosylation factor like GTPase 11 [Source:HGNC Symbol;Acc:HGNC:24046]
31. NUB1 ENSGALG00000006181 269 0.863 - - - - - - - - - 0.863 negative regulator of ubiquitin like proteins 1 [Source:NCBI gene;Acc:420433]
32. ZMAT1 ZMAT1 12 0.861 - - - - - - 0.861 - - -
33. PTPRO ENSGALG00000013085 26 0.861 - - - - - - 0.861 - - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
34. SCNN1G ENSGALG00000006270 178 0.858 - - - - - - - - - 0.858 sodium channel epithelial 1 gamma subunit [Source:HGNC Symbol;Acc:HGNC:10602]
35. MAP3K14 ENSGALG00000000685 57 0.851 - - - - - - - - - 0.851 mitogen-activated protein kinase kinase kinase 14 [Source:NCBI gene;Acc:419964]
36. TMEM51 ENSGALG00000035819 83 0.85 - - - - - - - - - 0.850 transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]
37. TRIM13 ENSGALG00000017011 92 0.849 - - - - - - - - - 0.849 tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
38. DSEL ENSGALG00000042505 92 0.845 - - - - - - - - - 0.845 dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
39. INF2 ENSGALG00000011608 36 0.844 - - - - - - - - - 0.844 inverted formin, FH2 and WH2 domain containing [Source:HGNC Symbol;Acc:HGNC:23791]
40. SLC22A18 ENSGALG00000006454 24 0.843 - - - - - - - - - 0.843 solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
41. MYL2 ENSGALG00000004582 2245 0.842 - - - - - - - - - 0.842 myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
42. HIRA ENSGALG00000033598 296 0.838 - - - - - - - - - 0.838 histone cell cycle regulator [Source:NCBI gene;Acc:374074]
43. RGS8 ENSGALG00000026263 124 0.838 - - - - - - - - - 0.838 regulator of G protein signaling 8 [Source:HGNC Symbol;Acc:HGNC:16810]
44. EXT2 ENSGALG00000031542 58 0.837 - - - - - - - - - 0.837 exostosin glycosyltransferase 2 [Source:NCBI gene;Acc:425859]
45. MEGF6L ENSGALG00000009458 14 0.836 - - - - - 0.836 - - - - multiple EGF-like-domains 6-like, transcript variant X21
46. STK40 ENSGALG00000032925 340 0.834 - - - - - - - - - 0.834 serine/threonine kinase 40 [Source:NCBI gene;Acc:395120]
47. TMTC1 ENSGALG00000012956 160 0.834 - - - 0.834 - - - - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
48. HSD3B2 HSD3B2 55 0.83 - - - - - - - - - 0.830
49. GMPR ENSGALG00000012705 30 0.83 - - - - - - - - - 0.830 guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
50. BBS9 ENSGALG00000031650 13 0.83 - - - - - - - - - 0.830 Bardet-Biedl syndrome 9, transcript variant X5
51. NRBP2 ENSGALG00000029760 1902 0.829 - - - - - - - - - 0.829 nuclear receptor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19339]
52. ABHD14A 174 0.829 - - - - - - - - - 0.829 abhydrolase domain containing 14A
53. OSCP1 ENSGALG00000002123 1129 0.828 - - - - - - - - - 0.828 organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
54. MICAL2 ENSGALG00000005540 25 0.823 - - - - - 0.823 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24693]
55. FAM117A ENSGALG00000009943 1 0.823 - - - - - 0.823 - - - - family with sequence similarity 117 member A [Source:HGNC Symbol;Acc:HGNC:24179]
56. IQGAP2 ENSGALG00000014978 544 0.823 - - - - - - 0.823 - - - IQ motif containing GTPase activating protein 2 [Source:NCBI gene;Acc:427211]
57. CGN ENSGALG00000000920 407 0.823 - - - - - - - - - 0.823 cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
58. FABP6 ENSGALG00000001445 1254 0.823 - - - - - - - - - 0.823 fatty acid binding protein 6 [Source:NCBI gene;Acc:416154]
59. PPP4R4 ENSGALG00000010950 19 0.823 - - - - - 0.823 - - - - protein phosphatase 4 regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:23788]
60. SERINC5 ENSGALG00000014798 52 0.821 - - - - - - - - - 0.821 serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
61. SDCCAG8 ENSGALG00000010713 311 0.819 - - - - - - - - - 0.819 serologically defined colon cancer antigen 8, transcript variant X5
62. C3ORF64 C3ORF64 49 0.816 - - - - - - - - - 0.816
63. GATSL3 668 0.815 - - - - - - - - - 0.815 GATS protein like 3, transcript variant X2
64. TNK2 ENSGALG00000027983 144 0.815 - - - - - - - - - 0.815 tyrosine kinase non receptor 2, transcript variant X7
65. YTHDC1 ENSGALG00000035906 471 0.812 - - - - - - - - - 0.812 YTH domain containing 1 [Source:NCBI gene;Acc:422656]
66. CTPS2 ENSGALG00000016549 718 0.812 - - - - - - - - - 0.812 CTP synthase 2 [Source:NCBI gene;Acc:418620]
67. STEAP3 ENSGALG00000012117 403 0.811 - - - - - - - - - 0.811 STEAP3 metalloreductase [Source:HGNC Symbol;Acc:HGNC:24592]
68. ENSGALG00000007210 ENSGALG00000007210 2203 0.811 - - - - - - - - - 0.811
69. MKRN2 ENSGALG00000004991 596 0.808 - - - - - - - - - 0.808 makorin ring finger protein 2 [Source:NCBI gene;Acc:374162]
70. CYP2U1 ENSGALG00000027908 13 0.808 - - - - - - - - - 0.808 cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
71. TCEANC2 ENSGALG00000010749 162 0.806 - - - - - - - - - 0.806 transcription elongation factor A N-terminal and central domain containing 2 [Source:NCBI gene;Acc:424657]
72. ENSGALG00000019077 ENSGALG00000019077 49 0.804 - - - - - 0.804 - - - -
73. EFCAB2 ENSGALG00000028017 266 0.8 - - - - - - - - - 0.800 EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:HGNC:28166]
74. LRRCC1 ENSGALG00000039499 480 0.798 - - - - - - - - - 0.798 leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
75. POLL ENSGALG00000007753 2032 0.798 - - - - - - - - - 0.798 DNA polymerase lambda [Source:HGNC Symbol;Acc:HGNC:9184]
76. PIGZ ENSGALG00000026294 99 0.793 - - - - - - - - - 0.793 phosphatidylinositol glycan anchor biosynthesis class Z, transcript variant X2
77. GYPC ENSGALG00000011566 99 0.792 - - 0.792 - - - - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
78. ENSGALG00000005723 ENSGALG00000005723 36 0.79 - - - - - - - - - 0.790
79. TLL2 ENSGALG00000005519 10 0.789 - - - 0.789 - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
80. PFN2 313 0.788 - - - - - - - - - 0.788 profilin 2, transcript variant X2
81. MAT1A ENSGALG00000002479 66 0.787 - - - - - - - - - 0.787 methionine adenosyltransferase 1A [Source:NCBI gene;Acc:423628]
82. SNAPC4 ENSGALG00000044726 36 0.787 - - - - - - - - - 0.787 small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
83. ANKMY1 ENSGALG00000033920 12 0.786 - - 0.786 - - - - - - - ankyrin repeat and MYND domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20987]
84. ACAD8 ENSGALG00000001557 2562 0.785 - - - - - - - - - 0.785 acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
85. ENSGALG00000019793 ENSGALG00000019793 198 0.782 - - - - - - - - - 0.782
86. IQCG ENSGALG00000007607 17 0.78 - - - - - - - - - 0.780 IQ motif containing G [Source:HGNC Symbol;Acc:HGNC:25251]
87. LRRTM1 ENSGALG00000015967 85 0.78 - - - 0.780 - - - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
88. RAB11FIP1 41 0.778 - - - - - 0.778 - - - - RAB11 family interacting protein 1, transcript variant X2
89. ENSGALG00000024441 ENSGALG00000024441 66 0.775 - - 0.775 - - - - - - -
90. PSEN2 ENSGALG00000009073 7 0.774 - - 0.774 - - - - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
91. MDH1B ENSGALG00000008548 22 0.773 - - - - - - - - - 0.773 malate dehydrogenase 1B [Source:HGNC Symbol;Acc:HGNC:17836]
92. TAMM41 ENSGALG00000004940 2 0.772 - - - 0.772 - - - - - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:HGNC Symbol;Acc:HGNC:25187]
93. VPAC2 VPAC2 45 0.772 - - - 0.772 - - - - - -
94. ZSWIM6 ENSGALG00000014734 7 0.772 - - - 0.772 - - - - - - zinc finger SWIM-type containing 6, transcript variant X2
95. SUFU ENSGALG00000008096 307 0.772 - - - 0.772 - - - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
96. THSD4 ENSGALG00000004087 12 0.772 - - - 0.772 - - - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
97. ELF5 ENSGALG00000035867 6 0.772 - - - 0.772 - - - - - - E74 like ETS transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3320]
98. SV2C ENSGALG00000014967 7 0.772 - - - 0.772 - - - - - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
99. ENSGALG00000021859 ENSGALG00000021859 2 0.772 - - - 0.772 - - - - - -
100. PTCH2 ENSGALG00000010133 16 0.772 - - - 0.772 - - - - - - patched 2 [Source:HGNC Symbol;Acc:HGNC:9586]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA