Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBX1

Gene Name Gene ID Reads Annotation
RBX1 ENSGALG00000011993 26090 ring-box 1 [Source:NCBI gene;Acc:418001]











Genes with expression patterns similar to RBX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBX1 ENSGALG00000011993 26090 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring-box 1 [Source:NCBI gene;Acc:418001]
2. CNTRL ENSGALG00000001513 1773 2.465 - - 0.847 - - - - 0.767 - 0.851 centriolin [Source:NCBI gene;Acc:417121]
3. CAMSAP1 ENSGALG00000001692 2617 1.714 - - 0.871 - - - - - - 0.843 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
4. WHSC1 1712 1.7 - - 0.865 - - - - - - 0.835 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
5. TYW3 ENSGALG00000032549 4869 1.69 - - 0.799 - - - 0.891 - - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
6. SMC4 ENSGALG00000009553 15715 1.685 - - 0.831 - - - - - - 0.854 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
7. HYAL3 ENSGALG00000029000 712 1.678 - - 0.827 - - - - - - 0.851 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
8. HNRNPLL ENSGALG00000008504 14719 1.677 - - 0.877 - - - - - - 0.800 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
9. EIF3H ENSGALG00000040522 39919 1.677 - - - - - - 0.884 0.793 - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
10. SLK ENSGALG00000008318 2220 1.654 - - 0.868 - - - - - - 0.786 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
11. RBBP8 ENSGALG00000014982 3255 1.639 - - 0.865 - - - - - - 0.774 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
12. GTF2E1 ENSGALG00000042320 7712 1.634 - - 0.874 - - - - - - 0.760 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
13. PRPF38B ENSGALG00000001972 2009 1.631 - - 0.812 - - - - - - 0.819 pre-mRNA processing factor 38B
14. SEC11C ENSGALG00000031663 4266 1.612 - - 0.723 - - - 0.889 - - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
15. CHAMP1 ENSGALG00000016813 508 1.603 - - 0.874 0.729 - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
16. SLC12A4 ENSGALG00000034179 5674 1.601 - - 0.795 - - - - - - 0.806 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
17. TWSG1 ENSGALG00000008400 1869 1.599 - - 0.813 - - - - - - 0.786 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
18. NCAPG2 ENSGALG00000006525 2319 1.591 - - - - - - - 0.764 - 0.827 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
19. ENSGALG00000028992 ENSGALG00000028992 185077 1.586 - - 0.716 - - - - - - 0.870
20. TMLHE ENSGALG00000007443 3619 1.581 - - 0.758 - - - - - - 0.823 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
21. CPT2 ENSGALG00000010681 3211 1.578 - - 0.718 - - - - - - 0.860 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
22. ADIPOR2 ENSGALG00000035533 6523 1.574 - - 0.802 - - - - - - 0.772 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
23. NDC80 ENSGALG00000014801 3237 1.572 - - 0.772 - - - - - - 0.800 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
24. RPL26 RPL26 343071 1.57 - - 0.844 - - - - - - 0.726
25. QDPR ENSGALG00000030070 6953 1.567 - - 0.752 - - - - - - 0.815 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
26. CCNA2 ENSGALG00000011881 2574 1.56 - - 0.757 - - - - - - 0.803 cyclin A2 [Source:NCBI gene;Acc:396172]
27. WBP4 ENSGALG00000016949 5858 1.555 - - 0.731 - - - - - - 0.824 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
28. ATP6V0C ENSGALG00000009229 125870 1.554 - - 0.774 - - - - - - 0.780 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
29. BMS1 ENSGALG00000002624 8339 1.548 - - 0.788 - - - - 0.760 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
30. SPG11 ENSGALG00000008180 1890 1.545 - - 0.800 0.745 - - - - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
31. NAA30 ENSGALG00000012098 4681 1.537 - - 0.728 - - - - - - 0.809 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
32. COX7A2 ENSGALG00000015906 62347 1.537 - - - - 0.714 - - - - 0.823 cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
33. UBE2E3 ENSGALG00000020793 9517 1.532 - - 0.793 - - - - - - 0.739 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
34. SMC5 ENSGALG00000015118 1799 1.528 - - 0.773 - - - - - - 0.755 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
35. TIAR TIAR 2471 1.517 - - 0.787 - - - - - - 0.730
36. SP3 ENSGALG00000031796 8997 1.508 - - 0.731 - - - - - - 0.777 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
37. GTF2H3 ENSGALG00000023682 9914 1.507 - - 0.743 - - - - 0.764 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
38. SLC39A6 ENSGALG00000013209 1754 1.504 - - 0.721 - - - - - - 0.783 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
39. TPX2 ENSGALG00000006267 26087 1.501 - - 0.719 - - - - - - 0.782 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
40. ZNF318 ENSGALG00000034040 1758 1.48 - - - - - - - 0.767 - 0.713 zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
41. FECH ENSGALG00000038461 3491 1.467 - - 0.741 - - - - - - 0.726 ferrochelatase [Source:NCBI gene;Acc:374020]
42. NHP2L1 NHP2L1 12124 1.461 - - 0.732 - - - - 0.729 - -
43. QSER1 ENSGALG00000012030 4490 1.443 - - 0.708 - - - - - - 0.735 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
44. MAPK6 ENSGALG00000031448 28384 0.994 - - - - - - 0.994 - - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
45. HNRNPAB ENSGALG00000014381 41009 0.991 - - - - - - 0.991 - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
46. PRDX3 ENSGALG00000009369 47693 0.914 - - - - - - 0.914 - - - peroxiredoxin 3 [Source:HGNC Symbol;Acc:HGNC:9354]
47. NACAD 679 0.913 - - 0.913 - - - - - - - NAC alpha domain containing, transcript variant X1
48. AKTIP ENSGALG00000033378 1991 0.908 - - 0.908 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
49. PCYT1B 190 0.904 - - 0.904 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
50. TAF1B ENSGALG00000016437 2318 0.904 - - 0.904 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
51. TFAP2C ENSGALG00000007690 768 0.903 - - 0.903 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
52. LRRC71 ENSGALG00000027351 695 0.902 - - 0.902 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
53. GDPD4 ENSGALG00000000690 824 0.901 - - 0.901 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
54. NDC1 ENSGALG00000031606 3094 0.901 - - 0.901 - - - - - - - NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
55. PTDSS2 ENSGALG00000004300 682 0.9 - - 0.900 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
56. U4 U4 69 0.899 - - 0.899 - - - - - - -
57. GTF2H2 ENSGALG00000002399 2361 0.899 - - 0.899 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
58. CLEC16A ENSGALG00000007167 66 0.898 - - 0.898 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
59. TRIM13 ENSGALG00000017011 92 0.898 - - 0.898 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
60. RQCD1 RQCD1 110 0.897 - - 0.897 - - - - - - -
61. TUBA4A ENSGALG00000000433 1367 0.896 - - 0.896 - - - - - - - tubulin alpha 4a
62. MED12 ENSGALG00000036322 814 0.896 - - 0.896 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
63. ENSGALG00000028964 ENSGALG00000028964 46 0.895 - - 0.895 - - - - - - -
64. FBXL5 ENSGALG00000014510 245 0.895 - - 0.895 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
65. NXPE3 ENSGALG00000015344 111 0.895 - - 0.895 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
66. MRC2 ENSGALG00000000461 48 0.895 - - 0.895 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
67. ITGB4 ENSGALG00000002389 44 0.895 - - 0.895 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
68. ENSGALG00000002020 ENSGALG00000002020 183 0.895 - - 0.895 - - - - - - -
69. SZT2 ENSGALG00000028561 255 0.895 - - 0.895 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
70. TDRD6 48 0.895 - - 0.895 - - - - - - - tudor domain containing 6
71. UEVLD ENSGALG00000006342 164 0.895 - - 0.895 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
72. F2R ENSGALG00000014983 106 0.894 - - 0.894 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
73. ENSGALG00000020103 ENSGALG00000020103 64 0.894 - - 0.894 - - - - - - -
74. ENSGALG00000008689 ENSGALG00000008689 232 0.894 - - 0.894 - - - - - - -
75. PCDH17 ENSGALG00000016941 1006 0.893 - - 0.893 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
76. L3MBTL3 ENSGALG00000034030 113 0.893 - - 0.893 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
77. TTPAL ENSGALG00000004244 2734 0.893 - - 0.893 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
78. FAM134C 860 0.893 - - 0.893 - - - - - - - family with sequence similarity 134 member C
79. ENSGALG00000004703 ENSGALG00000004703 112 0.893 - - 0.893 - - - - - - -
80. ABCC3 ENSGALG00000007522 340 0.893 - - 0.893 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
81. OSGIN2 ENSGALG00000042840 83 0.892 - - 0.892 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
82. DBN1 ENSGALG00000033405 216 0.892 - - 0.892 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
83. NUDCD2 ENSGALG00000001726 6303 0.892 - - 0.892 - - - - - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
84. NUBP2 ENSGALG00000002316 3643 0.892 - - - - - - 0.892 - - - nucleotide binding protein 2 [Source:NCBI gene;Acc:416402]
85. ACADSB ENSGALG00000041417 7710 0.892 - - - - - - 0.892 - - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
86. RPS6KB1 ENSGALG00000005198 169 0.891 - - 0.891 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
87. ZNF639 ENSGALG00000005944 6387 0.891 - - 0.891 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
88. N6AMT2 N6AMT2 4703 0.891 - - - - - - 0.891 - - -
89. AIFM1 ENSGALG00000004003 10451 0.891 - - - - - - 0.891 - - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
90. CDC14B ENSGALG00000012627 110 0.891 - - 0.891 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
91. MEIS1 ENSGALG00000041626 3865 0.891 - - - - - - 0.891 - - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
92. CFC1 ENSGALG00000012623 3164 0.891 - - - - - - 0.891 - - - cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
93. CUX1_1 ENSGALG00000021636 3705 0.891 - - - - - - 0.891 - - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
94. STAM ENSGALG00000035287 7649 0.891 - - - - - - 0.891 - - - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
95. DAP ENSGALG00000013002 6815 0.891 - - - - - - 0.891 - - - death associated protein [Source:NCBI gene;Acc:420923]
96. TCTN2 ENSGALG00000023683 3596 0.891 - - 0.891 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
97. ATP2B4 ENSGALG00000003601 3746 0.891 - - - - - - 0.891 - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
98. SLC3A1 ENSGALG00000009973 608 0.891 - - 0.891 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
99. WDR92 ENSGALG00000008760 3934 0.891 - - 0.891 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
100. CHGA ENSGALG00000010820 1028 0.891 - - 0.891 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]

There are 835 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA