Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBPMS_1

Gene Name Gene ID Reads Annotation
RBPMS_1 ENSGALG00000010291 16146 RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]











Genes with expression patterns similar to RBPMS_1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBPMS_1 ENSGALG00000010291 16146 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
2. TCF21 ENSGALG00000029024 8252 1.856 - - - - - - 0.995 - 0.861 - transcription factor 21 [Source:NCBI gene;Acc:421697]
3. PRIM2 ENSGALG00000016278 5160 1.814 - - - - - - 0.997 0.817 - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
4. NANS ENSGALG00000015320 10552 1.748 - - - - - - 0.996 0.752 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
5. ZFAND5 ENSGALG00000015144 9053 1.425 - - 0.706 - - - 0.719 - - - zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
6. NUP188 ENSGALG00000043394 9288 0.998 - - - - - - 0.998 - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
7. RWDD3 ENSGALG00000038421 10909 0.998 - - - - - - 0.998 - - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
8. MSH6 ENSGALG00000008957 6396 0.998 - - - - - - 0.998 - - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
9. EMC1 ENSGALG00000003969 6876 0.998 - - - - - - 0.998 - - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
10. KDM4B ENSGALG00000034592 6711 0.998 - - - - - - 0.998 - - - lysine demethylase 4B, transcript variant X8
11. AP1G1 12403 0.998 - - - - - - 0.998 - - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
12. SMARCD2 ENSGALG00000029304 11867 0.998 - - - - - - 0.998 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
13. PSMD14 ENSGALG00000011128 13335 0.998 - - - - - - 0.998 - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
14. MIPEP ENSGALG00000017118 8666 0.998 - - - - - - 0.998 - - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
15. NUP133 ENSGALG00000011091 3804 0.998 - - - - - - 0.998 - - - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
16. SPC25 ENSGALG00000010900 14238 0.998 - - - - - - 0.998 - - - SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
17. SP4 ENSGALG00000039454 5597 0.998 - - - - - - 0.998 - - - Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
18. IFT57 ENSGALG00000015356 5540 0.997 - - - - - - 0.997 - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
19. AMFR ENSGALG00000003107 6560 0.997 - - - - - - 0.997 - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
20. USP9X ENSGALG00000016236 9419 0.997 - - - - - - 0.997 - - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
21. SSR2 ENSGALG00000000764 32190 0.997 - - - - - - 0.997 - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
22. ANAPC2 ENSGALG00000008625 8822 0.997 - - - - - - 0.997 - - - anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
23. NDUFS5 ENSGALG00000003625 27698 0.997 - - - - - - 0.997 - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
24. RNF126 ENSGALG00000042948 4724 0.997 - - - - - - 0.997 - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
25. HIBCH ENSGALG00000043307 11990 0.997 - - - - - - 0.997 - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
26. NUP153 ENSGALG00000012720 8079 0.997 - - - - - - 0.997 - - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
27. SLC12A4 ENSGALG00000034179 5674 0.997 - - - - - - 0.997 - - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
28. ZNF367 ENSGALG00000012629 3215 0.997 - - - - - - 0.997 - - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
29. OAZ2 ENSGALG00000036288 13213 0.997 - - - - - - 0.997 - - - Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
30. MRPL21 ENSGALG00000004362 20796 0.996 - - - - - - 0.996 - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
31. FBXL21 ENSGALG00000006327 2910 0.996 - - - - - - 0.996 - - - F-box and leucine rich repeat protein 21 [Source:NCBI gene;Acc:416306]
32. BTBD1 ENSGALG00000006020 14157 0.996 - - - - - - 0.996 - - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
33. SPAG1 ENSGALG00000033254 1370 0.996 - - - - - - 0.996 - - - sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
34. CDH3 5050 0.996 - - - - - - 0.996 - - - cadherin 3
35. ZNF384 ENSGALG00000032599 2369 0.996 - - - - - - 0.996 - - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
36. MAMDC2 ENSGALG00000015115 1512 0.996 - - - - - - 0.996 - - - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
37. MEX3A ENSGALG00000014016 3692 0.996 - - - - - - 0.996 - - - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
38. NTPCR ENSGALG00000011015 8652 0.996 - - - - - - 0.996 - - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
39. FAM174A ENSGALG00000026203 8369 0.995 - - - - - - 0.995 - - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
40. ACVR1 ENSGALG00000037301 6448 0.994 - - - - - - 0.994 - - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
41. HOXB2 ENSGALG00000025774 5280 0.994 - - - - - - 0.994 - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
42. HOXA4 ENSGALG00000022622 22327 0.993 - - - - - - 0.993 - - - homeobox A4 [Source:NCBI gene;Acc:395307]
43. NDUFB5 ENSGALG00000009076 32963 0.989 - - - - - - 0.989 - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
44. ZC3H15 ENSGALG00000041857 19808 0.985 - - - - - - 0.985 - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
45. EIF3A ENSGALG00000009328 39982 0.982 - - - - - - 0.982 - - - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
46. THG1L ENSGALG00000003722 7497 0.98 - - - - - - 0.980 - - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
47. ERLIN2 ENSGALG00000003092 18251 0.979 - - - - - - 0.979 - - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
48. AKAP12 ENSGALG00000036240 64617 0.978 - - - - - - 0.978 - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
49. PPP2CA ENSGALG00000006462 26306 0.976 - - - - - - 0.976 - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
50. COX6A1 ENSGALG00000007205 72629 0.957 - - - - - - 0.957 - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
51. TUBB2B ENSGALG00000012821 41535 0.887 - - - - - - 0.887 - - - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
52. ZNF207 ENSGALG00000003454 47086 0.866 - - - - - - 0.866 - - - zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]
53. LBH ENSGALG00000009052 5545 0.865 - - - - - - - - 0.865 - limb bud and heart development [Source:NCBI gene;Acc:421301]
54. LTBP3 LTBP3 13316 0.83 - - - - - - - - 0.830 -
55. GPC1 ENSGALG00000040316 13364 0.828 - - - - - - - 0.828 - - glypican 1 [Source:NCBI gene;Acc:424770]
56. TMCC2 ENSGALG00000034281 3458 0.821 - - - - - - - 0.821 - - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
57. EGFL7 ENSGALG00000043499 6272 0.821 - - - - - - - - - 0.821 EGF like domain multiple 7 [Source:NCBI gene;Acc:417137]
58. RPL10A ENSGALG00000002644 166422 0.817 - - - - - - 0.817 - - - ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
59. PODXL ENSGALG00000006409 30676 0.808 - - - - - - - - 0.808 - podocalyxin like [Source:NCBI gene;Acc:395755]
60. E2F7 ENSGALG00000031340 3430 0.791 - - - - - - - 0.791 - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
61. NEK4 ENSGALG00000041428 4473 0.79 - - - - - - - 0.790 - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
62. AZIN1 ENSGALG00000029295 11085 0.79 - - - - - - - 0.790 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
63. EMX2 ENSGALG00000009302 2103 0.789 - - - - - - - - - 0.789 empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
64. MLLT4 MLLT4 2397 0.789 - - - - - - - - 0.789 -
65. CNDP2 ENSGALG00000019514 19531 0.787 - - - - - - 0.787 - - - carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
66. DCDC2 ENSGALG00000042454 2306 0.783 - - - - - - - - - 0.783 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
67. CD99 ENSGALG00000024488 10058 0.779 - - - - - - - - 0.779 - CD99 molecule (Xg blood group) [Source:NCBI gene;Acc:418662]
68. STRA6 ENSGALG00000001449 8248 0.779 - - - - - - - 0.779 - - stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
69. TMX4 ENSGALG00000028587 3513 0.778 - - - - - - - 0.778 - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
70. SUCO ENSGALG00000003081 4116 0.775 - - - - - - - 0.775 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
71. ASTL ENSGALG00000037220 2775 0.775 - - - - - - - - - 0.775 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
72. LSG1 ENSGALG00000007058 4591 0.772 - - - - - - - 0.772 - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
73. PSMD13 ENSGALG00000043684 14720 0.771 - - - - - - - 0.771 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
74. C1orf216 ENSGALG00000002353 1886 0.77 - - - - - - - - - 0.770 chromosome 1 open reading frame 216 [Source:HGNC Symbol;Acc:HGNC:26800]
75. WWC3 ENSGALG00000034834 9392 0.77 - - - - - - - 0.770 - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
76. ELOVL6 ENSGALG00000012131 256 0.769 - - - - - - - - 0.769 - ELOVL fatty acid elongase 6 [Source:NCBI gene;Acc:428772]
77. GPX3 ENSGALG00000004521 10856 0.769 - - - - - - - - 0.769 - glutathione peroxidase 3 [Source:NCBI gene;Acc:427638]
78. E2F8 ENSGALG00000041299 1535 0.769 - - - - - - - 0.769 - - E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]
79. LOC424109 ENSGALG00000008738 3932 0.768 - - - - - - - 0.768 - - alpha-aspartyl dipeptidase
80. MT4 MT4 6244 0.768 - - - - - - - - - 0.768
81. RPA3 ENSGALG00000010700 6212 0.768 - - - - - - - 0.768 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
82. OLFML3 ENSGALG00000001956 28633 0.767 - - - - - - - - 0.767 - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
83. MSL1 ENSGALG00000030739 1290 0.766 - - - - - - - 0.766 - - male specific lethal 1 homolog
84. GID8 ENSGALG00000005700 3992 0.763 - - - - - - - - 0.763 - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
85. HELLS ENSGALG00000005451 7094 0.763 - - - - - - - 0.763 - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
86. PABPC1 ENSGALG00000030280 23934 0.76 - - - - - - - - 0.760 - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
87. GABPB1 ENSGALG00000023440 5676 0.759 - - - - - - - 0.759 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
88. C17orf59 C17orf59 5015 0.759 - - - - - - - 0.759 - -
89. TRAPPC4 ENSGALG00000007707 3568 0.758 - - - - - - - 0.758 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
90. RAB1A ENSGALG00000031582 6929 0.758 - - - - - - - - 0.758 - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
91. MDFIC ENSGALG00000026838 3881 0.758 - - - - - - - 0.758 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
92. PCBP4 ENSGALG00000027695 7937 0.755 - - - - - - - 0.755 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
93. UBFD1 ENSGALG00000006117 5242 0.754 - - - - - - - 0.754 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
94. NRIP1 ENSGALG00000015681 10711 0.754 - - - - - - - 0.754 - - nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]
95. VPS8 ENSGALG00000006704 5419 0.754 - - - - - - - 0.754 - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
96. NOC2L ENSGALG00000002222 6569 0.754 - - - - - - - 0.754 - - NOC2 like nucleolar associated transcriptional repressor [Source:NCBI gene;Acc:419433]
97. SOAT1 ENSGALG00000004205 2394 0.753 - - - - - - - - 0.753 - sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]
98. PHPT1 ENSGALG00000039061 17343 0.752 - - - - - - - 0.752 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
99. IFRD1 ENSGALG00000009448 8865 0.752 - - - - - - - 0.752 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
100. UTP15 ENSGALG00000013510 13122 0.752 - - - - - - - 0.752 - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]

There are 111 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA