Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBPMS

Gene Name Gene ID Reads Annotation
RBPMS ENSGALG00000010291 3663 RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]











Genes with expression patterns similar to RBPMS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBPMS ENSGALG00000010291 3663 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
2. TGFBR3 ENSGALG00000006038 2951 1.513 - - - - - - 0.785 0.728 - - transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
3. PTX3 ENSGALG00000028284 2984 1.412 - - - - - 0.709 0.703 - - - pentraxin 3 [Source:NCBI gene;Acc:548626]
4. ANO1 ENSGALG00000041808 5149 0.859 - - - - - - 0.859 - - - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
5. AKR1D1 ENSGALG00000012834 15183 0.854 - - - - - - 0.854 - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
6. COLEC10 ENSGALG00000033144 3436 0.826 - - - - - - 0.826 - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
7. LYVE1 ENSGALG00000005643 1230 0.822 - - - - - - - 0.822 - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
8. EPCAM ENSGALG00000008969 10014 0.813 - - - - - 0.813 - - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
9. HLX ENSGALG00000037257 5834 0.808 - - - - - - 0.808 - - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
10. COL5A2 ENSGALG00000031112 18358 0.808 - - - - - - 0.808 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
11. CHAC1 ENSGALG00000027874 242 0.808 - - - - - - - 0.808 - - ChaC glutathione specific gamma-glutamylcyclotransferase 1 [Source:NCBI gene;Acc:423209]
12. GPR20 ENSGALG00000041730 1926 0.806 - - - - - - 0.806 - - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
13. NPNT ENSGALG00000043555 3002 0.803 - - - - - - - - 0.803 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
14. MRVI1 ENSGALG00000005632 450 0.8 - - - - - - 0.800 - - - murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
15. BMP2 ENSGALG00000029301 379 0.797 - - - - - - - - - 0.797 bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
16. NCOA7 ENSGALG00000014834 1232 0.793 - - - - - - - 0.793 - - nuclear receptor coactivator 7 [Source:NCBI gene;Acc:421717]
17. VWF ENSGALG00000017272 1012 0.79 - - - - - - 0.790 - - - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
18. PKP2 ENSGALG00000012913 2547 0.789 - - - - - - 0.789 - - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
19. CDH11 ENSGALG00000039985 18212 0.788 - - - - - - 0.788 - - - cadherin 11 [Source:NCBI gene;Acc:415797]
20. KCNMA1 ENSGALG00000004980 261 0.788 - - - - - - - 0.788 - - potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
21. KIF26A ENSGALG00000011581 11285 0.785 - - - - - - 0.785 - - - kinesin family member 26A [Source:HGNC Symbol;Acc:HGNC:20226]
22. MYL9 ENSGALG00000028567 36256 0.78 - - - - - - 0.780 - - - myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
23. GPX1 ENSGALG00000028204 62935 0.779 - - - - - 0.779 - - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
24. MFGE8 ENSGALG00000006702 6976 0.778 - - - - - - - 0.778 - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
25. ANXA8 ENSGALG00000005956 479 0.777 - - - - - 0.777 - - - - annexin A8, transcript variant X1
26. ITGA8 ENSGALG00000008747 406 0.772 - - - - - - - - 0.772 - integrin subunit alpha 8 [Source:NCBI gene;Acc:396225]
27. AADAC ENSGALG00000010364 66 0.766 - - - - - - - 0.766 - - arylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]
28. RALY ENSGALG00000033696 1110 0.761 - - - - - - - 0.761 - - RALY heterogeneous nuclear ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:15921]
29. ARFGAP3 ENSGALG00000014140 4612 0.758 - - - - - - 0.758 - - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
30. MYH7B ENSGALG00000030985 199 0.755 0.755 - - - - - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
31. ACTC1 ENSGALG00000009844 20914 0.754 0.754 - - - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
32. RCSD1 ENSGALG00000040275 6581 0.752 0.752 - - - - - - - - - RCSD domain containing 1 [Source:NCBI gene;Acc:418443]
33. CDH3 5050 0.751 - - - - - 0.751 - - - - cadherin 3
34. COL6A2 ENSGALG00000039216 892 0.75 - - - - - - - - 0.750 - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
35. GPR137B ENSGALG00000010843 69 0.749 - - - - - - - 0.749 - - G protein-coupled receptor 137B [Source:NCBI gene;Acc:421511]
36. HAND1 ENSGALG00000035104 2351 0.748 - - - - - - 0.748 - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
37. RDH10 ENSGALG00000034346 15285 0.748 - - - - - - 0.748 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
38. GUCA2A ENSGALG00000027269 4340 0.748 - - - - - - 0.748 - - - guanylate cyclase activator 2A [Source:NCBI gene;Acc:419498]
39. CCDC85A ENSGALG00000043080 7624 0.747 - - 0.747 - - - - - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
40. EGFR ENSGALG00000038089 1526 0.746 - - - - - 0.746 - - - - epidermal growth factor receptor [Source:NCBI gene;Acc:396494]
41. ERAP1 ENSGALG00000014684 713 0.746 - - - - - - 0.746 - - - endoplasmic reticulum aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:18173]
42. MAB21L2 4841 0.744 - - - - - 0.744 - - - - mab-21-like 2 (C. elegans)
43. STK17A ENSGALG00000031117 454 0.742 - - - - - - 0.742 - - - serine/threonine kinase 17a [Source:NCBI gene;Acc:420775]
44. FURIN ENSGALG00000008341 2609 0.741 - - - - - - - - 0.741 - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
45. KIAA0040 ENSGALG00000030543 53 0.74 - - - - - 0.740 - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
46. KIAA1462 1612 0.739 - - - - - 0.739 - - - - KIAA1462, transcript variant X4
47. ALX1 ENSGALG00000027213 3141 0.739 - - 0.739 - - - - - - - ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]
48. AFAP1L2 ENSGALG00000008999 1305 0.737 - - - - - - 0.737 - - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
49. TRIM55 ENSGALG00000041327 1097 0.737 0.737 - - - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
50. TRIM71 ENSGALG00000019622 1633 0.737 - - - - - - - - - 0.737 tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
51. KLF8 ENSGALG00000007570 1651 0.736 - - - - - 0.736 - - - - Kruppel-like factor 8, transcript variant X6
52. GCAT ENSGALG00000012312 7906 0.733 - - - - - - - - 0.733 - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
53. TTC39A ENSGALG00000010540 1025 0.733 - - - - - 0.733 - - - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
54. PDZRN3 ENSGALG00000007819 4139 0.733 - - 0.733 - - - - - - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
55. NPC2 ENSGALG00000010237 11180 0.732 - - - - - - - 0.732 - - Niemann-Pick disease, type C2 [Source:NCBI gene;Acc:423353]
56. CD99 ENSGALG00000024488 10058 0.731 - - - - - - - 0.731 - - CD99 molecule (Xg blood group) [Source:NCBI gene;Acc:418662]
57. ELF1 ENSGALG00000016947 2769 0.73 - - - - - - - - - 0.730 E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
58. MMP15 ENSGALG00000038758 49988 0.73 - - - - - - 0.730 - - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
59. CRY2 ENSGALG00000008436 1732 0.729 - - - - - - 0.729 - - - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
60. TPM4 ENSGALG00000002563 15621 0.729 0.729 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
61. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.727 - - - - - - - 0.727 - - pseudouridylate synthase-like 1, transcript variant X8
62. RGL1 ENSGALG00000004728 3004 0.727 - - - - - - 0.727 - - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
63. HAPLN1 ENSGALG00000015627 14942 0.724 - - - - - - 0.724 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
64. GPC4 ENSGALG00000006080 56498 0.724 - - - - - - - - 0.724 - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
65. PDZK1IP1 ENSGALG00000010473 551 0.723 - - - - - - - 0.723 - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
66. FKBP7 ENSGALG00000009149 6742 0.723 - - - - - - 0.723 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
67. PITX2 ENSGALG00000042492 20419 0.722 - - - - - - 0.722 - - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
68. MYL2 ENSGALG00000004582 2245 0.722 0.722 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
69. TUBB6 ENSGALG00000031275 17690 0.722 - - - - - - 0.722 - - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
70. EF1A EF1A 2378 0.722 0.722 - - - - - - - - -
71. RBM24 ENSGALG00000012712 4138 0.722 0.722 - - - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
72. GJB1 ENSGALG00000005541 261 0.721 - - - - - 0.721 - - - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
73. ENSGALG00000008689 ENSGALG00000008689 232 0.72 - - - - - - - - 0.720 -
74. IL1R1 ENSGALG00000043044 713 0.72 - - 0.720 - - - - - - - interleukin 1 receptor type 1 [Source:NCBI gene;Acc:396481]
75. ACTN2 ENSGALG00000014463 1724 0.719 0.719 - - - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
76. GNPDA1 ENSGALG00000040594 13 0.718 - - - - - 0.718 - - - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
77. DHRS13 ENSGALG00000004009 1154 0.718 - - - - - 0.718 - - - - dehydrogenase/reductase 13 [Source:HGNC Symbol;Acc:HGNC:28326]
78. TNNC1 ENSGALG00000001459 7110 0.718 0.718 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
79. LASP-2 LASP-2 4415 0.715 0.715 - - - - - - - - -
80. LRP5 ENSGALG00000029533 385 0.715 - - - - - - - 0.715 - - LDL receptor related protein 5 [Source:NCBI gene;Acc:423114]
81. UPB1 ENSGALG00000006627 139 0.715 - - - - - - - - 0.715 - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
82. FARP1 ENSGALG00000016886 13132 0.711 - - - - - - 0.711 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
83. SLC7A9 ENSGALG00000021158 1737 0.711 - - - - - - 0.711 - - - solute carrier family 7 member 9 [Source:NCBI gene;Acc:415768]
84. NXPE3 ENSGALG00000015344 111 0.711 - - - - - 0.711 - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
85. BMP4 ENSGALG00000012429 4306 0.71 - - - - - - 0.710 - - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
86. TBX3 ENSGALG00000036043 2888 0.71 - - - - 0.710 - - - - - T-box 3 [Source:NCBI gene;Acc:374202]
87. ANGPT4 ENSGALG00000040755 489 0.709 - - - - - - - - 0.709 - angiopoietin 4 [Source:HGNC Symbol;Acc:HGNC:487]
88. WDR1 ENSGALG00000014957 15700 0.709 - - - - - - - - 0.709 - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
89. GOLPH3L ENSGALG00000014640 272 0.707 - - - - - 0.707 - - - - golgi phosphoprotein 3 like, transcript variant X2
90. SNCAIP ENSGALG00000005330 2425 0.707 - - - - - - 0.707 - - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
91. ENSGALG00000000099 ENSGALG00000000099 16 0.705 - - - - - 0.705 - - - -
92. NLN ENSGALG00000014769 95 0.705 - - - - - - - 0.705 - - neurolysin [Source:HGNC Symbol;Acc:HGNC:16058]
93. ANKRD54 ENSGALG00000012299 1588 0.704 - - - - - - - - 0.704 - ankyrin repeat domain 54, transcript variant X1
94. TNNT2 ENSGALG00000000302 568 0.704 0.704 - - - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
95. HSPB7L ENSGALG00000028183 795 0.704 0.704 - - - - - - - - - heat shock protein beta-7-like
96. ODZ2 ODZ2 1380 0.704 - - - - - - - 0.704 - -
97. GMPPA ENSGALG00000002417 10383 0.704 - - - - - - - - 0.704 - GDP-mannose pyrophosphorylase A, transcript variant X2
98. HNF1B ENSGALG00000005504 1146 0.703 - - - - - - - - 0.703 - HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
99. U3 U3 1604 0.703 - - - - - - - 0.703 - -
100. PLOD1 ENSGALG00000004531 8256 0.702 - - - - - - - 0.702 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA