Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBPMS

Gene Name Gene ID Reads Annotation
RBPMS ENSDARG00000099396 61 RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]










Genes with expression patterns similar to RBPMS

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RBPMS ENSDARG00000099396 61 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
2. si:ch211-152f6.6 si:ch211-152f6.6 278 3.262 - 0.888 0.701 - 0.732 - 0.941 - -
3. CHRNB4 ENSDARG00000101677 128 2.714 0.865 0.888 - - - - 0.961 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
4. foxb1a ENSDARG00000089042 101 2.652 0.733 1.000 - - - - 0.919 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
5. nell2b ENSDARG00000062797 854 2.552 0.821 0.888 - - - - 0.843 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
6. lrrc4.1 ENSDARG00000069402 323 2.544 0.799 1.000 - - - - 0.745 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
7. GJD2 GJD2 1351 2.473 0.772 0.835 - - - - 0.866 - -
8. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.264 0.789 0.751 - - - - 0.724 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
9. CABZ01029738.1 CABZ01029738.1 327 2.227 0.734 0.760 - - - - 0.733 - -
10. CU928222.1 ENSDARG00000097436 1662 2.181 0.752 0.711 - - - - 0.718 - -
11. plekho1a ENSDARG00000061191 98 1.874 - - - - 0.933 - 0.941 - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
12. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.855 0.869 - - - - - 0.986 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
13. slc32a1 ENSDARG00000059775 1092 1.851 - 0.986 - - - - 0.865 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
14. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.829 - 0.990 - - - - 0.839 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
15. nlgn3b ENSDARG00000062376 171 1.816 - - - - 0.965 - 0.851 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
16. scn8aa ENSDARG00000005775 792 1.8 - 0.864 - - - - 0.936 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
17. TUSC5 TUSC5 1436 1.777 - 0.872 - - - - 0.905 - -
18. SH2B2 ENSDARG00000090421 245 1.76 0.795 - - - - - 0.965 - - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
19. jag1a ENSDARG00000030289 1275 1.755 - 0.921 - - - - 0.834 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
20. dpysl5a ENSDARG00000011141 1827 1.751 - 0.883 - - - - 0.868 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
21. amph ENSDARG00000007663 599 1.747 - 0.848 - - - - 0.899 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
22. prdm12b ENSDARG00000007430 914 1.743 0.908 - - - - - 0.835 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
23. CHL1 CHL1 1553 1.739 - 0.852 - - - - 0.887 - -
24. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.737 0.889 - - - - - 0.848 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
25. thsd7ba ENSDARG00000095022 231 1.727 - 0.802 - - - - 0.925 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
26. stmn2b ENSDARG00000070537 1586 1.725 - 0.812 - - - - 0.913 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
27. fam43b ENSDARG00000070222 92 1.724 0.781 - - - - - 0.943 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
28. zgc:194621 ENSDARG00000074696 85 1.715 - 0.910 - - - - 0.805 - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
29. SEZ6 SEZ6 262 1.71 0.837 - - - - - 0.873 - -
30. gbx1 ENSDARG00000071418 871 1.703 - 0.848 - - - - 0.855 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
31. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.691 0.873 - - - - - 0.818 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
32. stx1b ENSDARG00000000503 2724 1.69 - 0.854 - - - - 0.836 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
33. rbfox3 rbfox3 1443 1.689 - 0.792 - - - - 0.897 - -
34. vsnl1a ENSDARG00000023228 1584 1.687 - 0.944 - - - - 0.743 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
35. scrt2 ENSDARG00000056175 4331 1.675 - 0.740 - - - - 0.935 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
36. DNER ENSDARG00000061031 123 1.673 0.789 - - - - - 0.884 - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
37. SKOR2 SKOR2 1041 1.667 - 0.754 - - - - 0.913 - -
38. sv2bb ENSDARG00000060711 196 1.663 - 0.869 - - - - 0.794 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
39. amigo3 ENSDARG00000074469 39 1.66 - 0.944 - - - - 0.716 - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
40. FAM171A2 FAM171A2 707 1.659 - 0.827 - - - - 0.832 - -
41. flrt1b ENSDARG00000075597 465 1.656 0.867 - - - - - 0.789 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
42. neurod neurod 1189 1.656 0.794 0.862 - - - - - - -
43. PRKAR2B ENSDARG00000036446 812 1.656 0.709 - - - - - 0.947 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
44. mapk12b ENSDARG00000006409 2246 1.655 - 0.825 - - - - 0.830 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
45. si:ch73-21g5.7 ENSDARG00000093156 9412 1.649 - 0.852 - - - - 0.797 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
46. cadpsb ENSDARG00000070567 458 1.649 - 0.944 - - - - 0.705 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
47. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.645 0.760 - - - - - 0.885 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
48. pih1d2 ENSDARG00000014849 389 1.644 - 0.701 - - - - 0.943 - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
49. si:ch211-247j9.1 ENSDARG00000079283 217 1.641 0.736 - - - - - 0.905 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
50. cnrip1a ENSDARG00000091683 1491 1.639 - 0.811 - - - - 0.828 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
51. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 1.639 0.832 0.807 - - - - - - - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
52. SNAP91 ENSDARG00000098809 556 1.637 - 0.851 - - - - 0.786 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
53. stmn2a ENSDARG00000033234 2272 1.637 - 0.815 - - - - 0.822 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
54. si:ch73-91k6.1 18 1.635 - - - - - - 0.844 - 0.791 si:ch73-91k6.1
55. ndrg1b ENSDARG00000010420 116 1.633 0.789 - - - - - 0.844 - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
56. sox21b ENSDARG00000008540 1460 1.632 - 0.818 - - - - 0.814 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
57. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.62 - 0.723 - - - - 0.897 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
58. CU693494.3 CU693494.3 169 1.619 0.744 - - - 0.875 - - - -
59. snap25a ENSDARG00000020609 4537 1.617 - 0.855 - - - - 0.762 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
60. gria2b ENSDARG00000052765 188 1.615 - 0.888 - - - - 0.727 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
61. nova2 ENSDARG00000017673 7685 1.615 - 0.844 - - - - 0.771 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
62. CNTNAP1 ENSDARG00000074524 73 1.608 0.789 - - - - - 0.819 - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
63. syt13 ENSDARG00000012306 298 1.603 - 0.764 - - - - 0.839 - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
64. gap43 ENSDARG00000099744 4114 1.598 - 0.808 - - - - 0.790 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
65. MAP1A MAP1A 847 1.598 - 0.753 - - - - 0.845 - -
66. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.595 - 0.802 - - - - 0.793 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
67. sall3b ENSDARG00000057586 982 1.587 - 0.856 - - - - 0.731 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
68. grin1a ENSDARG00000027828 1327 1.584 0.789 - - - - - 0.795 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
69. SV2B SV2B 208 1.584 - 0.848 - - - - 0.736 - -
70. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.584 0.822 - - - - - 0.762 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
71. PEX5L PEX5L 179 1.583 - 0.734 - - - - 0.849 - -
72. emilin2a ENSDARG00000061196 57 1.581 0.737 - - - - - 0.844 - - elastin microfibril interfacer 2a [Source:ZFIN;Acc:ZDB-GENE-060503-247]
73. col15a1b ENSDARG00000061848 398 1.58 - 0.748 - - 0.832 - - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
74. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.58 - 0.785 - - - - 0.795 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
75. syt12 ENSDARG00000101776 215 1.58 0.755 - - - - - 0.825 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
76. cacng8b ENSDARG00000070626 176 1.579 0.783 - - - - - 0.796 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
77. TUBB8P7_2 TUBB8P7_2 565 1.572 - - - - 0.821 - 0.751 - -
78. LRRN3 LRRN3 261 1.571 - 0.790 - - - - 0.781 - -
79. gng3 ENSDARG00000009553 2530 1.571 - 0.831 - - - - 0.740 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
80. grm1a ENSDARG00000026796 9 1.569 - - - - - - 0.844 - 0.725 glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
81. myt1b ENSDARG00000102879 5411 1.568 - 0.741 - - - - 0.827 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
82. chga ENSDARG00000008829 1086 1.568 0.867 - - - - - 0.701 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
83. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1.564 - - 0.720 - - - 0.844 - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
84. scn2b ENSDARG00000101713 796 1.561 - 0.848 - - - - 0.713 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
85. calca ENSDARG00000056590 150 1.555 0.806 - - - - - 0.749 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
86. nrarpb ENSDARG00000018958 6225 1.554 0.803 - - - - - 0.751 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
87. nptx2b ENSDARG00000045164 5 1.553 - - - 0.709 - - 0.844 - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
88. taok3b ENSDARG00000094052 36 1.549 0.705 - - - - - 0.844 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
89. lingo1a ENSDARG00000034165 179 1.543 0.736 - - - - - 0.807 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
90. dbx1a ENSDARG00000086393 3161 1.541 0.708 - - - - - 0.833 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
91. HDX ENSDARG00000079382 513 1.538 - 0.701 - - - - 0.837 - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
92. SLC5A7 SLC5A7 453 1.525 - 0.776 - - - - 0.749 - -
93. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.521 - 0.741 - - - - 0.780 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
94. msh6 ENSDARG00000104541 197 1.509 0.740 - - - 0.769 - - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
95. nes ENSDARG00000088805 2710 1.502 0.716 0.786 - - - - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
96. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.5 0.715 - - - - - 0.785 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
97. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.489 - 0.785 0.704 - - - - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
98. thsd7a thsd7a 194 1.489 - 0.785 - - - - 0.704 - -
99. rab39b rab39b 449 1.475 - 0.712 - - - - 0.763 - -
100. rtn1b ENSDARG00000021143 1682 1.465 - 0.746 - - - - 0.719 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]

There are 1428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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