Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBM6

Gene Name Gene ID Reads Annotation
RBM6 ENSGALG00000035578 1690 RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]











Genes with expression patterns similar to RBM6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBM6 ENSGALG00000035578 1690 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
2. RHOT1 ENSGALG00000003397 5149 1.956 - - - - 0.978 - - 0.978 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
3. LGALS1 ENSGALG00000012420 13993 1.935 - - - - 0.967 - - 0.968 - - galectin 1 [Source:NCBI gene;Acc:396491]
4. DENR ENSGALG00000003795 30805 1.802 - - - - 0.968 - - 0.834 - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
5. UBE2D3 ENSGALG00000012311 39831 1.73 - - - - 0.934 - - 0.796 - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
6. ENSGALG00000026930 ENSGALG00000026930 681 0.998 - - - - - - - 0.998 - -
7. PREP2 PREP2 238 0.998 - - - - 0.998 - - - - -
8. TMEM100 ENSGALG00000026465 1785 0.998 - - - - - - - 0.998 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
9. FBXW8 ENSGALG00000008207 1639 0.998 - - - - - - - 0.998 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
10. PAX-6 PAX-6 2650 0.998 - - - - - - - 0.998 - -
11. ZMYM4 ENSGALG00000002499 435 0.998 - - - - - - - 0.998 - - zinc finger MYM-type containing 4, transcript variant X1
12. SMG7 ENSGALG00000004667 707 0.998 - - - - 0.998 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
13. RAMP3 ENSGALG00000037246 1187 0.998 - - - - 0.998 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
14. FGFRL1 ENSGALG00000037525 1687 0.998 - - - - - - - 0.998 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
15. ADARB1 ENSGALG00000007527 2480 0.997 - - - - - - - 0.997 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
16. ANKRD9 ENSGALG00000011376 525 0.997 - - - - 0.997 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
17. PTK2B ENSGALG00000016564 406 0.997 - - - - 0.997 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
18. GTF2H1 ENSGALG00000042340 1553 0.997 - - - - 0.997 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
19. NAA50 ENSGALG00000033889 3551 0.997 - - - - - - - 0.997 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
20. PRDM4 ENSGALG00000012619 876 0.997 - - - - 0.997 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
21. DOCK8 481 0.997 - - - - - - - 0.997 - - dedicator of cytokinesis 8, transcript variant X1
22. BRF1 ENSGALG00000011705 3406 0.997 - - - - 0.997 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
23. MED8 ENSGALG00000009993 3095 0.997 - - - - 0.997 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
24. ANKRD17 ENSGALG00000011642 3192 0.997 - - - - - - - 0.997 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
25. NFASC ENSGALG00000031776 4264 0.997 - - - - - - - 0.997 - - neurofascin [Source:NCBI gene;Acc:419824]
26. TECPR2 ENSGALG00000011373 1063 0.997 - - - - - - - 0.997 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
27. SDCBP ENSGALG00000015436 1228 0.997 - - - - 0.997 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
28. SNCAIP ENSGALG00000005330 2425 0.996 - - - - - - - 0.996 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
29. PTPN11 ENSGALG00000004821 2658 0.996 - - - - - - - 0.996 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
30. H2AFY_1 ENSGALG00000040141 4895 0.996 - - - - - - - 0.996 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
31. YARS ENSGALG00000003563 11093 0.996 - - - - 0.996 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
32. gga-mir-1787 ENSGALG00000025542 1373 0.996 - - - - - - - 0.996 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
33. SYNE1 ENSGALG00000013505 2324 0.995 - - - - 0.995 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
34. PPT1 ENSGALG00000003936 2540 0.995 - - - - - - - 0.995 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
35. ASAP2 ENSGALG00000016419 1393 0.995 - - - - 0.995 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
36. PGS1 ENSGALG00000007181 3187 0.995 - - - - - - - 0.995 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
37. EPS15 ENSGALG00000010543 1598 0.995 - - - - - - - 0.995 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
38. PITHD1 ENSGALG00000003986 11470 0.994 - - - - 0.994 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
39. VPS13B 2293 0.994 - - - - - - - 0.994 - - vacuolar protein sorting 13 homolog B
40. ENSGALG00000006569 ENSGALG00000006569 2169 0.994 - - - - 0.994 - - - - -
41. NDUFV1 ENSGALG00000042809 6222 0.994 - - - - 0.994 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
42. PHTF1 ENSGALG00000001845 3276 0.994 - - - - 0.994 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
43. KIAA1432 KIAA1432 1792 0.994 - - - - - - - 0.994 - -
44. LZIC ENSGALG00000002616 9052 0.994 - - - - 0.994 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
45. TMF1 ENSGALG00000013408 3344 0.994 - - - - 0.994 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
46. SAP30 ENSGALG00000036252 2032 0.994 - - - - 0.994 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
47. MB21D1 2460 0.993 - - - - - - - 0.993 - - Mab-21 domain containing 1
48. ETS1 ENSGALG00000001143 7284 0.993 - - - - 0.993 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
49. BAHD1 ENSGALG00000033675 1779 0.993 - - - - 0.993 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
50. DENND5B 4077 0.993 - - - - - - - 0.993 - - DENN domain containing 5B, transcript variant X1
51. RAD54B ENSGALG00000043597 1699 0.993 - - - - 0.993 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
52. SNX14 ENSGALG00000015831 2554 0.992 - - - - 0.992 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
53. MTRF1 ENSGALG00000016951 3983 0.992 - - - - - - - 0.992 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
54. RBM34 ENSGALG00000029915 5618 0.992 - - - - 0.992 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
55. KIF11 ENSGALG00000030597 5528 0.992 - - - - 0.992 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
56. EED ENSGALG00000014060 6467 0.991 - - - - - - - 0.991 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
57. RPAP1 ENSGALG00000008624 3522 0.991 - - - - - - - 0.991 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
58. HSF2 ENSGALG00000038420 5259 0.991 - - - - 0.991 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
59. MRPL16 ENSGALG00000029419 8033 0.99 - - - - 0.990 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
60. RALGDS ENSGALG00000003412 4478 0.99 - - - - 0.990 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
61. FNDC5 ENSGALG00000003567 3328 0.99 - - - - 0.990 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
62. EDNRA ENSGALG00000010013 2472 0.99 - - - - 0.990 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
63. COQ5 ENSGALG00000007185 5614 0.99 - - - - 0.990 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
64. FAS ENSGALG00000006351 461 0.989 - - - - - - - 0.989 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
65. CDKN1B ENSGALG00000022980 4606 0.989 - - - - 0.989 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
66. CMC1 ENSGALG00000025811 3939 0.989 - - - - - - - 0.989 - - C-X9-C motif containing 1
67. DGKZ ENSGALG00000008380 5389 0.989 - - - - 0.989 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
68. IARS2 ENSGALG00000009566 4599 0.989 - - - - 0.989 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
69. TSPO2 ENSGALG00000003212 5141 0.989 - - - - 0.989 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
70. C9orf85 ENSGALG00000026001 4110 0.989 - - - - 0.989 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
71. STARD3NL ENSGALG00000033038 4851 0.989 - - - - 0.989 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
72. WDR92 ENSGALG00000008760 3934 0.988 - - - - 0.988 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
73. KCTD9 ENSGALG00000000275 3455 0.988 - - - - - - - 0.988 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
74. KNOP1 ENSGALG00000002042 6251 0.988 - - - - - - - 0.988 - - lysine-rich nucleolar protein 1, transcript variant X1
75. PRORSD1P ENSGALG00000034854 2924 0.988 - - - - - - - 0.988 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
76. ENSGALG00000027854 ENSGALG00000027854 5007 0.988 - - - - 0.988 - - - - -
77. DLL1 ENSGALG00000011182 1613 0.988 - - - - 0.988 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
78. LMAN2 ENSGALG00000033232 11740 0.988 - - - - 0.988 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
79. MED21 ENSGALG00000027435 5766 0.987 - - - - 0.987 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
80. ADD1 ENSGALG00000015664 6828 0.987 - - - - - - - 0.987 - - adducin 1 [Source:NCBI gene;Acc:422882]
81. RIOK1 ENSGALG00000012795 4658 0.986 - - - - - - - 0.986 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
82. ACAP2 ENSGALG00000007040 4182 0.986 - - - - - - - 0.986 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
83. TIMMDC1 ENSGALG00000024480 9337 0.985 - - - - 0.985 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
84. MEF2BNB MEF2BNB 5578 0.985 - - - - 0.985 - - - - -
85. LIN7C ENSGALG00000012170 5043 0.985 - - - - - - - 0.985 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
86. LOC426385 ENSGALG00000026301 2703 0.985 - - - - 0.985 - - - - - serine/threonine kinase 35-like, transcript variant X2
87. MARC1 ENSGALG00000009453 5675 0.984 - - - - 0.984 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
88. UTP6 ENSGALG00000003260 4909 0.983 - - - - 0.983 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
89. PBRM1 ENSGALG00000037455 6450 0.983 - - - - 0.983 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
90. SFXN5 ENSGALG00000016094 2678 0.983 - - - - 0.983 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
91. QARS ENSGALG00000029980 4207 0.982 - - - - - - - 0.982 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
92. DDHD1 ENSGALG00000012426 6068 0.982 - - - - - - - 0.982 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
93. VRK1 ENSGALG00000011116 4524 0.982 - - - - - - - 0.982 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
94. KDM4B ENSGALG00000034592 6711 0.982 - - - - - - - 0.982 - - lysine demethylase 4B, transcript variant X8
95. PSMG3 ENSGALG00000004203 11240 0.982 - - - - 0.982 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
96. WNK2 ENSGALG00000038850 4712 0.981 - - - - 0.981 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
97. CDH3 5050 0.98 - - - - 0.980 - - - - - cadherin 3
98. HARS ENSGALG00000035080 11602 0.979 - - - - 0.979 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
99. FUNDC2 ENSGALG00000029585 9334 0.978 - - - - 0.978 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
100. UPF3B ENSGALG00000008618 12350 0.977 - - - - 0.977 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]

There are 173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA