Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RBM6

Gene Name Gene ID Reads Annotation
RBM6 ENSDARG00000077060 3521 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]










Genes with expression patterns similar to RBM6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RBM6 ENSDARG00000077060 3521 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
2. vapal ENSDARG00000115862 3108 2.564 0.850 0.729 0.985 - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
3. hat1 ENSDARG00000034916 5712 2.493 0.740 - 0.982 - - - 0.771 - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
4. her15.2 her15.2 1701 2.358 0.736 - - - - 0.860 - - 0.762
5. phf10 ENSDARG00000070084 1210 2.338 - - - - - 0.734 0.749 - 0.855 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
6. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.227 - 0.711 - - - 0.722 - - 0.794 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
7. arcn1b ENSDARG00000031214 4529 2.149 0.704 - - - - - 0.738 - 0.707 archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
8. sdad1 ENSDARG00000105117 2819 1.813 - - 0.985 - - - - - 0.828 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
9. psmd11a ENSDARG00000060150 4529 1.801 - - 0.985 - - 0.816 - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
10. mknk2b ENSDARG00000015164 2158 1.793 0.807 - 0.986 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
11. igf2bp2a ENSDARG00000003421 2810 1.781 - - 0.986 - - - - - 0.795 insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
12. ankrd10b ENSDARG00000004771 654 1.755 0.867 - - - - - - - 0.888 ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
13. thap4 ENSDARG00000077323 434 1.748 0.869 - - - - 0.879 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
14. bahcc1 bahcc1 1934 1.745 - 0.866 - - - - - - 0.879
15. trim25l ENSDARG00000020863 292 1.743 0.876 - - - - - - - 0.867 tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
16. cd99l2 ENSDARG00000056722 5036 1.735 - - - - - 0.868 - - 0.867 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
17. slc1a3a ENSDARG00000104431 9888 1.705 - - 0.974 - - 0.731 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
18. pycr1 pycr1 1258 1.703 0.877 - - - - 0.826 - - -
19. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.697 0.875 0.822 - - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
20. usp49 ENSDARG00000000229 706 1.697 0.865 - - - - - - - 0.832 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
21. pcnxl3 pcnxl3 756 1.696 0.863 - - - - - - - 0.833
22. abca1a ENSDARG00000074635 1085 1.695 0.863 - - - - - - - 0.832 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
23. cpsf1 ENSDARG00000034178 2036 1.695 - - - - - 0.875 - - 0.820 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
24. iah1 ENSDARG00000015765 326 1.694 0.867 - - - - 0.827 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
25. pdlim5a ENSDARG00000101777 357 1.694 - - - - - 0.834 - - 0.860 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
26. commd3 ENSDARG00000045402 1601 1.693 - - - - - 0.805 0.888 - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
27. GSG2 GSG2 1162 1.69 - - - - - 0.807 - - 0.883
28. ITFG3 ITFG3 1803 1.69 - 0.704 0.986 - - - - - -
29. cdca7a ENSDARG00000077620 9345 1.689 - - 0.970 - - 0.719 - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
30. daxx ENSDARG00000000729 734 1.686 - - - - - 0.828 - - 0.858 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
31. ogdha ENSDARG00000034270 10334 1.685 - 0.720 0.965 - - - - - - oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
32. st8sia5 ENSDARG00000036584 529 1.684 - - - - - 0.819 - - 0.865 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
33. znf598 ENSDARG00000014945 1838 1.682 - 0.792 - - - - - - 0.890 zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
34. PLEKHM3 ENSDARG00000030633 496 1.679 0.880 - - - - 0.799 - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
35. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.678 0.843 - - - - 0.835 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
36. dacha ENSDARG00000010132 648 1.678 - - - 0.818 - 0.860 - - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
37. ptpn11a ENSDARG00000020334 1457 1.673 0.821 0.852 - - - - - - - protein tyrosine phosphatase, non-receptor type 11, a [Source:ZFIN;Acc:ZDB-GENE-030131-5911]
38. spryd7a ENSDARG00000052624 1059 1.668 0.867 - - - - - - - 0.801 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
39. caly ENSDARG00000036008 1002 1.667 - - - - - 0.827 - - 0.840 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
40. kri1 ENSDARG00000075380 1463 1.655 - 0.835 - 0.820 - - - - - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
41. pvrl3l pvrl3l 943 1.649 0.876 - - - - 0.773 - - -
42. phc2b_1 ENSDARG00000013224 1316 1.648 - - - - - 0.790 - - 0.858 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
43. cndp2 ENSDARG00000003931 1177 1.646 0.817 - - 0.829 - - - - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
44. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.644 0.869 - - - - 0.775 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
45. nadl1.2 695 1.644 - - - - - 0.835 - - 0.809 neural adhesion molecule L1.2, transcript variant X1
46. CASK CASK 1750 1.643 - - - - - 0.866 - - 0.777
47. kif18a ENSDARG00000008022 546 1.642 - - - - - 0.789 - - 0.853 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
48. rnf11a ENSDARG00000010442 592 1.64 0.856 - - - - 0.784 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
49. actr5 ENSDARG00000098235 237 1.639 0.884 - - - - 0.755 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
50. cenpk ENSDARG00000039616 744 1.638 - - - - - 0.774 - - 0.864 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
51. sumo3b ENSDARG00000035993 3414 1.637 0.832 - - - - - - - 0.805 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
52. rwdd ENSDARG00000068256 964 1.634 0.813 - - - - - - - 0.821 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
53. syncripl ENSDARG00000026723 3889 1.632 0.829 - - - - - - - 0.803 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
54. tet2 ENSDARG00000076928 2190 1.63 - - - - - 0.808 - - 0.822 tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
55. thsd7ba ENSDARG00000095022 231 1.625 - - - - - 0.764 - - 0.861 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
56. RBM12B ENSDARG00000079717 541 1.625 - - - 0.791 - - - - 0.834 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
57. rapgef1a ENSDARG00000043593 416 1.623 - - - 0.839 - 0.784 - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
58. RNF5 ENSDARG00000075606 1730 1.622 0.859 - - - - 0.763 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
59. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 1.618 - - - - - 0.731 - - 0.887 tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
60. hspbp1 ENSDARG00000102937 260 1.615 0.896 - - - - 0.719 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
61. zgc:113348 ENSDARG00000103795 1351 1.615 - - - - - 0.757 - - 0.858 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
62. soga1 ENSDARG00000063075 1066 1.614 - 0.785 - - - - - - 0.829 suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
63. xpr1 xpr1 840 1.612 - - - - - 0.820 - - 0.792
64. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 1.609 0.861 - - - - 0.748 - - - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
65. taz ENSDARG00000041421 985 1.609 - 0.783 - - - - - - 0.826 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
66. gmfb ENSDARG00000028327 6522 1.603 0.864 - - 0.739 - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
67. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.603 - 0.787 - - - 0.816 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
68. irx3b ENSDARG00000031138 2538 1.601 - - - - - 0.838 - - 0.763 iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
69. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.601 - 0.746 - - - 0.855 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
70. IM:7163548 IM:7163548 6540 1.601 - - - - - 0.744 - - 0.857
71. pspc1 ENSDARG00000006621 966 1.601 - - - - - 0.773 - - 0.828 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
72. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.6 0.866 - - - - 0.734 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
73. ZNF462 ENSDARG00000112909 1132 1.598 - - - - - 0.750 - - 0.848 zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
74. si:ch211-133l11.10 ENSDARG00000005626 381 1.598 - - - - - 0.751 - - 0.847 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
75. BICD2 ENSDARG00000075571 401 1.597 0.862 - - - - - 0.735 - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
76. brd3a ENSDARG00000006527 1636 1.595 0.841 - - - - - - - 0.754 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
77. st8sia2 ENSDARG00000018788 2183 1.595 - - - - - 0.729 - - 0.866 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
78. eif2s1a ENSDARG00000005827 5992 1.593 - 0.786 - - - - 0.807 - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
79. cwc25 ENSDARG00000003382 2134 1.591 - - - - - 0.753 - - 0.838 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
80. chpf2 ENSDARG00000059961 679 1.588 0.816 - - - - 0.772 - - - chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]
81. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.587 0.877 - - - - - - - 0.710 protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
82. klhdc10 ENSDARG00000007764 529 1.586 - - - - - 0.764 - - 0.822 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
83. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.585 - - - - - 0.786 - - 0.799 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
84. magt1 ENSDARG00000058062 3903 1.584 0.836 - - - - - - 0.748 - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
85. ndst3 ENSDARG00000041776 605 1.584 - - - - - 0.819 0.765 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
86. mex3b ENSDARG00000058369 1867 1.583 - - - - - 0.731 - - 0.852 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
87. mafg2 mafg2 1041 1.583 - - - - - 0.727 - - 0.856
88. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.581 - 0.834 - - - - - - 0.747 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
89. ppp1r14c ENSDARG00000077341 1587 1.58 - - - - - 0.800 - - 0.780 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
90. CABZ01087568.1 CABZ01087568.1 1487 1.579 0.767 - - - - - - - 0.812
91. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.576 - - - - - 0.714 - - 0.862 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
92. glipr2l ENSDARG00000016837 440 1.575 0.841 - - - - 0.734 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
93. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.575 0.857 - - - - 0.718 - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
94. polr2k ENSDARG00000075616 2047 1.574 0.762 - - - - - - - 0.812 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
95. map2k2b ENSDARG00000068918 676 1.574 - 0.729 - - - 0.845 - - - mitogen-activated protein kinase kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080219-34]
96. pdcd10b ENSDARG00000012591 3395 1.568 - - - - - 0.747 - - 0.821 programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
97. gdi1 ENSDARG00000056122 4106 1.566 - - - - - - 0.746 - 0.820 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
98. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.566 - - - 0.730 - - - - 0.836 post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
99. fem1b ENSDARG00000062636 474 1.559 - - - - - 0.804 0.755 - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
100. tom1 ENSDARG00000104581 1457 1.556 0.837 - - - - - - - 0.719 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]

There are 2251 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA