Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBM5

Gene Name Gene ID Reads Annotation
RBM5 30998 RNA binding motif protein 5, transcript variant X1











Genes with expression patterns similar to RBM5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBM5 30998 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 RNA binding motif protein 5, transcript variant X1
2. HABP4 ENSGALG00000012628 2894 1.864 - - - - 0.938 - - - - 0.926 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
3. CLSPN ENSGALG00000002346 2590 1.842 - - - - 0.933 - - - - 0.909 claspin [Source:NCBI gene;Acc:428223]
4. FOCAD ENSGALG00000015071 3677 1.84 - - - - 0.939 - - - - 0.901 focadhesin [Source:NCBI gene;Acc:427233]
5. TMEM128 ENSGALG00000014992 6567 1.808 - - 0.843 - - - - - - 0.965 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
6. KAT6A ENSGALG00000003641 2631 1.798 - - - - 0.934 - - - - 0.864 lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
7. TIMM21 ENSGALG00000013709 3215 1.79 - - - - 0.941 - - 0.849 - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
8. BCCIP ENSGALG00000006617 13291 1.762 - - 0.843 - 0.919 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
9. CCT8 ENSGALG00000015821 12161 1.759 - - 0.826 - - - - - - 0.933 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
10. FRMD3 ENSGALG00000012577 999 1.757 - - 0.806 - - - - - - 0.951 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
11. HNRNPLL ENSGALG00000008504 14719 1.743 - - - - 0.929 - - - - 0.814 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
12. ZNF217 ZNF217 14511 1.735 - - - - 0.918 - - - - 0.817
13. PDAP1 ENSGALG00000036552 28881 1.735 - - - - - - 0.992 - - 0.743 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
14. C9orf89 C9orf89 3056 1.723 - - - - 0.936 - - - - 0.787
15. SH3GLB1 ENSGALG00000006284 12764 1.714 - - 0.772 - 0.942 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
16. GCSH ENSGALG00000032679 29231 1.712 - - - - 0.845 - - - - 0.867 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
17. SOD2 ENSGALG00000011661 13178 1.71 - - 0.754 - 0.956 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
18. LSM6 ENSGALG00000009985 18582 1.706 - - - - 0.921 - - - - 0.785 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
19. COX7B ENSGALG00000007863 59194 1.704 - - - - - - 0.994 0.710 - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
20. ASPM ENSGALG00000032398 12784 1.702 - - 0.741 - 0.961 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
21. PCLO 249 1.702 - - - - - - - - 0.757 0.945 piccolo presynaptic cytomatrix protein
22. ALDH7A1 ENSGALG00000008229 5891 1.7 - - 0.807 - - - - - - 0.893 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
23. PPP4R2 ENSGALG00000007810 15127 1.695 - - - - - - - 0.815 - 0.880 protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
24. B3GALTL B3GALTL 4128 1.694 - - 0.766 - - - - - - 0.928
25. ZNF395 ENSGALG00000034140 1868 1.694 - - 0.791 - - - - - - 0.903 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
26. C5H14ORF166 C5H14ORF166 24176 1.691 - - 0.804 - 0.887 - - - - -
27. CRYM ENSGALG00000002484 3558 1.691 - - - - - - - - 0.732 0.959 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
28. FASTKD3 ENSGALG00000033521 1186 1.68 - - - - - - - - 0.731 0.949 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
29. MTSS1 ENSGALG00000041969 1312 1.676 - - - - - - - - 0.723 0.953 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
30. ERI1 ENSGALG00000011448 3236 1.675 - - 0.849 - - - - - - 0.826 exoribonuclease 1 [Source:NCBI gene;Acc:422629]
31. DECR1 ENSGALG00000036990 6360 1.673 - - 0.741 - 0.932 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
32. TMEM9B ENSGALG00000005908 14074 1.671 - - - - - - - 0.801 - 0.870 TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
33. SLC30A5 ENSGALG00000014787 5573 1.67 - - - - - - - 0.777 - 0.893 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
34. ZNF326 ENSGALG00000006113 15141 1.664 - - - - 0.952 - - - - 0.712 zinc finger protein 326 [Source:NCBI gene;Acc:424512]
35. SYNCRIP ENSGALG00000015830 30555 1.645 - - 0.825 - - - - - - 0.820 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
36. CRIPT ENSGALG00000010014 4311 1.645 - - - - 0.943 - - - 0.702 - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
37. NLGN1 ENSGALG00000040938 651 1.635 - - 0.829 - - - - - - 0.806 neuroligin 1 [Source:NCBI gene;Acc:424980]
38. WDR53 ENSGALG00000006395 4938 1.632 - - 0.738 - - - - - - 0.894 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
39. KIAA1551 ENSGALG00000045168 3435 1.628 - - 0.742 - - - - - - 0.886 KIAA1551, transcript variant X1
40. EIF4E2 ENSGALG00000007919 8163 1.626 - - 0.790 - - - - 0.836 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
41. GMNN ENSGALG00000013626 15838 1.616 - - - - 0.913 - - - - 0.703 geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
42. HSPE1 ENSGALG00000009070 87567 1.606 - - - - - - - 0.716 - 0.890 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
43. TXNDC12 ENSGALG00000010569 13822 1.599 - - 0.832 - - - - - - 0.767 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
44. SGTA ENSGALG00000014067 2248 1.597 - - 0.747 - - - - 0.850 - - small glutamine rich tetratricopeptide repeat containing alpha [Source:NCBI gene;Acc:426396]
45. TBPL1 ENSGALG00000013981 3710 1.596 - - 0.770 - - - - - - 0.826 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
46. DGCR2 ENSGALG00000005891 8405 1.596 - - - - - - - 0.837 - 0.759 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
47. CTSO ENSGALG00000009373 4186 1.594 - - 0.724 - - - - - - 0.870 cathepsin O [Source:NCBI gene;Acc:422410]
48. ALMS1 ENSGALG00000044620 570 1.587 - - - - - - - - 0.732 0.855 ALMS1, centrosome and basal body associated protein, transcript variant X1
49. VWF ENSGALG00000017272 1012 1.581 - - - - - - - - 0.758 0.823 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
50. ETFDH ENSGALG00000009442 7671 1.58 - - - - - - - 0.715 - 0.865 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
51. PTDSS1 ENSGALG00000030185 5515 1.578 - - 0.806 - - - - 0.772 - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
52. KLHL15 ENSGALG00000016345 1638 1.574 - - 0.837 - - - - - 0.737 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
53. FANCB ENSGALG00000016569 1193 1.574 - - - - - - - - 0.733 0.841 FA complementation group B [Source:NCBI gene;Acc:418628]
54. TMEM38B ENSGALG00000027472 2465 1.563 - - 0.850 - - - - - 0.713 - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
55. SNX2 ENSGALG00000005337 590 1.559 - - 0.806 - - - - - 0.753 - sorting nexin 2 [Source:NCBI gene;Acc:426797]
56. CCNK ENSGALG00000011138 6416 1.544 - - 0.714 - - - - - - 0.830 cyclin K [Source:NCBI gene;Acc:423446]
57. RNF4 ENSGALG00000015668 15780 1.543 - - 0.812 - - - - 0.731 - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
58. RRM1 ENSGALG00000017350 47890 1.543 - - 0.739 - 0.804 - - - - - ribonucleotide reductase catalytic subunit M1 [Source:NCBI gene;Acc:419081]
59. CCNC ENSGALG00000015471 6497 1.536 - - 0.764 - - - - - 0.772 - cyclin C [Source:NCBI gene;Acc:421791]
60. PIH1D3 ENSGALG00000004870 1365 1.503 - - 0.759 - - - - - 0.744 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
61. RUFY2 1442 1.503 - - 0.792 - - - - - 0.711 - RUN and FYVE domain containing 2, transcript variant X1
62. GNS ENSGALG00000009856 3045 1.486 - - 0.783 - - - - - 0.703 - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
63. TPM4 ENSGALG00000002563 15621 1.473 - - - - - - - - 0.725 0.748 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
64. RBM19 ENSGALG00000008289 10702 1.46 - - 0.702 - - - - - - 0.758 RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
65. GDI2 ENSGALG00000008169 67151 0.996 - - - - - - 0.996 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
66. POLR2L ENSGALG00000006841 33915 0.992 - - - - - - 0.992 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
67. UBLCP1 ENSGALG00000003672 9332 0.991 - - - - - - 0.991 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
68. FAM72A ENSGALG00000000791 17723 0.989 - - - - - - 0.989 - - - family with sequence similarity 72 member A, transcript variant X1
69. ISY1 ENSGALG00000005012 7477 0.987 - - - - - - 0.987 - - - ISY1 splicing factor homolog
70. SEC62 ENSGALG00000009379 15745 0.985 - - - - - - 0.985 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
71. MAP3K4 ENSGALG00000020003 6378 0.984 - - - - - - 0.984 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
72. HSPD1 ENSGALG00000008094 40870 0.984 - - - - - - 0.984 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
73. HINT3 ENSGALG00000044342 5674 0.984 - - - - - - 0.984 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
74. EPCAM ENSGALG00000008969 10014 0.984 - - - - - - 0.984 - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
75. ZWILCH ENSGALG00000007736 4939 0.984 - - - - - - 0.984 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
76. PSIP1 ENSGALG00000015105 8322 0.983 - - - - - - 0.983 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
77. EIF3E ENSGALG00000037067 36561 0.983 - - - - - - 0.983 - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
78. SUPT4H1 ENSGALG00000000944 8675 0.983 - - - - - - 0.983 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
79. ARL14EP ENSGALG00000012139 4690 0.982 - - - - - - 0.982 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
80. RBM38 ENSGALG00000026081 7115 0.982 - - - - - - 0.982 - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
81. ELP3 ENSGALG00000016624 4483 0.982 - - - - - - 0.982 - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
82. NAE1 ENSGALG00000038957 13777 0.981 - - - - - - 0.981 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
83. IRX2 ENSGALG00000013193 2170 0.98 - - - - - - 0.980 - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
84. MTRR ENSGALG00000039424 3197 0.98 - - - - - - 0.980 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
85. GRSF1 2406 0.979 - - - - - - 0.979 - - - G-rich RNA sequence binding factor 1, transcript variant X2
86. PPP2R3B ENSGALG00000016702 1538 0.979 - - - - - - 0.979 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
87. D1A D1A 1026 0.978 - - - - - - 0.978 - - -
88. ZFP91 ENSGALG00000007287 13681 0.977 - - - - - - 0.977 - - - ZFP91 zinc finger protein
89. C5orf22 ENSGALG00000012909 3537 0.977 - - - - - - 0.977 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
90. BMP7 ENSGALG00000007668 6645 0.975 - - - - - - 0.975 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
91. ARMC1 ENSGALG00000036567 5476 0.973 - - - - - - 0.973 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
92. PTRHD1 ENSGALG00000016610 3636 0.97 - - - - - - 0.970 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
93. PNRC1 ENSGALG00000015780 75894 0.966 - - - - - - 0.966 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
94. NARS ENSGALG00000040506 9506 0.96 - - - - - - - - - 0.960 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
95. TP53BP1 ENSGALG00000042201 708 0.959 - - - - - - - - - 0.959 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
96. PNPT1 ENSGALG00000043545 1306 0.958 - - - - - - - - - 0.958 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
97. HOTAIRM1 HOTAIRM1 4335 0.958 - - - - - - - - - 0.958
98. HSP90B1 ENSGALG00000033789 58910 0.957 - - - - - - 0.957 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
99. ARHGAP21 ENSGALG00000007721 3961 0.956 - - - - - - - - - 0.956 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
100. C14orf80 C14orf80 1921 0.955 - - - - - - - - - 0.955

There are 993 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA