Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RBM48

Gene Name Gene ID Reads Annotation
RBM48 ENSGALG00000009467 1096 RNA binding motif protein 48 [Source:NCBI gene;Acc:420555]











Genes with expression patterns similar to RBM48

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBM48 ENSGALG00000009467 1096 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 48 [Source:NCBI gene;Acc:420555]
2. CKI CKI 2845 1.59 - - 0.757 - - - - - - 0.833
3. CENPJ ENSGALG00000017148 1415 1.582 - - 0.719 - - - - - - 0.863 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
4. POLE2 ENSGALG00000012237 9023 1.504 - - - - - - 0.710 - - 0.794 DNA polymerase epsilon 2, accessory subunit [Source:NCBI gene;Acc:423567]
5. CEP76 ENSGALG00000013858 1809 1.475 - - - - - - - 0.736 - 0.739 centrosomal protein 76
6. HOXA9 ENSGALG00000028983 9298 1.461 - - - - - - 0.722 - - 0.739 homeobox A9 [Source:NCBI gene;Acc:396096]
7. CTSL2 CTSL2 7966 1.408 - - - - - - 0.703 - - 0.705
8. ARHGAP11A ENSGALG00000009731 6817 0.912 - - - - - - - - - 0.912 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
9. ENSGALG00000001919 ENSGALG00000001919 531 0.91 - - - - - - - - - 0.910
10. SOSTDC1 ENSGALG00000036836 1081 0.907 - - - - - - - - - 0.907 sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
11. PRICKLE1 ENSGALG00000009556 60 0.905 - - - - - - - - - 0.905 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
12. HDAC4 ENSGALG00000004288 2124 0.905 - - - - - - - - - 0.905 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
13. PDCD7 ENSGALG00000021027 3807 0.901 - - - - - - - - - 0.901 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
14. CCBL2 CCBL2 184 0.898 - - - - - - - - - 0.898
15. USP14 ENSGALG00000014920 18778 0.897 - - - - - - - - - 0.897 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
16. TRIM3 ENSGALG00000034004 110 0.896 - - - - - - - - - 0.896 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
17. PLCL2 ENSGALG00000011248 162 0.895 - - - - - - - - - 0.895 phospholipase C like 2 [Source:HGNC Symbol;Acc:HGNC:9064]
18. TRIM24 ENSGALG00000012823 2725 0.895 - - - - - - - - - 0.895 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
19. TCN2 3959 0.887 - - - - - - - - - 0.887 transcobalamin 2
20. YBX3 ENSGALG00000031890 819 0.887 - - - - - - - - - 0.887 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
21. SUPV3L1 ENSGALG00000004197 4141 0.886 - - - - - - - - - 0.886 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
22. ATP2B2 ENSGALG00000030908 584 0.885 - - - - - - - - - 0.885 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
23. SOS2 ENSGALG00000012273 41 0.885 - - - - - - - - - 0.885 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
24. RASSF8 ENSGALG00000014041 850 0.885 - - - - - - - - - 0.885 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
25. SLC38A1 ENSGALG00000009698 566 0.885 - - - - - - - - - 0.885 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
26. ADAMTS12 55 0.884 - - - - - - - - - 0.884 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
27. C5orf24 ENSGALG00000006371 1573 0.884 - - - - - - - - - 0.884 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
28. ZFPM2 ENSGALG00000040079 942 0.883 - - - - - - - - - 0.883 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
29. ENSGALG00000018358 ENSGALG00000018358 101 0.883 - - - - - - - - - 0.883
30. ACOX1 ENSGALG00000002159 2953 0.883 - - - - - - - - - 0.883 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
31. UBE3C ENSGALG00000006461 57 0.882 - - - - - - - - - 0.882 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
32. CNKSR3 ENSGALG00000027159 41 0.881 - - - - - - - - - 0.881 CNKSR family member 3, transcript variant X2
33. TTI1 ENSGALG00000006791 1218 0.881 - - - - - - - - - 0.881 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
34. PTPRE ENSGALG00000009823 250 0.88 - - - - - - - - - 0.880 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
35. AGMO ENSGALG00000010792 76 0.88 - - - - - - - - - 0.880 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
36. BCOR ENSGALG00000016245 85 0.88 - - - - - - - - - 0.880 BCL6 corepressor, transcript variant X8
37. WWC1 ENSGALG00000001826 4666 0.88 - - - - - - - - - 0.880 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
38. TM6SF2 ENSGALG00000029015 109 0.88 - - - - - - - - - 0.880 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
39. ENSGALG00000008594 ENSGALG00000008594 54 0.88 - - - - - - - - - 0.880
40. MAP3K8 ENSGALG00000007356 188 0.879 - - - - - - - - - 0.879 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
41. PROCR ENSGALG00000006547 645 0.878 - - - - - - - - - 0.878 protein C receptor [Source:NCBI gene;Acc:424867]
42. MAP3K3 ENSGALG00000000525 115 0.878 - - - - - - - - - 0.878 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
43. ENSGALG00000004772 ENSGALG00000004772 173 0.877 - - - - - - - - - 0.877
44. FOXP1 127 0.876 - - - - - - - - - 0.876 forkhead box P1, transcript variant X14
45. DTX2 ENSGALG00000001905 1475 0.874 - - - - - - - - - 0.874 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
46. ATL1 ENSGALG00000012339 3789 0.874 - - - - - - - - - 0.874 atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
47. SERPINB6 ENSGALG00000012866 1582 0.874 - - - - - - - - - 0.874 serpin family B member 6 [Source:NCBI gene;Acc:420895]
48. RFWD3 2315 0.874 - - - - - - - - - 0.874 ring finger and WD repeat domain 3
49. RGP1 ENSGALG00000002394 5937 0.873 - - - - - - - - - 0.873 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
50. TMEM199 ENSGALG00000023757 10781 0.873 - - - - - - - - - 0.873 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
51. RP9 ENSGALG00000035453 1186 0.873 - - - - - - - - - 0.873 retinitis pigmentosa 9 (autosomal dominant)
52. NHLRC2 ENSGALG00000008946 387 0.873 - - - - - - - - - 0.873 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
53. PHF2 ENSGALG00000039208 2003 0.873 - - - - - - - - - 0.873 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
54. VAV2 ENSGALG00000002699 503 0.872 - - - - - - - - - 0.872 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
55. NBN ENSGALG00000037686 648 0.872 - - - - - - - - - 0.872 nibrin [Source:NCBI gene;Acc:374246]
56. PMVK ENSGALG00000046656 645 0.87 - - - - - - - - - 0.870 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
57. NFKBIE ENSGALG00000044525 633 0.869 - - - - - - - - - 0.869 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
58. GRPEL2 ENSGALG00000002673 105 0.869 - - - - - - - - - 0.869 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
59. AP3B2 2331 0.867 - - - - - - - - - 0.867 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
60. CEP57 ENSGALG00000017201 524 0.867 - - - - - - - - - 0.867 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
61. GPR114 GPR114 46 0.866 - - - - - - - - - 0.866
62. ENSGALG00000027621 ENSGALG00000027621 863 0.866 - - - - - - - - - 0.866
63. PTPN11 ENSGALG00000004821 2658 0.865 - - - - - - - - - 0.865 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
64. IFNAR2 ENSGALG00000041867 1596 0.865 - - - - - - - - - 0.865 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
65. USP36 ENSGALG00000037018 783 0.865 - - - - - - - - - 0.865 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
66. TFG ENSGALG00000015299 849 0.864 - - - - - - - - - 0.864 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
67. SHPK ENSGALG00000004637 2386 0.863 - - - - - - - - - 0.863 sedoheptulokinase, transcript variant X1
68. STX6 3297 0.863 - - - - - - - - - 0.863 syntaxin 6
69. DPP6 ENSGALG00000041791 1237 0.863 - - - - - - - - - 0.863 dipeptidyl peptidase like 6 [Source:HGNC Symbol;Acc:HGNC:3010]
70. TWF2 ENSGALG00000003977 6597 0.862 - - - - - - - - - 0.862 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
71. CTK-1 CTK-1 1618 0.861 - - - - - - - - - 0.861
72. CSRNP1 ENSGALG00000027905 3141 0.86 - - - - - - - - - 0.860 cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
73. SNX30 ENSGALG00000015660 1087 0.86 - - - - - - - - - 0.860 sorting nexin family member 30 [Source:HGNC Symbol;Acc:HGNC:23685]
74. RPRD2 ENSGALG00000014656 939 0.86 - - - - - - - - - 0.860 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
75. JOSD1 ENSGALG00000041766 1445 0.859 - - - - - - - - - 0.859 Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
76. PIGW ENSGALG00000023554 951 0.858 - - - - - - - - - 0.858 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
77. MTO1 ENSGALG00000015923 4418 0.857 - - - - - - - - - 0.857 mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
78. SBNO1 ENSGALG00000003392 6731 0.857 - - - - - - - - - 0.857 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
79. STAT5 STAT5 1796 0.856 - - - - - - - - - 0.856
80. EEA1 ENSGALG00000011280 923 0.855 - - - - - - - - - 0.855 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
81. CEPT1 ENSGALG00000000142 4219 0.855 - - - - - - - - - 0.855 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
82. TYSND1 ENSGALG00000033807 716 0.855 - - - - - - - - - 0.855 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
83. TRMT44 ENSGALG00000015594 1490 0.854 - - - - - - - - - 0.854 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
84. ZNF142 ENSGALG00000011393 2078 0.854 - - - - - - - - - 0.854 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
85. STAU1 ENSGALG00000004736 3828 0.854 - - - - - - - - - 0.854 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
86. RAB34 ENSGALG00000026315 1193 0.853 - - - - - - - - - 0.853 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
87. MLST8 ENSGALG00000005878 8116 0.853 - - - - - - - - - 0.853 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
88. TNFRSF21 ENSGALG00000016719 2762 0.852 - - - - - - - - - 0.852 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
89. NNT ENSGALG00000014869 8496 0.851 - - - - - - - - - 0.851 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
90. LRP5 ENSGALG00000029533 385 0.851 - - - - - - - - - 0.851 LDL receptor related protein 5 [Source:NCBI gene;Acc:423114]
91. PDCD4 ENSGALG00000008700 574 0.85 - - - - - - - - - 0.850 programmed cell death 4 [Source:NCBI gene;Acc:374191]
92. CLIP1 ENSGALG00000004467 1058 0.85 - - - - - - - - - 0.850 CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
93. PCMTD2 ENSGALG00000005901 1833 0.849 - - - - - - - - - 0.849 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
94. ARHGAP19 ENSGALG00000007609 3655 0.849 - - - - - - - - - 0.849 Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
95. ENSGALG00000004643 ENSGALG00000004643 2297 0.849 - - - - - - - - - 0.849
96. RPGR ENSGALG00000036284 186 0.848 - - - - - - - - - 0.848 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
97. CTCF 10811 0.848 - - - - - - - - - 0.848 CCCTC-binding factor, transcript variant X2
98. VWC2 ENSGALG00000013081 492 0.846 - - - - - - - - - 0.846 von Willebrand factor C domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30200]
99. ARIH2 ENSGALG00000006956 3692 0.846 - - - - - - - - - 0.846 ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
100. LUZP1 ENSGALG00000025858 947 0.845 - - - - - - - - - 0.845 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]

There are 292 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA