Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RBM47

Gene Name Gene ID Reads Annotation
RBM47 ENSDARG00000061985 2498 RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]










Genes with expression patterns similar to RBM47

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RBM47 ENSDARG00000061985 2498 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
2. itga5 ENSDARG00000006353 1876 2.632 - - - - 0.969 0.779 0.884 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
3. emx1 ENSDARG00000039569 787 2.354 0.731 - - - - 0.826 0.797 - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
4. MDP1 MDP1 687 2.327 0.761 0.865 - - - - 0.701 - -
5. cldnh ENSDARG00000069503 2410 2.257 0.717 - 0.706 - - - 0.834 - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
6. slc43a2a ENSDARG00000036848 6798 2.196 0.708 - - - - 0.762 0.726 - - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
7. CABZ01059390.1 CABZ01059390.1 4340 1.827 - 0.894 - - 0.933 - - - -
8. klf11a ENSDARG00000030844 3972 1.772 - 0.805 - - 0.967 - - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
9. spata13 ENSDARG00000062837 5330 1.729 - - - - 0.940 - 0.789 - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
10. nrp1a ENSDARG00000102153 4154 1.728 - - - - 0.849 - 0.879 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
11. slc39a5 ENSDARG00000079525 2157 1.714 - - - - - 0.873 0.841 - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
12. npc1 ENSDARG00000017180 3724 1.712 - - - - 0.946 0.766 - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
13. dio3b ENSDARG00000095767 521 1.697 - - - - - 0.892 0.805 - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
14. snx1a ENSDARG00000071031 3975 1.685 - - - - 0.975 - 0.710 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
15. ndrg3a ENSDARG00000013087 5581 1.671 - 0.960 - - - - 0.711 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
16. nol12 ENSDARG00000038027 2288 1.665 - - - - 0.934 - 0.731 - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
17. cd2ap ENSDARG00000015224 2830 1.66 - 0.914 - - - 0.746 - - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
18. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.65 - 0.863 - - - - 0.787 - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
19. hoxc11a ENSDARG00000070351 1783 1.648 - - - - 0.946 - 0.702 - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
20. tmed1a ENSDARG00000031325 1936 1.64 - 0.824 - - - 0.816 - - - transmembrane p24 trafficking protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-229]
21. snrpc ENSDARG00000009871 9567 1.636 - 0.821 - - 0.815 - - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
22. cad ENSDARG00000041895 4977 1.624 - - - - 0.805 0.819 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
23. sgk1 ENSDARG00000025522, ENSDARG00000115600 1650 1.616 - - - - - 0.778 0.838 - - serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]
24. atp1a1a.3 ENSDARG00000039131 3267 1.609 - - - - - 0.800 0.809 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
25. cox7a3 20842 1.604 - 0.863 - - 0.741 - - - - cytochrome c oxidase subunit VIIa polypeptide 3
26. pfdn4 ENSDARG00000061228 8266 1.597 - 0.786 - - 0.811 - - - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
27. TCIRG1 TCIRG1 875 1.583 - - - - - 0.833 0.750 - -
28. clcn5 clcn5 492 1.58 - 0.856 - - - - 0.724 - -
29. cebpa ENSDARG00000036074 751 1.579 - 0.873 - - - - 0.706 - - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
30. zgc:123295 ENSDARG00000056324 361 1.579 - 0.864 - - - 0.715 - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
31. aldh1a2 ENSDARG00000053493, ENSDARG00000113122 1679 1.571 - - - - - 0.740 0.831 - - aldehyde dehydrogenase 1 family, member A2 [Source:ZFIN;Acc:ZDB-GENE-011010-3]
32. BX005001.1 BX005001.1 741 1.567 - - - - - 0.730 0.837 - -
33. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 1.56 - - - - - 0.773 0.787 - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
34. mthfd1l ENSDARG00000042221, ENSDARG00000110473 19571 1.559 - 0.853 - - - 0.706 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
35. sgms1 ENSDARG00000029621 6376 1.558 - - - - 0.798 0.760 - - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
36. PPFIBP1_1 PPFIBP1_1 2256 1.554 - - - - - 0.800 0.754 - -
37. foxf1 ENSDARG00000015399 205 1.54 - - - - - 0.822 0.718 - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
38. BX004812.1 ENSDARG00000096968 5467 1.538 - - - - - 0.818 0.720 - -
39. gyltl1b 1368 1.53 - - - - - 0.726 0.804 - - glycosyltransferase-like 1b, transcript variant X3
40. tmem88b ENSDARG00000069388 501 1.528 - - - - - 0.733 0.795 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
41. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 1.526 - - - - - 0.740 0.786 - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
42. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.525 - - - - - 0.789 0.736 - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
43. nt5dc2 ENSDARG00000059646 3878 1.521 - - - - - 0.715 0.806 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
44. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.519 0.771 - - - - - 0.748 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
45. cobl_1 ENSDARG00000091006 293 1.515 0.747 - - - - - 0.768 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
46. epas1a ENSDARG00000008697 3225 1.514 - 0.805 - - - - 0.709 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
47. foxp1b ENSDARG00000014181 2594 1.513 - - - - - 0.780 0.733 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
48. ponzr1 ENSDARG00000090444 540 1.508 - - - - - 0.755 0.753 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
49. pck1 ENSDARG00000013522 1657 1.506 - - - - - 0.744 0.762 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
50. atp1b1a ENSDARG00000013144 19744 1.505 0.748 - - - - - 0.757 - - ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
51. nav2b ENSDARG00000001879 1121 1.503 - - - - - 0.702 0.801 - - neuron navigator 2b [Source:ZFIN;Acc:ZDB-GENE-061207-13]
52. AL928724.1 ENSDARG00000097525 421 1.502 0.769 - - - - - 0.733 - -
53. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 1.495 - - 0.738 - - 0.757 - - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
54. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.495 - - - - - 0.706 0.789 - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
55. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 1.492 0.741 - - - - - 0.751 - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
56. elovl5 ENSDARG00000004979 3032 1.487 - 0.748 - - - 0.739 - - - ELOVL fatty acid elongase 5 [Source:ZFIN;Acc:ZDB-GENE-040407-2]
57. si:ch211-203c7.2 si:ch211-203c7.2 885 1.486 0.710 - - - - 0.776 - - -
58. cdh6 ENSDARG00000014522 5492 1.481 - - - - - 0.729 0.752 - - cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
59. nrp2a_1 ENSDARG00000096546 3358 1.48 - - - - - 0.731 0.749 - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
60. adcy2b ENSDARG00000014588 278 1.479 - - - - - 0.767 0.712 - - adenylate cyclase 2b (brain) [Source:ZFIN;Acc:ZDB-GENE-060503-69]
61. foxi3a ENSDARG00000055926 749 1.478 - - - - - 0.730 0.748 - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
62. atp6v0ca ENSDARG00000057853 23277 1.471 - - - - 0.757 0.714 - - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
63. cish ENSDARG00000060316 329 1.467 - - - - - 0.701 0.766 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
64. cgnl1 ENSDARG00000015805 856 1.461 - - - - - 0.706 0.755 - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
65. ctps1a ENSDARG00000030700 3868 1.456 - - - - - 0.709 0.747 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
66. tfpia ENSDARG00000034718 1257 1.455 - - - - - 0.746 0.709 - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
67. acsbg1 ENSDARG00000062077 2020 1.448 - - - - - 0.713 0.735 - - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
68. pdzk1 ENSDARG00000022261 398 1.448 0.711 - - - - - 0.737 - - PDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
69. hoxc12a ENSDARG00000070352 7409 1.431 - - - - - 0.730 0.701 - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
70. cdh17 ENSDARG00000005112 3816 1.428 0.715 - 0.713 - - - - - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
71. col16a1 ENSDARG00000009194 5600 0.981 - - - - 0.981 - - - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
72. vldlr ENSDARG00000006257 772 0.978 - - - - 0.978 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
73. ripk4 ENSDARG00000043211 775 0.978 - - - - 0.978 - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
74. trpc4apa ENSDARG00000018840 2543 0.976 - - - - 0.976 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
75. RNF111 ENSDARG00000078802 1357 0.974 - - - - 0.974 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
76. MARK3 MARK3 1767 0.974 - - - - 0.974 - - - -
77. pbx1a ENSDARG00000100494 854 0.973 - - - - 0.973 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
78. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.973 - - - - 0.973 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
79. slc48a1b ENSDARG00000026109 1427 0.973 - - - - 0.973 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
80. CABZ01073954.1 CABZ01073954.1 258 0.973 - - - - 0.973 - - - -
81. si:dkey-114e9.1 si:dkey-114e9.1 233 0.973 - - - - 0.973 - - - -
82. ARID3A ENSDARG00000070843 1613 0.973 - - - - 0.973 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
83. slc9a3r1 slc9a3r1 743 0.973 - - - - 0.973 - - - -
84. si:dkey-30k6.5 ENSDARG00000057238 617 0.972 - - - - 0.972 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
85. si:dkey-70e17.2 si:dkey-70e17.2 371 0.972 - - - - 0.972 - - - -
86. keap1b ENSDARG00000074634 1513 0.972 - - - - 0.972 - - - - kelch-like ECH-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-080508-1]
87. bin2b ENSDARG00000010255 2649 0.972 - - - - 0.972 - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
88. slc46a1 ENSDARG00000026149 297 0.972 - - - - 0.972 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
89. kcnq5a ENSDARG00000069954 492 0.972 - - - - 0.972 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
90. tmem234 ENSDARG00000078333 488 0.972 - - - - 0.972 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
91. si:dkey-228b2.5 1760 0.971 - - - - 0.971 - - - - si:dkey-228b2.5
92. ttc27 ENSDARG00000007918 1228 0.971 - - - - 0.971 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
93. errfi1 errfi1 979 0.971 - - - - 0.971 - - - -
94. nrg2a ENSDARG00000077818 854 0.971 - - - - 0.971 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
95. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.971 - - - - 0.971 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
96. C3H16orf89 C3H16orf89 449 0.971 - - - - 0.971 - - - -
97. ERO1LB ERO1LB 1433 0.97 - - - - 0.970 - - - -
98. iars2 ENSDARG00000044134 1990 0.97 - - - - 0.970 - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
99. acvr2aa ENSDARG00000011188 1454 0.97 - - - - 0.970 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
100. slc4a2b ENSDARG00000052330 1900 0.97 - - - - 0.970 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]

There are 866 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA