Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBM41

Gene Name Gene ID Reads Annotation
RBM41 ENSGALG00000004832 838 RNA binding motif protein 41 [Source:HGNC Symbol;Acc:HGNC:25617]











Genes with expression patterns similar to RBM41

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBM41 ENSGALG00000004832 838 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 41 [Source:HGNC Symbol;Acc:HGNC:25617]
2. SULT1B1 ENSGALG00000023120 523 1.521 - - - - - 0.738 - 0.783 - - sulfotransferase family cytosolic 1B member 1 [Source:NCBI gene;Acc:395227]
3. ENSGALG00000005511 ENSGALG00000005511 7 0.932 - - - - - 0.932 - - - -
4. AMY1A ENSGALG00000005147 3 0.932 - - - - - 0.932 - - - - amylase, alpha 1A; hepatic [Source:NCBI gene;Acc:414139]
5. BOK ENSGALG00000005772 117 0.932 - - - - - 0.932 - - - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
6. SLN ENSGALG00000017168 3 0.932 - - - - - 0.932 - - - - sarcolipin [Source:NCBI gene;Acc:100857277]
7. TOPAZ1 18 0.932 - - - - - 0.932 - - - - testis and ovary specific PAZ domain containing 1, transcript variant X6
8. B3GALT2 ENSGALG00000002477 13 0.932 - - - - - 0.932 - - - - beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
9. SNORA75 SNORA75 41 0.932 - - - - - 0.932 - - - -
10. BCL2L14 ENSGALG00000011544 11 0.932 - - - - - 0.932 - - - - BCL2 like 14 [Source:HGNC Symbol;Acc:HGNC:16657]
11. CD320 ENSGALG00000021688 3 0.932 - - - - - 0.932 - - - - CD320 molecule [Source:NCBI gene;Acc:420066]
12. LRIT2 ENSGALG00000002307 2 0.932 - - - - - 0.932 - - - - leucine rich repeat, Ig-like and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:23443]
13. CLDN20 ENSGALG00000027634 25 0.932 - - - - - 0.932 - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
14. ZNF362 ENSGALG00000026558 11 0.932 - - - - - 0.932 - - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
15. DUS4L ENSGALG00000023661 29 0.932 - - - - - 0.932 - - - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
16. MCMDC2 ENSGALG00000031863 3 0.932 - - - - - 0.932 - - - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
17. PLA2G1BL ENSGALG00000007236 4 0.932 - - - - - 0.932 - - - - phospholipase A2, major isoenzyme-like
18. RGR ENSGALG00000002299 17 0.932 - - - - - 0.932 - - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
19. ABLIM2 ENSGALG00000043448 48 0.932 - - - - - 0.932 - - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
20. CETP ENSGALG00000001234 18 0.932 - - - - - 0.932 - - - - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
21. ARHGEF26 ENSGALG00000010352 3 0.932 - - - - - 0.932 - - - - Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
22. ENSGALG00000025872 ENSGALG00000025872 5 0.932 - - - - - 0.932 - - - -
23. GBF1 ENSGALG00000005637 32 0.932 - - - - - 0.932 - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
24. ENSGALG00000012324 ENSGALG00000012324 4 0.932 - - - - - 0.932 - - - -
25. ABHD3 ENSGALG00000014938 9 0.932 - - - - - 0.932 - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
26. SREBP-1 SREBP-1 2 0.932 - - - - - 0.932 - - - -
27. SPEF2 ENSGALG00000023552 23 0.932 - - - - - 0.932 - - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
28. NME8 ENSGALG00000029677 2 0.932 - - - - - 0.932 - - - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
29. PRC1 ENSGALG00000012836 20 0.912 - - - - - 0.912 - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
30. LXN ENSGALG00000009651 128 0.911 - - - - - 0.911 - - - - latexin [Source:NCBI gene;Acc:771519]
31. SEPP1 SEPP1 35 0.91 - - - - - 0.910 - - - -
32. ZNF777 ENSGALG00000038657 3 0.909 - - - - - 0.909 - - - - zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
33. WDFY4 ENSGALG00000006165 22 0.9 - - - - - 0.900 - - - - WDFY family member 4 [Source:HGNC Symbol;Acc:HGNC:29323]
34. PROCR ENSGALG00000006547 645 0.897 - - - - - 0.897 - - - - protein C receptor [Source:NCBI gene;Acc:424867]
35. ENSGALG00000023694 ENSGALG00000023694 45 0.89 - - - - - 0.890 - - - -
36. TOR1B TOR1B 197 0.884 - - - - - 0.884 - - - -
37. KLHL14 ENSGALG00000036969 3 0.883 - - - - - 0.883 - - - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
38. SYT1 ENSGALG00000041094 74 0.883 - - - - - 0.883 - - - - synaptotagmin 1 [Source:NCBI gene;Acc:396083]
39. KIAA0040 ENSGALG00000030543 53 0.882 - - - - - 0.882 - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
40. ENSGALG00000000346 ENSGALG00000000346 130 0.88 - - - - - 0.880 - - - -
41. PARK2 166 0.878 - - - - - 0.878 - - - - parkin RBR E3 ubiquitin protein ligase
42. GNPDA1 ENSGALG00000040594 13 0.875 - - - - - 0.875 - - - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
43. ENSGALG00000000099 ENSGALG00000000099 16 0.873 - - - - - 0.873 - - - -
44. ATP2A3 ENSGALG00000001564 18 0.869 - - - - - 0.869 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:NCBI gene;Acc:395707]
45. SLC6A6 ENSGALG00000006425 31 0.866 - - - - - 0.866 - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
46. MTFMT ENSGALG00000007353 805 0.865 - - - - - 0.865 - - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
47. gga-mir-1600 ENSGALG00000025438 248 0.852 - - - - - 0.852 - - - - gga-mir-1600 [Source:miRBase;Acc:MI0007327]
48. CNRIP1 ENSGALG00000008757 128 0.851 - - - - - 0.851 - - - - cannabinoid receptor interacting protein 1 [Source:NCBI gene;Acc:421266]
49. RFX8 ENSGALG00000045388 17 0.85 - - - - - 0.850 - - - - RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]
50. HIPK1 ENSGALG00000001939 26 0.848 - - - - - 0.848 - - - - homeodomain interacting protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:19006]
51. NUAK1 ENSGALG00000012662 411 0.844 - - - - - 0.844 - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
52. ERBB2 ENSGALG00000031529 313 0.843 - - - - - 0.843 - - - - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
53. NOS2 ENSGALG00000038096 7 0.841 - - - - - 0.841 - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
54. IGF2R ENSGALG00000011621 81 0.84 - - - - - 0.840 - - - - insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
55. ENSGALG00000026913 ENSGALG00000026913 12 0.838 - - - - - 0.838 - - - -
56. PALM ENSGALG00000026055 8 0.838 - - - - - 0.838 - - - - paralemmin [Source:NCBI gene;Acc:101750199]
57. ADH6 ENSGALG00000020160 29 0.836 - - - - - 0.836 - - - - alcohol dehydrogenase 6 (class V) [Source:NCBI gene;Acc:395979]
58. NOG2 ENSGALG00000039817 5 0.831 - - - - - 0.831 - - - - noggin 2 [Source:NCBI gene;Acc:427689]
59. CD300A CD300A 173 0.827 - - - - - 0.827 - - - -
60. IRF-3 IRF-3 129 0.827 - - - - - 0.827 - - - -
61. SOUL ENSGALG00000012464 52 0.827 - - - - - 0.827 - - - - SOUL protein [Source:NCBI gene;Acc:395567]
62. AAGAB ENSGALG00000007887 142 0.821 - - - - - 0.821 - - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
63. GJB1 ENSGALG00000005541 261 0.82 - - - - - 0.820 - - - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
64. ENSGALG00000010101 ENSGALG00000010101 601 0.813 - - - - - 0.813 - - - -
65. C22orf39 ENSGALG00000044654 1364 0.811 - - - - - 0.811 - - - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
66. HMOX1 ENSGALG00000012550 1186 0.809 - - - - - 0.809 - - - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
67. RBM46 ENSGALG00000009278 98 0.807 - - - - - 0.807 - - - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
68. DNAH7 ENSGALG00000007841 32 0.804 - - - - - 0.804 - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
69. RELL1 ENSGALG00000014336 2950 0.803 - - - - - 0.803 - - - - RELT like 1 [Source:NCBI gene;Acc:422795]
70. R3HDML ENSGALG00000046204 145 0.803 - - - - - 0.803 - - - - R3H domain containing like [Source:HGNC Symbol;Acc:HGNC:16249]
71. GFPT2 ENSGALG00000039705 562 0.802 - - - - - 0.802 - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
72. RGS9 ENSGALG00000029610 112 0.798 - - - - - 0.798 - - - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
73. FUCA2 ENSGALG00000013773 67 0.796 - - - - - - - 0.796 - - alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
74. CBX2 ENSGALG00000023338 10 0.794 - - - - - 0.794 - - - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
75. gga-mir-6567 ENSGALG00000028837 210 0.793 - - - - - 0.793 - - - - gga-mir-6567 [Source:miRBase;Acc:MI0022384]
76. JAK2 ENSGALG00000015027 73 0.79 - - - - - 0.790 - - - - Janus kinase 2 [Source:NCBI gene;Acc:374199]
77. TMX2 ENSGALG00000007350 9052 0.79 - - - - - - - 0.790 - - thioredoxin related transmembrane protein 2, transcript variant X2
78. MAPKAP1 ENSGALG00000000977 193 0.788 - - - - - 0.788 - - - - mitogen-activated protein kinase associated protein 1 [Source:NCBI gene;Acc:395627]
79. GUCY2C ENSGALG00000011838 16 0.787 - - - - - 0.787 - - - - guanylate cyclase 2C [Source:HGNC Symbol;Acc:HGNC:4688]
80. ACTA1 ENSGALG00000011086 2543 0.786 - - - - - 0.786 - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
81. SNORD72 SNORD72 107 0.786 - - - - - 0.786 - - - -
82. NACC2 ENSGALG00000001728 91 0.785 - - - - - 0.785 - - - - NACC family member 2 [Source:NCBI gene;Acc:417128]
83. AGR3 ENSGALG00000019651 2 0.785 - - - - - 0.785 - - - - anterior gradient 3, protein disulphide isomerase family member [Source:NCBI gene;Acc:420597]
84. GPCPD1 ENSGALG00000009130 24 0.784 - - - - - 0.784 - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
85. CCDC113 20 0.778 - - - - - - - - - 0.778 coiled-coil domain containing 113, transcript variant X2
86. CDK7 ENSGALG00000014790 148 0.771 - - - - - 0.771 - - - - cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]
87. TMEM132B ENSGALG00000002742 122 0.768 - - - - - - 0.768 - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
88. ANKRD27 ENSGALG00000004671 26 0.767 - - - - - 0.767 - - - - ankyrin repeat domain 27 [Source:NCBI gene;Acc:415766]
89. VPS72 ENSGALG00000000793 329 0.764 - - - - - 0.764 - - - - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
90. MAB21L1 ENSGALG00000045052 1677 0.763 - - - - - 0.763 - - - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
91. CPE ENSGALG00000027788 153 0.762 - - - - - 0.762 - - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
92. DRAM1 ENSGALG00000012761 53 0.759 - - - - - 0.759 - - - - DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
93. MOB1A ENSGALG00000039203 240 0.757 - - - - - - - 0.757 - - MOB kinase activator 1A [Source:HGNC Symbol;Acc:HGNC:16015]
94. LOC428714 ENSGALG00000007530 41 0.756 - - - - - 0.756 - - - - LOC428714, transcript variant X2
95. SH3KBP1 ENSGALG00000016420 1739 0.756 - - - - - 0.756 - - - - SH3 domain containing kinase binding protein 1 [Source:NCBI gene;Acc:418608]
96. KPNA5 ENSGALG00000014937 28 0.753 - - - - - - - 0.753 - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
97. NECAB3 ENSGALG00000003065 417 0.75 - - - - - 0.750 - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
98. ENSGALG00000027487 ENSGALG00000027487 5 0.748 - - - - - 0.748 - - - -
99. CCDC83 ENSGALG00000013247 61 0.748 - - - - - 0.748 - - - - coiled-coil domain containing 83 [Source:HGNC Symbol;Acc:HGNC:28535]
100. EHMT1 ENSGALG00000033678 5720 0.746 - - - - - 0.746 - - - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA