Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBM38

Gene Name Gene ID Reads Annotation
RBM38 ENSGALG00000026081 7115 RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]











Genes with expression patterns similar to RBM38

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBM38 ENSGALG00000026081 7115 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
2. ELP3 ENSGALG00000016624 4483 1.844 - - - - - - 0.999 0.845 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
3. IRX2 ENSGALG00000013193 2170 1.714 - - - - - 0.714 1.000 - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
4. SUPT4H1 ENSGALG00000000944 8675 1 - - - - - - 1.000 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
5. NAE1 ENSGALG00000038957 13777 1 - - - - - - 1.000 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
6. PPP2R3B ENSGALG00000016702 1538 0.999 - - - - - - 0.999 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
7. D1A D1A 1026 0.999 - - - - - - 0.999 - - -
8. SEC62 ENSGALG00000009379 15745 0.999 - - - - - - 0.999 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
9. C5orf22 ENSGALG00000012909 3537 0.999 - - - - - - 0.999 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
10. MTRR ENSGALG00000039424 3197 0.999 - - - - - - 0.999 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
11. ZWILCH ENSGALG00000007736 4939 0.999 - - - - - - 0.999 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
12. GRSF1 2406 0.999 - - - - - - 0.999 - - - G-rich RNA sequence binding factor 1, transcript variant X2
13. MAP3K4 ENSGALG00000020003 6378 0.999 - - - - - - 0.999 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
14. PSIP1 ENSGALG00000015105 8322 0.999 - - - - - - 0.999 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
15. ARL14EP ENSGALG00000012139 4690 0.999 - - - - - - 0.999 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
16. HINT3 ENSGALG00000044342 5674 0.999 - - - - - - 0.999 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
17. EPCAM ENSGALG00000008969 10014 0.998 - - - - - - 0.998 - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
18. FAM72A ENSGALG00000000791 17723 0.998 - - - - - - 0.998 - - - family with sequence similarity 72 member A, transcript variant X1
19. ISY1 ENSGALG00000005012 7477 0.998 - - - - - - 0.998 - - - ISY1 splicing factor homolog
20. UBLCP1 ENSGALG00000003672 9332 0.994 - - - - - - 0.994 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
21. PDAP1 ENSGALG00000036552 28881 0.993 - - - - - - 0.993 - - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
22. ARMC1 ENSGALG00000036567 5476 0.993 - - - - - - 0.993 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
23. BMP7 ENSGALG00000007668 6645 0.992 - - - - - - 0.992 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
24. PTRHD1 ENSGALG00000016610 3636 0.992 - - - - - - 0.992 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
25. ZFP91 ENSGALG00000007287 13681 0.991 - - - - - - 0.991 - - - ZFP91 zinc finger protein
26. E2F6 ENSGALG00000016454 4747 0.987 - - - - - - - 0.987 - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
27. COX7B ENSGALG00000007863 59194 0.983 - - - - - - 0.983 - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
28. POLR2L ENSGALG00000006841 33915 0.982 - - - - - - 0.982 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
29. RBM5 30998 0.982 - - - - - - 0.982 - - - RNA binding motif protein 5, transcript variant X1
30. GDI2 ENSGALG00000008169 67151 0.982 - - - - - - 0.982 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
31. EIF3E ENSGALG00000037067 36561 0.977 - - - - - - 0.977 - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
32. HSPD1 ENSGALG00000008094 40870 0.977 - - - - - - 0.977 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
33. ADD3 ENSGALG00000008542 13814 0.956 - - - - - - - 0.956 - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
34. CAPZB ENSGALG00000004034 19630 0.956 - - - - - - 0.956 - - - capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
35. CDC42SE1 ENSGALG00000028119 14813 0.956 - - - - - - 0.956 - - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
36. SUMO1 ENSGALG00000008435 19847 0.941 - - - - - - - 0.941 - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
37. TYMS ENSGALG00000014897 20484 0.939 - - - - - - 0.939 - - - thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
38. PNRC1 ENSGALG00000015780 75894 0.935 - - - - - - 0.935 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
39. MLF2 ENSGALG00000014468 45953 0.935 - - - - - - 0.935 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
40. FARSB ENSGALG00000005236 10738 0.925 - - - - - - - 0.925 - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
41. HSP90B1 ENSGALG00000033789 58910 0.923 - - - - - - 0.923 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
42. RPL27A ENSGALG00000005948 363481 0.912 - - - - - - 0.912 - - - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
43. RGMA ENSGALG00000039173 12874 0.906 - - - - - 0.906 - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
44. TAX1BP3 ENSGALG00000004618 35172 0.882 - - - - - - 0.882 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
45. MKI67 ENSGALG00000025996 28136 0.876 - - - - - - - 0.876 - - marker of proliferation Ki-67, transcript variant X3
46. EIF3F ENSGALG00000005326 76059 0.87 - - - - - - 0.870 - - - eukaryotic translation initiation factor 3 subunit F
47. FKBP25 FKBP25 38434 0.857 - - - - - - 0.857 - - -
48. ADAMTSL1 1479 0.853 - - - - - - - 0.853 - - ADAMTS like 1, transcript variant X3
49. ERAL1 ENSGALG00000003995 1114 0.852 - - - - - - - 0.852 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
50. ANKS1B ENSGALG00000011549 440 0.852 - - - - - - - 0.852 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
51. NHLH1 ENSGALG00000025817 1617 0.852 - - - - - 0.852 - - - - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
52. CRADD ENSGALG00000011297 1653 0.852 - - - - - - - 0.852 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
53. PDE4B ENSGALG00000011094 1871 0.852 - - - - - - - 0.852 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
54. MAP9 ENSGALG00000020253 785 0.852 - - - - - - - 0.852 - - microtubule associated protein 9, transcript variant X7
55. FAM69B ENSGALG00000002437 1253 0.852 - - - - - - - 0.852 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
56. PIK3C2B ENSGALG00000037043 4522 0.851 - - - - - - - 0.851 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
57. CHEK2 ENSGALG00000005695 1558 0.851 - - - - - - - 0.851 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
58. XPOT ENSGALG00000009835 2953 0.851 - - - - - - - 0.851 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
59. ERICH1 ENSGALG00000031021 1495 0.851 - - - - - - - 0.851 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
60. C12orf45 C12orf45 2445 0.851 - - - - - - - 0.851 - -
61. EFNB1 ENSGALG00000036539 2706 0.85 - - - - - - - 0.850 - - ephrin B1 [Source:NCBI gene;Acc:395896]
62. FPGS ENSGALG00000042460 1749 0.85 - - - - - - - 0.850 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
63. GTF2H1 ENSGALG00000042340 1553 0.85 - - - - - - - 0.850 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
64. STXBP3 ENSGALG00000002001 1740 0.849 - - - - - - - 0.849 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
65. PDIA3 ENSGALG00000008348 4982 0.849 - - - - - - - 0.849 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
66. NEK1 ENSGALG00000009683 4305 0.849 - - - - - - - 0.849 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
67. C20ORF7 C20ORF7 2383 0.849 - - - - - - - 0.849 - -
68. DUSP3 ENSGALG00000035369 1790 0.849 - - - - - - - 0.849 - - dual specificity phosphatase 3
69. HEXA ENSGALG00000043828 4789 0.849 - - - - - - - 0.849 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
70. MED1 ENSGALG00000001708 9556 0.847 - - - - - - - 0.847 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
71. UQCC UQCC 5913 0.846 - - - - - - - 0.846 - -
72. VPS39 ENSGALG00000008991 4018 0.845 - - - - - - - 0.845 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
73. FABP3 ENSGALG00000037050 873 0.845 - - - - - - - 0.845 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
74. WDR92 ENSGALG00000008760 3934 0.844 - - - - - - - 0.844 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
75. IFT81 ENSGALG00000003854 2534 0.844 - - - - - - - 0.844 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
76. PDS5B ENSGALG00000017070 3998 0.844 - - - - - - - 0.844 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
77. ATOX1 ENSGALG00000004176 16486 0.844 - - - - - - - 0.844 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
78. ARPC5L ENSGALG00000001014 5642 0.843 - - - - - - - 0.843 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
79. ANKRD49 ENSGALG00000017210 3247 0.843 - - - - - - - 0.843 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
80. BCL2L1 ENSGALG00000006211 2490 0.843 - - - - - - - 0.843 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
81. FZD6 ENSGALG00000030626 3336 0.843 - - - - - - - 0.843 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
82. GRM4 ENSGALG00000002840 2250 0.841 - - - - - 0.841 - - - - glutamate receptor, metabotropic 4, transcript variant X2
83. SOX9 ENSGALG00000004386 14802 0.84 - - - - - - - 0.840 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
84. LDHB ENSGALG00000035836 169726 0.839 - - - - - 0.839 - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
85. DCTN6 ENSGALG00000010298 7507 0.839 - - - - - - - 0.839 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
86. TBC1D1 ENSGALG00000039380 4423 0.837 - - - - - - - 0.837 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
87. PES1 ENSGALG00000007778 12248 0.837 - - - - - - - 0.837 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
88. C4orf46 ENSGALG00000009432 3255 0.835 - - - - - - - 0.835 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
89. EIF1AY ENSGALG00000016410 6431 0.835 - - - - - - - 0.835 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
90. ZEB1 ENSGALG00000007260 9277 0.833 - - - - - - - 0.833 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
91. SDHA ENSGALG00000013167 6509 0.832 - - - - - - - 0.832 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
92. EMC7 ENSGALG00000009637 4969 0.832 - - - - - - - 0.832 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
93. NES ENSGALG00000013239 1708 0.829 - - - - - 0.829 - - - - nestin [Source:NCBI gene;Acc:395890]
94. CABIN1 ENSGALG00000006363 4415 0.828 - - - - - - - 0.828 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
95. UBE2B ENSGALG00000032664 6069 0.825 - - - - - - - 0.825 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
96. C1QTNF3 ENSGALG00000027887 8646 0.822 - - - - - 0.822 - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
97. TAB2 ENSGALG00000012356 3467 0.817 - - - - - - - 0.817 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
98. TRAP1 ENSGALG00000039951 11323 0.816 - - - - - - - 0.816 - - TNF receptor associated protein 1 [Source:NCBI gene;Acc:416666]
99. CMPK CMPK 9569 0.816 - - - - - - - 0.816 - -
100. SURF6 ENSGALG00000038413 11178 0.813 - - - - - - - 0.813 - - surfeit 6 [Source:NCBI gene;Acc:417160]

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA