Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RBM27

Gene Name Gene ID Reads Annotation
RBM27 ENSGALG00000007516 3909 RNA binding motif protein 27, transcript variant X3











Genes with expression patterns similar to RBM27

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBM27 ENSGALG00000007516 3909 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 27, transcript variant X3
2. C1H12ORF23 C1H12ORF23 13234 1.772 - - - - - - 0.785 0.987 - -
3. WDR53 ENSGALG00000006395 4938 1.691 - - - - - - 0.727 0.964 - - WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
4. CCDC93 ENSGALG00000012129 2405 1.647 - - - - - - 0.737 0.910 - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
5. ECI1 ENSGALG00000031563 11326 1.617 - - - - - - 0.787 0.830 - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
6. ROMO1 ENSGALG00000027416 9560 1.613 - - - - - - 0.792 0.821 - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
7. LARP7 ENSGALG00000012048 8393 1.504 - - - - - - 0.767 0.737 - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
8. EIF2S1 ENSGALG00000009565 63906 1.46 - - - - - - 0.749 0.711 - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
9. TSPO2 ENSGALG00000003212 5141 0.994 - - - - - - - 0.994 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
10. FOPNL ENSGALG00000006532 2922 0.993 - - - - - - - 0.993 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
11. GPR180 ENSGALG00000016897 1545 0.992 - - - - - - - 0.992 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
12. MAMLD1 ENSGALG00000009098 1231 0.992 - - - - - - - 0.992 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
13. CDCA2 ENSGALG00000045842 2236 0.992 - - - - - - - 0.992 - - cell division cycle associated 2, transcript variant X3
14. SORD ENSGALG00000031408 2119 0.992 - - - - - - - 0.992 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
15. RNF2 ENSGALG00000037219 2299 0.992 - - - - - - - 0.992 - - ring finger protein 2 [Source:HGNC Symbol;Acc:HGNC:10061]
16. ROR1 ENSGALG00000011019 2155 0.992 - - - - - - - 0.992 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
17. RAD18 ENSGALG00000008368 7214 0.992 - - - - - - - 0.992 - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
18. EDEM2 ENSGALG00000003128 3338 0.992 - - - - - - - 0.992 - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
19. ENSGALG00000023314 ENSGALG00000023314 6331 0.992 - - - - - - - 0.992 - -
20. OGG1 ENSGALG00000006651 1320 0.992 - - - - - - - 0.992 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
21. ARL6IP4 ENSGALG00000003682 2467 0.992 - - - - - - - 0.992 - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
22. CDC26 ENSGALG00000026095 3491 0.991 - - - - - - - 0.991 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
23. RASSF2 ENSGALG00000030432 4822 0.991 - - - - - - - 0.991 - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
24. RNF19A ENSGALG00000038772 380 0.991 - - - - - - - 0.991 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
25. H1F0 ENSGALG00000044240 1206 0.991 - - - - - - - 0.991 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
26. MYL2 ENSGALG00000004582 2245 0.991 - - - - - - - 0.991 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
27. XRCC2 ENSGALG00000026865 2214 0.991 - - - - - - - 0.991 - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
28. XPNPEP3 ENSGALG00000012003 2253 0.991 - - - - - - - 0.991 - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
29. UBE4A ENSGALG00000031134 5851 0.991 - - - - - - - 0.991 - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
30. EMCN EMCN 2637 0.99 - - - - - - - 0.990 - -
31. MPP7 ENSGALG00000007408 2485 0.99 - - - - - - - 0.990 - - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
32. NARG2 NARG2 2294 0.99 - - - - - - - 0.990 - -
33. ENSGALG00000027854 ENSGALG00000027854 5007 0.99 - - - - - - - 0.990 - -
34. ODF2 ENSGALG00000004767 3972 0.989 - - - - - - - 0.989 - - outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
35. CCDC12 ENSGALG00000005487 8190 0.989 - - - - - - - 0.989 - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
36. TWISTNB ENSGALG00000010863 7563 0.989 - - - - - - - 0.989 - - TWIST neighbor [Source:NCBI gene;Acc:420603]
37. HSPA14 ENSGALG00000035201 7372 0.985 - - - - - - - 0.985 - - heat shock protein family A (Hsp70) member 14
38. ALDH4A1 ENSGALG00000042184 9432 0.984 - - - - - - - 0.984 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
39. USP20 ENSGALG00000041104 3186 0.984 - - - - - - - 0.984 - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
40. C26H6ORF125 ENSGALG00000002881 15827 0.982 - - - - - - - 0.982 - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
41. TRABD ENSGALG00000030705 6577 0.982 - - - - - - - 0.982 - - TraB domain containing [Source:NCBI gene;Acc:417746]
42. PHKG1 ENSGALG00000002485 15214 0.979 - - - - - - - 0.979 - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
43. MTFR1 ENSGALG00000038385 9419 0.973 - - - - - - - 0.973 - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
44. KCTD2 ENSGALG00000007934 15085 0.972 - - - - - - - 0.972 - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
45. SNF8 ENSGALG00000001309 7398 0.967 - - - - - - - 0.967 - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
46. CZH9ORF100 CZH9ORF100 4268 0.966 - - - - - - - 0.966 - -
47. SEC22B ENSGALG00000039704 16080 0.966 - - - - - - - 0.966 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
48. PPIF ENSGALG00000004809 5586 0.965 - - - - - - - 0.965 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
49. GTF2B ENSGALG00000006205 6950 0.963 - - - - - - - 0.963 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
50. SOD2 ENSGALG00000011661 13178 0.951 - - - - - - - 0.951 - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
51. HSF2BP ENSGALG00000016202 1696 0.95 - - - - - - - 0.950 - - heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:HGNC:5226]
52. SAR1A ENSGALG00000004431 28833 0.948 - - - - - - - 0.948 - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
53. WDR43 ENSGALG00000032529 12235 0.944 - - - - - - - 0.944 - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
54. NIPSNAP3L ENSGALG00000027334 7514 0.938 - - - - - - - 0.938 - - nipsnap homolog 3-like
55. ANXA11 ENSGALG00000043826 5189 0.93 - - - - - - - 0.930 - - annexin A11 [Source:NCBI gene;Acc:423637]
56. TMEM183A ENSGALG00000000223 6915 0.924 - - - - - - - 0.924 - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
57. GTF2E1 ENSGALG00000042320 7712 0.92 - - - - - - - 0.920 - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
58. THG1L ENSGALG00000003722 7497 0.915 - - - - - - - 0.915 - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
59. SLC27A4 ENSGALG00000004965 3278 0.911 - - - - - - - 0.911 - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
60. STX7 ENSGALG00000034374 4695 0.91 - - - - - - - 0.910 - - syntaxin 7 [Source:NCBI gene;Acc:426930]
61. MLYCD ENSGALG00000005494 1882 0.909 - - - - - - - 0.909 - - malonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]
62. PLOD2 ENSGALG00000006783 22789 0.904 - - - - - - - 0.904 - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
63. RAB2A ENSGALG00000015450 990 0.902 - - - - - - - 0.902 - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
64. EIF2B3 ENSGALG00000010140 7992 0.9 - - - - - - - 0.900 - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
65. CHERP ENSGALG00000003824 11489 0.896 - - - - - - - 0.896 - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
66. HERC2 ENSGALG00000016739 9900 0.883 - - - - - - - 0.883 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
67. NDUFB3 ENSGALG00000008239 15511 0.883 - - - - - - 0.883 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
68. NUP62 ENSGALG00000004856 5799 0.871 - - - - - - - 0.871 - - nucleoporin 62
69. MPHOSPH6 ENSGALG00000031983 17073 0.866 - - - - - - - 0.866 - - M-phase phosphoprotein 6 [Source:NCBI gene;Acc:415811]
70. HDLBP ENSGALG00000005823 24636 0.865 - - - - - - - 0.865 - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
71. CNOT8 ENSGALG00000003950 8271 0.857 - - - - - - 0.857 - - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
72. TSG101 ENSGALG00000006312 8289 0.849 - - - - - - 0.849 - - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
73. AGPAT3 ENSGALG00000031932 6903 0.846 - - - - - - - 0.846 - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
74. CDC7 ENSGALG00000006051 3996 0.845 - - - - - - 0.845 - - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
75. PPCS ENSGALG00000004882 5759 0.843 - - - - - - 0.843 - - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
76. CHMP3 ENSGALG00000015805 11581 0.843 - - - - - - 0.843 - - - charged multivesicular body protein 3
77. UBE2J2 ENSGALG00000001848 6527 0.839 - - - - - - 0.839 - - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
78. RABL3 ENSGALG00000014949 2850 0.836 - - - - - - 0.836 - - - RAB, member of RAS oncogene family like 3 [Source:NCBI gene;Acc:418329]
79. ENSGALG00000009516 ENSGALG00000009516 5256 0.834 - - - - - - 0.834 - - -
80. PREP ENSGALG00000015405 17050 0.834 - - - - - - 0.834 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
81. VATB VATB 13756 0.829 - - - - - - 0.829 - - -
82. GABPB1 ENSGALG00000023440 5676 0.826 - - - - - - 0.826 - - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
83. FARSB ENSGALG00000005236 10738 0.822 - - - - - - 0.822 - - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
84. CHTF8 ENSGALG00000000632 7230 0.817 - - - - - - 0.817 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
85. RIOK2 ENSGALG00000015288 6280 0.815 - - - - - - 0.815 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
86. EBNA1BP2 ENSGALG00000009045 17453 0.815 - - - - - - 0.815 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
87. ARID2 ENSGALG00000033074 3461 0.814 - - - - - - 0.814 - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
88. SLC35F1 ENSGALG00000029011 14728 0.814 - - - - - - - 0.814 - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
89. TRMT5 ENSGALG00000011904 1857 0.809 - - - - - - 0.809 - - - tRNA methyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:23141]
90. SUCLG2 ENSGALG00000007652 9688 0.809 - - - - - - 0.809 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
91. MRPL30 ENSGALG00000016760 16965 0.809 - - - - - - 0.809 - - - mitochondrial ribosomal protein L30
92. RABGGTB ENSGALG00000011388 11654 0.808 - - - - - - 0.808 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
93. NABP1 ENSGALG00000025884 4195 0.807 - - - - - - 0.807 - - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
94. NOP58 ENSGALG00000008454 34630 0.807 - - - - - - 0.807 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
95. NFYB ENSGALG00000041193 6158 0.806 - - - - - - 0.806 - - - nuclear transcription factor Y subunit beta [Source:NCBI gene;Acc:396205]
96. PFDN1 ENSGALG00000000946 18822 0.805 - - - - - - 0.805 - - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
97. SPINZ SPINZ 10341 0.804 - - - - - - 0.804 - - -
98. FRZB ENSGALG00000002763 14833 0.803 - - - - - - - 0.803 - - frizzled related protein [Source:NCBI gene;Acc:395545]
99. CENPW ENSGALG00000027454 7517 0.802 - - - - - - 0.802 - - - centromere protein W [Source:NCBI gene;Acc:421716]
100. PSMD3 ENSGALG00000033162 25615 0.8 - - - - - - 0.800 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]

There are 270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA