Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBM20

Gene Name Gene ID Reads Annotation
RBM20 ENSGALG00000008697 20 RNA binding motif protein 20 [Source:HGNC Symbol;Acc:HGNC:27424]











Genes with expression patterns similar to RBM20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBM20 ENSGALG00000008697 20 5 - - 1.000 1.000 1.000 1.000 - 1.000 - - RNA binding motif protein 20 [Source:HGNC Symbol;Acc:HGNC:27424]
2. TMPRSS7 ENSGALG00000015389 12 1 - - - - - - - 1.000 - - transmembrane serine protease 7 [Source:HGNC Symbol;Acc:HGNC:30846]
3. C19orf44 C19orf44 24 0.965 - - - - - - - 0.965 - -
4. KCNJ9 ENSGALG00000009935 69 0.962 - - - - - 0.962 - - - - potassium inwardly-rectifying channel, subfamily J, member 9
5. DIRAS2 ENSGALG00000005323 11 0.953 - - - - - - - 0.953 - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
6. ENSGALG00000027427 ENSGALG00000027427 16 0.953 - - - - - - - 0.953 - -
7. KIAA1045 KIAA1045 23 0.953 - - - - - - - 0.953 - -
8. PSD ENSGALG00000042551 6 0.953 - - - - - - - 0.953 - - pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]
9. ENSGALG00000016962 ENSGALG00000016962 6 0.953 - - - - - - - 0.953 - -
10. MAF ENSGALG00000026258 45 0.953 - - - - - - - 0.953 - - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
11. SFMBT1 ENSGALG00000001753 10 0.953 - - - - - - - 0.953 - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
12. GLTSCR1L 18 0.953 - - - - - - - 0.953 - - GLTSCR1 like, transcript variant X4
13. KCNRG ENSGALG00000017012 4 0.953 - - - - - - - 0.953 - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
14. ENSGALG00000028328 ENSGALG00000028328 23 0.953 - - - - - - - 0.953 - -
15. ENSGALG00000019568 ENSGALG00000019568 25 0.953 - - - - - - - 0.953 - -
16. DLL4 ENSGALG00000008514 3 0.953 - - - - - - - 0.953 - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
17. ENSGALG00000019077 ENSGALG00000019077 49 0.953 - - - - - - - 0.953 - -
18. ARL15 ENSGALG00000014911 13 0.952 - - - - - - - 0.952 - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
19. OIP5 ENSGALG00000008579 27 0.952 - - - - - - - 0.952 - - Opa interacting protein 5 [Source:NCBI gene;Acc:423212]
20. C2orf50 ENSGALG00000046449 17 0.952 - - - - - - - 0.952 - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
21. PCBP3 ENSGALG00000004394 5 0.952 - - - - - - - 0.952 - - poly(rC) binding protein 3, transcript variant X32
22. UPF3A ENSGALG00000016815 48 0.952 - - - - - - - 0.952 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
23. MAL ENSGALG00000008552 4 0.945 - - - - - - - 0.945 - - mal, T cell differentiation protein [Source:NCBI gene;Acc:416707]
24. SLC7A11 ENSGALG00000009758 104 0.94 - - - - - - - 0.940 - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
25. IL2RG ENSGALG00000005638 21 0.924 - - - - - - - 0.924 - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
26. SEC61A1 ENSGALG00000005966 9 0.923 - - - - - - - 0.923 - - Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
27. GAK ENSGALG00000015352 99 0.923 - - - - - - - 0.923 - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
28. AKR AKR 68 0.914 - - - - - - - 0.914 - -
29. UBAP1L ENSGALG00000007333 39 0.91 - - - - - 0.910 - - - - ubiquitin associated protein 1 like [Source:NCBI gene;Acc:769261]
30. DSL1 DSL1 113 0.896 - - - - - - - 0.896 - -
31. HAO1 ENSGALG00000008845 22 0.896 - - - - - - - 0.896 - - hydroxyacid oxidase 1 [Source:NCBI gene;Acc:416728]
32. MYOM2 ENSGALG00000016342 62 0.89 - - - - - - - 0.890 - - myomesin 2 [Source:NCBI gene;Acc:396034]
33. MUSTN1 ENSGALG00000001709 713 0.889 - - - - - - - 0.889 - - musculoskeletal, embryonic nuclear protein 1 [Source:NCBI gene;Acc:404773]
34. ENSGALG00000028720 ENSGALG00000028720 10 0.889 - - - - - - - 0.889 - -
35. PLCXD3 ENSGALG00000014845 247 0.887 - - - - - - - 0.887 - - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
36. GLA ENSGALG00000004948 97 0.882 - - - - - 0.882 - - - - galactosidase alpha [Source:HGNC Symbol;Acc:HGNC:4296]
37. MIB2 ENSGALG00000001473 67 0.866 - - - - - - - 0.866 - - mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:419408]
38. NFAT5 ENSGALG00000039300 29 0.857 - - - - - - - 0.857 - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
39. AP3M1 ENSGALG00000005070 712 0.851 - - - - - - - 0.851 - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
40. GIT1 ENSGALG00000023703 174 0.843 - - - - - 0.843 - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
41. MTX3 ENSGALG00000014807 127 0.841 - - - - - 0.841 - - - - metaxin 3 [Source:NCBI gene;Acc:427176]
42. CFAP221 ENSGALG00000012100 74 0.839 - - - - - 0.839 - - - - cilia and flagella associated protein 221 [Source:HGNC Symbol;Acc:HGNC:33720]
43. ZC3H12B ENSGALG00000039391 39 0.82 - - - - - - - 0.820 - - zinc finger CCCH-type containing 12B [Source:HGNC Symbol;Acc:HGNC:17407]
44. NSMCE1 ENSGALG00000006307 413 0.818 - - - - - - - 0.818 - - NSE1 homolog, SMC5-SMC6 complex component [Source:HGNC Symbol;Acc:HGNC:29897]
45. FIGF FIGF 576 0.817 - - - - - - - 0.817 - -
46. MTR ENSGALG00000014464 90 0.81 - - - - - - - 0.810 - - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:NCBI gene;Acc:422069]
47. TMC5 ENSGALG00000006911 12 0.81 - - - - - - - 0.810 - - transmembrane channel like 5 [Source:HGNC Symbol;Acc:HGNC:22999]
48. PEX7 ENSGALG00000013874 34 0.806 - - - - - 0.806 - - - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
49. PHOSPHO1 ENSGALG00000033683 22 0.803 - - - - - - - 0.803 - - phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
50. ALKBH5 ENSGALG00000043693 350 0.797 - - - - - - - 0.797 - - Gallus gallus alkB homolog 5, RNA demethylase (ALKBH5), mRNA. [Source:RefSeq mRNA;Acc:NM_001257201]
51. NPY2R ENSGALG00000009280 29 0.797 - - - - - - - 0.797 - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
52. AGTPBP1 ENSGALG00000012595 324 0.795 - - - - - 0.795 - - - - ATP/GTP binding protein 1 [Source:NCBI gene;Acc:427460]
53. NCOA3 ENSGALG00000004570 243 0.792 - - - - - - - 0.792 - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
54. AQP8 10 0.79 - - - - - - - 0.790 - - aquaporin 8
55. POC5 ENSGALG00000014960 123 0.78 - - - - - - - 0.780 - - POC5 centriolar protein, transcript variant X1
56. FAM161A ENSGALG00000008810 36 0.779 - - - - - - - 0.779 - - FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
57. MANSC1 ENSGALG00000038710 430 0.773 - - - - - 0.773 - - - - MANSC domain containing 1 [Source:NCBI gene;Acc:426428]
58. C20H20ORF4 C20H20ORF4 666 0.771 - - - - - - - 0.771 - -
59. UGGT2 ENSGALG00000016893 206 0.758 - - - - - - - 0.758 - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:NCBI gene;Acc:418785]
60. MTMR7 13 0.749 - - - - - - - 0.749 - - myotubularin related protein 7, transcript variant X1
61. TXLNG ENSGALG00000016547 503 0.746 - - - - - - - 0.746 - - taxilin gamma [Source:HGNC Symbol;Acc:HGNC:18578]
62. ENSGALG00000006277 ENSGALG00000006277 284 0.743 - - - - - - - 0.743 - -
63. CCDC6 ENSGALG00000003165 93 0.741 - - - - - - - 0.741 - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
64. FOXK1 ENSGALG00000004460 1483 0.729 - - - - - 0.729 - - - - forkhead box K1 [Source:HGNC Symbol;Acc:HGNC:23480]
65. RUNX3 ENSGALG00000043372 43 0.725 - - - - - - - 0.725 - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
66. SLC35B3 ENSGALG00000012778 30 0.723 - - - - - - - 0.723 - - solute carrier family 35 member B3 [Source:HGNC Symbol;Acc:HGNC:21601]
67. KCNH7 ENSGALG00000038543 20 0.722 - - - - - 0.722 - - - - potassium voltage-gated channel subfamily H member 7 [Source:HGNC Symbol;Acc:HGNC:18863]
68. LPHN3 LPHN3 41 0.722 - - - - - 0.722 - - - -
69. VCAM1 ENSGALG00000005257 102 0.722 - - - - - 0.722 - - - - vascular cell adhesion molecule 1, transcript variant X1
70. ACER2 ENSGALG00000015081 18 0.722 - - - - - 0.722 - - - - alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
71. ENSGALG00000026267 ENSGALG00000026267 1 0.722 - - - - - 0.722 - - - -
72. IL23R IL23R 25 0.722 - - - - - 0.722 - - - -
73. ALDH8A1 ENSGALG00000013969 8 0.722 - - - - - 0.722 - - - - aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]
74. PRKD3 ENSGALG00000010612 2 0.722 - - - - - 0.722 - - - - protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]
75. APELA ENSGALG00000023444 3 0.722 - - - - - 0.722 - - - - apelin receptor early endogenous ligand [Source:NCBI gene;Acc:770154]
76. TMEM204 ENSGALG00000029047 8 0.722 - - - - - 0.722 - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
77. SK2 SK2 74 0.722 - - - - - 0.722 - - - -
78. VEPH1 ENSGALG00000009682 51 0.722 - - - - - 0.722 - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
79. SLC6A9 ENSGALG00000010098 5 0.722 - - - - - 0.722 - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
80. KDM1B ENSGALG00000012685 11 0.722 - - - - - 0.722 - - - - lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]
81. QRSL1 ENSGALG00000015338 16 0.722 - - - - - 0.722 - - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
82. HTR2A ENSGALG00000016992 73 0.722 - - - - - 0.722 - - - - Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
83. LMOD1 ENSGALG00000028721 81 0.722 - - - - - 0.722 - - - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
84. EHF ENSGALG00000007817 11 0.722 - - - - - 0.722 - - - - ETS homologous factor [Source:NCBI gene;Acc:425791]
85. EFCAB11 ENSGALG00000020402 16 0.722 - - - - - 0.722 - - - - EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:HGNC:20357]
86. GPR183 ENSGALG00000016881 5 0.722 - - - - - 0.722 - - - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
87. ODF2L ENSGALG00000006804 10 0.722 - - - - - 0.722 - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
88. ENSGALG00000026922 ENSGALG00000026922 3 0.722 - - - - - 0.722 - - - -
89. MOCOS ENSGALG00000013149 25 0.72 - - - - - - - 0.720 - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
90. SPTSSB ENSGALG00000027494 82 0.72 - - - - - - - 0.720 - - serine palmitoyltransferase small subunit B [Source:NCBI gene;Acc:425008]
91. LSM11 ENSGALG00000038954 16 0.716 - - - - - - - 0.716 - - LSM11, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:30860]
92. PEX5 ENSGALG00000014683 17 0.713 - - - - - 0.713 - - - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
93. HSDL1 ENSGALG00000003273 1108 0.709 - - - - - 0.709 - - - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
94. ENSGALG00000027928 ENSGALG00000027928 474 0.708 - - - - - - - 0.708 - -
95. ARHGAP22 ENSGALG00000006137 4 0.704 - - - - 0.704 - - - - - Rho GTPase activating protein 22, transcript variant X3
96. FAM126B ENSGALG00000020869 19 0.704 - - - - 0.704 - - - - - family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
97. HS3ST5 ENSGALG00000026594 44 0.704 - - - - - - - 0.704 - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
98. SPOCK3 ENSGALG00000009568 33 0.704 - - - - 0.704 - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
99. SULT1B ENSGALG00000023122 7 0.704 - - - - 0.704 - - - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
100. ENSGALG00000008599 ENSGALG00000008599 2 0.704 - - - - 0.704 - - - - -

There are 12 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA