Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBFOX1

Gene Name Gene ID Reads Annotation
RBFOX1 ENSGALG00000034325 2133 RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]











Genes with expression patterns similar to RBFOX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBFOX1 ENSGALG00000034325 2133 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
2. MRPS30 ENSGALG00000014874 3416 1.643 - - - 0.938 - - 0.705 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
3. WDR45B ENSGALG00000001563 5870 1.566 - - - 0.814 - - 0.752 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
4. ATR ENSGALG00000002663 4626 1.511 - - - 0.764 - - 0.747 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
5. DBN1 ENSGALG00000033405 216 0.967 - - - 0.967 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
6. KIF6 ENSGALG00000010057 84 0.966 - - - 0.966 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
7. VWDE ENSGALG00000042443 160 0.966 - - - 0.966 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
8. ENSGALG00000027412 ENSGALG00000027412 202 0.966 - - - 0.966 - - - - - -
9. MLH3 ENSGALG00000010304 231 0.965 - - - 0.965 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
10. ZBTB17 ENSGALG00000035352 280 0.964 - - - 0.964 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
11. GFPT2 ENSGALG00000039705 562 0.964 - - - 0.964 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
12. TRIM62 ENSGALG00000028437 5124 0.963 - - - 0.963 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
13. KIAA1432 KIAA1432 1792 0.963 - - - 0.963 - - - - - -
14. TBK1 ENSGALG00000009840 1650 0.962 - - - 0.962 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
15. NECAB3 ENSGALG00000003065 417 0.96 - - - 0.960 - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
16. NCOA3 ENSGALG00000004570 243 0.959 - - - 0.959 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
17. GALNT12 ENSGALG00000013197 1330 0.957 - - - 0.957 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
18. SNORA31 SNORA31 183 0.955 - - - 0.955 - - - - - -
19. ADCY9 ENSGALG00000007779 766 0.955 - - - 0.955 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
20. PASK ENSGALG00000006016 3096 0.953 - - - 0.953 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
21. CA3 CA3 200 0.953 - - - 0.953 - - - - - -
22. FRRS1 ENSGALG00000005418 332 0.952 - - - 0.952 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
23. GUF1 ENSGALG00000014217 211 0.952 - - - 0.952 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
24. PANK1 ENSGALG00000006431 2910 0.947 - - - 0.947 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
25. RNPC3 ENSGALG00000005162 269 0.947 - - - 0.947 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
26. ITPKB ENSGALG00000009068 324 0.945 - - - 0.945 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
27. PRKD1 ENSGALG00000009900 2094 0.944 - - - 0.944 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
28. NUDT4 ENSGALG00000011285 2998 0.944 - - - 0.944 - - - - - - nudix hydrolase 4, transcript variant X5
29. CYP20A1 ENSGALG00000008730 930 0.941 - - - 0.941 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
30. WDR96 WDR96 255 0.94 - - - 0.940 - - - - - -
31. HMHA1 HMHA1 929 0.938 - - - 0.938 - - - - - -
32. VPS13B 2293 0.936 - - - 0.936 - - - - - - vacuolar protein sorting 13 homolog B
33. PDE4B ENSGALG00000011094 1871 0.935 - - - 0.935 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
34. IFT43 ENSGALG00000020415 1218 0.933 - - - 0.933 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
35. LRRCC1 ENSGALG00000039499 480 0.933 - - - 0.933 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
36. DEPDC5 ENSGALG00000006766 1592 0.932 - - - 0.932 - - - - - - DEP domain containing 5, transcript variant X6
37. ASRGL1 ENSGALG00000015949 403 0.932 - - - 0.932 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
38. IRF6 ENSGALG00000001405 3144 0.931 - - - 0.931 - - - - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
39. KIAA1462 1612 0.931 - - - 0.931 - - - - - - KIAA1462, transcript variant X4
40. DPP8 ENSGALG00000007437 1763 0.928 - - - 0.928 - - - - - - dipeptidyl peptidase 8 [Source:HGNC Symbol;Acc:HGNC:16490]
41. NME6 ENSGALG00000038044 1231 0.927 - - - 0.927 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
42. ITGA9 ENSGALG00000029378 415 0.927 - - - 0.927 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
43. MCCC2L ENSGALG00000011255 889 0.927 - - - 0.927 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
44. TMOD1 ENSGALG00000002125 933 0.926 - - - 0.926 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
45. AKT1 ENSGALG00000011620 4089 0.924 - - - 0.924 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
46. ASCC1 ENSGALG00000026019 3583 0.923 - - - 0.923 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
47. TGS1 ENSGALG00000015340 5897 0.923 - - - 0.923 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
48. UTP18 ENSGALG00000002985 7129 0.923 - - - 0.923 - - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
49. NR6A1 ENSGALG00000001073 2071 0.922 - - - 0.922 - - - - - - nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]
50. HPS5 ENSGALG00000027716 2466 0.921 - - - 0.921 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
51. PRDM4 ENSGALG00000012619 876 0.92 - - - 0.920 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
52. MOSPD1 ENSGALG00000006132 8503 0.92 - - - 0.920 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
53. COPA ENSGALG00000009153 11618 0.918 - - - 0.918 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
54. HINT3 ENSGALG00000044342 5674 0.918 - - - 0.918 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
55. CXorf23 1582 0.917 - - - 0.917 - - - - - - chromosome X open reading frame 23, transcript variant X3
56. CHM ENSGALG00000006906 4953 0.917 - - - 0.917 - - - - - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
57. C1orf21 ENSGALG00000020922 4035 0.916 - - - 0.916 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
58. SLC39A9 ENSGALG00000009438 4838 0.915 - - - 0.915 - - - - - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
59. RSBN1 ENSGALG00000001860 761 0.915 - - - 0.915 - - - - - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
60. OVCA2 ENSGALG00000045371 2862 0.914 - - - 0.914 - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
61. ELMOD1 ENSGALG00000017169 2303 0.913 - - - 0.913 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
62. DPY30 ENSGALG00000010621 6818 0.913 - - - 0.913 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
63. BAG5 ENSGALG00000031062 4498 0.912 - - - 0.912 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
64. SUMO1 ENSGALG00000008435 19847 0.911 - - - 0.911 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
65. BTG1L ENSGALG00000004676 2293 0.911 - - - 0.911 - - - - - - protein BTG1-like
66. KIAA1143 ENSGALG00000035952 6735 0.911 - - - 0.911 - - - - - - KIAA1143 [Source:NCBI gene;Acc:420709]
67. MFSD2A ENSGALG00000003879 5455 0.911 - - - 0.911 - - - - - - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
68. PPFIA1 ENSGALG00000035774 5258 0.909 - - - 0.909 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
69. FAM211B FAM211B 3808 0.909 - - - 0.909 - - - - - -
70. NEK7 ENSGALG00000002216 4532 0.907 - - - 0.907 - - - - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
71. DBNDD2 ENSGALG00000003921 8301 0.906 - - - 0.906 - - - - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
72. FIGNL1 ENSGALG00000026363 2194 0.906 - - - 0.906 - - - - - - fidgetin like 1, transcript variant X2
73. C12orf45 C12orf45 2445 0.905 - - - 0.905 - - - - - -
74. MPHOSPH10 ENSGALG00000003906 7029 0.904 - - - 0.904 - - - - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
75. SLC25A32 ENSGALG00000039882 3100 0.902 - - - 0.902 - - - - - - solute carrier family 25 member 32 [Source:NCBI gene;Acc:428377]
76. SCPEP1 ENSGALG00000003185 2322 0.9 - - - 0.900 - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
77. SSR2 ENSGALG00000000764 32190 0.9 - - - 0.900 - - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
78. GAS2L3 ENSGALG00000028373 1452 0.899 - - - 0.899 - - - - - - growth arrest specific 2 like 3 [Source:NCBI gene;Acc:417931]
79. CHCHD3 ENSGALG00000006489 18592 0.899 - - - 0.899 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
80. ABCD2 ENSGALG00000042554 1607 0.899 - - - 0.899 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
81. PM20D1 ENSGALG00000000724 2108 0.898 - - - 0.898 - - - - - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
82. NPL ENSGALG00000004614 617 0.897 - - - 0.897 - - - - - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
83. YARS ENSGALG00000003563 11093 0.896 - - - 0.896 - - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
84. CANX ENSGALG00000032148 11297 0.895 - - - 0.895 - - - - - - calnexin [Source:NCBI gene;Acc:416288]
85. ASPH ENSGALG00000030112 1622 0.893 - - - 0.893 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
86. GTF3C4 ENSGALG00000031016 1221 0.893 - - - 0.893 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
87. ENSGALG00000023608 ENSGALG00000023608 1538 0.893 - - - 0.893 - - - - - -
88. TBCK ENSGALG00000010564 1546 0.89 - - - 0.890 - - - - - - TBC1 domain containing kinase [Source:NCBI gene;Acc:422534]
89. CBX3 ENSGALG00000011038 40977 0.89 - - - 0.890 - - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
90. KIN ENSGALG00000030702 1608 0.89 - - - 0.890 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
91. ENTPD4 ENSGALG00000000390 1394 0.89 - - - 0.890 - - - - - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
92. RAB33B ENSGALG00000009790 2340 0.889 - - - 0.889 - - - - - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
93. RGS7BP ENSGALG00000027389 1414 0.889 - - - 0.889 - - - - - - regulator of G protein signaling 7 binding protein [Source:HGNC Symbol;Acc:HGNC:23271]
94. TRAPPC12 ENSGALG00000016387 2593 0.889 - - - 0.889 - - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
95. KDM2B ENSGALG00000004225 11513 0.888 - - - 0.888 - - - - - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
96. WDYHV1 ENSGALG00000030059 2961 0.888 - - - 0.888 - - - - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
97. TAF9 4097 0.887 - - - 0.887 - - - - - - TATA-box binding protein associated factor 9
98. STRAP ENSGALG00000013092 13100 0.887 - - - 0.887 - - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
99. COG7 ENSGALG00000006156 4072 0.887 - - - 0.887 - - - - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
100. MRPL40 ENSGALG00000001587 20893 0.886 - - - 0.886 - - - - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]

There are 388 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA