Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RBFA

Gene Name Gene ID Reads Annotation
RBFA ENSGALG00000036067 6542 ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]











Genes with expression patterns similar to RBFA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RBFA ENSGALG00000036067 6542 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
2. JKAMP ENSGALG00000012009 5781 0.997 - - - - - - - 0.997 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
3. KIAA0895L 1739 0.997 - - - - - - - 0.997 - - KIAA0895 like, transcript variant X4
4. SCLT1 2397 0.997 - - - - - - - 0.997 - - sodium channel and clathrin linker 1, transcript variant X6
5. ENSGALG00000010034 ENSGALG00000010034 3293 0.997 - - - - - - - 0.997 - -
6. NPFF1 NPFF1 3177 0.997 - - - - - - - 0.997 - -
7. PDCD2L 4843 0.997 - - - - - - - 0.997 - - programmed cell death 2-like
8. CARKD CARKD 2914 0.997 - - - - - - - 0.997 - -
9. GGA3 ENSGALG00000007992 3566 0.997 - - - - - - - 0.997 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
10. MADD ENSGALG00000008181 2273 0.997 - - - - - - - 0.997 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
11. FXN ENSGALG00000015108 1867 0.997 - - - - - - - 0.997 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
12. RNF113A ENSGALG00000000538 3985 0.997 - - - - - - - 0.997 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
13. RRN3 ENSGALG00000041989 3934 0.997 - - - - - - - 0.997 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
14. CHMP5 ENSGALG00000013160 13347 0.997 - - - - - - - 0.997 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
15. UBALD1 ENSGALG00000007619 8536 0.997 - - - - - - - 0.997 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
16. YTHDC2 2266 0.997 - - - - - - - 0.997 - - YTH domain containing 2, transcript variant X3
17. FAM125B FAM125B 2953 0.997 - - - - - - - 0.997 - -
18. TMTC2 ENSGALG00000010975 7040 0.996 - - - - - - - 0.996 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
19. HBXIP HBXIP 8637 0.996 - - - - - - - 0.996 - -
20. NECAP1 ENSGALG00000037656 5181 0.995 - - - - - - - 0.995 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
21. ATL1 ENSGALG00000012339 3789 0.995 - - - - - - - 0.995 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
22. EIF3D ENSGALG00000012529 40887 0.995 - - - - - - - 0.995 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
23. DDX24 ENSGALG00000010884 5485 0.994 - - - - - - - 0.994 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
24. PGM1 ENSGALG00000011016 3391 0.994 - - - - - - - 0.994 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
25. RIC8A ENSGALG00000004191 6094 0.994 - - - - - - - 0.994 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
26. CASP3 ENSGALG00000010638 11572 0.993 - - - - - - - 0.993 - - caspase 3 [Source:NCBI gene;Acc:395476]
27. CHTOP ENSGALG00000042129 24112 0.99 - - - - - - - 0.990 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
28. MMADHC ENSGALG00000012473 9026 0.989 - - - - - - - 0.989 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
29. ARHGAP11A ENSGALG00000009731 6817 0.986 - - - - - - - 0.986 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
30. ORC5 ENSGALG00000008175 3426 0.983 - - - - - - 0.983 - - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
31. VTA1 ENSGALG00000013810 4998 0.983 - - - - - - 0.983 - - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
32. KDELR3 ENSGALG00000032313 4376 0.982 - - - - - - 0.982 - - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
33. WDR77 ENSGALG00000040864 3766 0.982 - - - - - - 0.982 - - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
34. GEMIN5 ENSGALG00000003937 1685 0.981 - - - - - - 0.981 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
35. ZCCHC10 ENSGALG00000036666 5148 0.981 - - - - - - 0.981 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
36. C18H17ORF106 C18H17ORF106 2355 0.981 - - - - - - 0.981 - - -
37. FNTA ENSGALG00000015397 3741 0.981 - - - - - - 0.981 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
38. MORC2 2505 0.98 - - - - - - 0.980 - - - MORC family CW-type zinc finger 2, transcript variant X2
39. DDX54 ENSGALG00000007490 8729 0.98 - - - - - - 0.980 - - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
40. GPATCH2 ENSGALG00000009627 4061 0.98 - - - - - - 0.980 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
41. PISD ENSGALG00000006872 3539 0.98 - - - - - - 0.980 - - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
42. ZFX ENSGALG00000016327 5470 0.98 - - - - - - 0.980 - - - zinc finger protein, X-linked, transcript variant X4
43. GPATCH1 ENSGALG00000004839 6455 0.979 - - - - - - 0.979 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
44. TNFRSF21 ENSGALG00000016719 2762 0.979 - - - - - - 0.979 - - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
45. CMC1 ENSGALG00000025811 3939 0.979 - - - - - - 0.979 - - - C-X9-C motif containing 1
46. SCYL3 ENSGALG00000036264 2935 0.979 - - - - - - 0.979 - - - SCY1 like pseudokinase 3 [Source:NCBI gene;Acc:424396]
47. DCAF4 ENSGALG00000009345 2604 0.979 - - - - - - 0.979 - - - DDB1 and CUL4 associated factor 4
48. TMEM38A ENSGALG00000003778 3867 0.978 - - - - - - 0.978 - - - transmembrane protein 38A [Source:NCBI gene;Acc:771253]
49. MTRF1L ENSGALG00000013609 1581 0.978 - - - - - - 0.978 - - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
50. CCDC43 ENSGALG00000001022 5462 0.978 - - - - - - 0.978 - - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
51. ENSGALG00000006671 ENSGALG00000006671 4194 0.978 - - - - - - 0.978 - - -
52. UBE2K ENSGALG00000014290 2138 0.978 - - - - - - 0.978 - - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
53. TSTA3 ENSGALG00000031525 3391 0.978 - - - - - - 0.978 - - - tissue specific transplantation antigen P35B [Source:NCBI gene;Acc:420292]
54. SLC29A1 ENSGALG00000010182 1522 0.978 - - - - - - 0.978 - - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
55. FAIM ENSGALG00000012082 1209 0.977 - - - - - - 0.977 - - - Fas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]
56. SETD7 ENSGALG00000009800 1230 0.977 - - - - - - 0.977 - - - SET domain containing lysine methyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:30412]
57. TMEM47 ENSGALG00000027198 3619 0.977 - - - - - - 0.977 - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
58. XPC ENSGALG00000006357 2484 0.976 - - - - - - 0.976 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
59. INPP5E ENSGALG00000001964 3580 0.976 - - - - - - 0.976 - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
60. LAMTOR3 ENSGALG00000000055 6311 0.976 - - - - - - 0.976 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:NCBI gene;Acc:425210]
61. PTCHD1 ENSGALG00000016358 3882 0.976 - - - - - - 0.976 - - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
62. TAOK3 ENSGALG00000007396 3094 0.976 - - - - - - 0.976 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
63. HDHD3 ENSGALG00000044101 6333 0.976 - - - - - - 0.976 - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
64. AASDHPPT ENSGALG00000027981 1017 0.976 - - - - - - 0.976 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
65. PXMP4 ENSGALG00000003042 1035 0.975 - - - - - - 0.975 - - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
66. ANXA6 ENSGALG00000004357 2891 0.975 - - - - - - 0.975 - - - annexin A6 [Source:NCBI gene;Acc:395481]
67. F2RL1 ENSGALG00000014984 565 0.975 - - - - - - 0.975 - - - F2R like trypsin receptor 1 [Source:NCBI gene;Acc:427213]
68. SUCO ENSGALG00000003081 4116 0.975 - - - - - - 0.975 - - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
69. GINS1 ENSGALG00000008538 4786 0.975 - - - - - - 0.975 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
70. BECN1 ENSGALG00000002973 1569 0.974 - - - - - - 0.974 - - - beclin 1 [Source:NCBI gene;Acc:420018]
71. NDUFA2 ENSGALG00000040626 27899 0.974 - - - - - - - 0.974 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
72. CWF19L2 ENSGALG00000017171 4590 0.974 - - - - - - 0.974 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
73. BYSL ENSGALG00000003467 7555 0.974 - - - - - - 0.974 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
74. SFXN4 ENSGALG00000009350 3899 0.974 - - - - - - 0.974 - - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
75. SPR ENSGALG00000000067 3456 0.973 - - - - - - 0.973 - - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
76. NFYA ENSGALG00000003247 1894 0.973 - - - - - - 0.973 - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
77. WBP4 ENSGALG00000016949 5858 0.973 - - - - - - 0.973 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
78. BBX ENSGALG00000015353 1281 0.973 - - - - - - 0.973 - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
79. PHKG1 ENSGALG00000002485 15214 0.973 - - - - - - 0.973 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
80. CDK5RAP2 ENSGALG00000041102 4042 0.973 - - - - - - 0.973 - - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
81. SKA3 ENSGALG00000017128 4176 0.973 - - - - - - 0.973 - - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
82. MRPS17 ENSGALG00000002379 30243 0.972 - - - - - - - 0.972 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
83. XRCC2 ENSGALG00000026865 2214 0.972 - - - - - - 0.972 - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
84. EFCAB10 ENSGALG00000045949 514 0.972 - - - - - - 0.972 - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
85. EPS8 295 0.972 - - - - - - 0.972 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X4
86. HS2ST1 ENSGALG00000028423 4153 0.972 - - - - - - 0.972 - - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
87. FBXO45 ENSGALG00000037281 3936 0.972 - - - - - - 0.972 - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
88. STOML2 STOML2 15566 0.972 - - - - - - 0.972 - - -
89. MKI67 ENSGALG00000025996 28136 0.971 - - - - - - 0.971 - - - marker of proliferation Ki-67, transcript variant X3
90. UBE4A ENSGALG00000031134 5851 0.971 - - - - - - 0.971 - - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
91. GKAP1 ENSGALG00000012586 2908 0.97 - - - - - - 0.970 - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
92. INPP5A ENSGALG00000010493 6769 0.97 - - - - - - 0.970 - - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
93. TBC1D19 ENSGALG00000029673 1868 0.969 - - - - - - 0.969 - - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
94. ENSGALG00000026460 ENSGALG00000026460 607 0.969 - - - - - - 0.969 - - -
95. MLC1 ENSGALG00000040038 206 0.968 - - - - - - 0.968 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
96. UTP18 ENSGALG00000002985 7129 0.968 - - - - - - 0.968 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
97. ZNF335 ENSGALG00000041370 4740 0.968 - - - - - - 0.968 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
98. SMC3 ENSGALG00000008585 16618 0.968 - - - - - - - 0.968 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
99. ENSGALG00000001166 ENSGALG00000001166 2013 0.968 - - - - - - 0.968 - - -
100. DNMT3A ENSGALG00000041454 9607 0.967 - - - - - - 0.967 - - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]

There are 192 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA